Literature DB >> 33373520

Quantification of Ni-N-O Bond Angles and NO Activation by X-ray Emission Spectroscopy.

Phan N Phu1, Carlos E Gutierrez1, Subrata Kundu2,3, Dimosthenis Sokaras4, Thomas Kroll4, Timothy H Warren2, S Chantal E Stieber1.   

Abstract

A series of β-diketiminate Ni-NO complexes with a range of NO binding modes and oxidation states were studied by X-ray emission spectroscopy (XES). The results demonstrate that XES can directly probe and distinguish end-on vs side-on NO coordination modes as well as one-electron NO reduction. Density functional theory (DFT) calculations show that the transition from the NO 2s2s σ* orbital has higher intensity for end-on NO coordination than for side-on NO coordination, whereas the 2s2s σ orbital has lower intensity. XES calculations in which the Ni-N-O bond angle was fixed over the range from 80° to 176° suggest that differences in NO coordination angles of ∼10° could be experimentally distinguished. Calculations of Cu nitrite reductase (NiR) demonstrate the utility of XES for characterizing NO intermediates in metalloenzymes. This work shows the capability of XES to distinguish NO coordination modes and oxidation states at Ni and highlights applications in quantifying small molecule activation in enzymes.

Entities:  

Year:  2020        PMID: 33373520      PMCID: PMC9534352          DOI: 10.1021/acs.inorgchem.0c02724

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.436


  47 in total

1.  Insights into the geometric and electronic structure of transition metal centers from valence-to-core X-ray emission spectroscopy.

Authors:  Christopher J Pollock; Serena DeBeer
Journal:  Acc Chem Res       Date:  2015-09-24       Impact factor: 22.384

2.  Erratum: Density-functional approximation for the correlation energy of the inhomogeneous electron gas

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1986-11-15

3.  Two-Color Valence-to-Core X-ray Emission Spectroscopy Tracks Cofactor Protonation State in a Class I Ribonucleotide Reductase.

Authors:  Ryan J Martinie; Elizabeth J Blaesi; J Martin Bollinger; Carsten Krebs; Kenneth D Finkelstein; Christopher J Pollock
Journal:  Angew Chem Int Ed Engl       Date:  2018-09-04       Impact factor: 15.336

4.  Crystal structure of quinol-dependent nitric oxide reductase from Geobacillus stearothermophilus.

Authors:  Yushi Matsumoto; Takehiko Tosha; Andrei V Pisliakov; Tomoya Hino; Hiroshi Sugimoto; Shingo Nagano; Yuji Sugita; Yoshitsugu Shiro
Journal:  Nat Struct Mol Biol       Date:  2012-01-22       Impact factor: 15.369

5.  Kβ Valence to Core X-ray Emission Studies of Cu(I) Binding Proteins with Mixed Methionine - Histidine Coordination. Relevance to the Reactivity of the M- and H-sites of Peptidylglycine Monooxygenase.

Authors:  Vlad Martin-Diaconescu; Kelly N Chacón; Mario Ulises Delgado-Jaime; Dimosthenis Sokaras; Tsu-Chien Weng; Serena DeBeer; Ninian J Blackburn
Journal:  Inorg Chem       Date:  2016-03-11       Impact factor: 5.165

6.  The protonation states of oxo-bridged Mn(IV) dimers resolved by experimental and computational Mn K pre-edge X-ray absorption spectroscopy.

Authors:  Vera Krewald; Benedikt Lassalle-Kaiser; Thaddeus T Boron; Christopher J Pollock; Jan Kern; Martha A Beckwith; Vittal K Yachandra; Vincent L Pecoraro; Junko Yano; Frank Neese; Serena DeBeer
Journal:  Inorg Chem       Date:  2013-10-25       Impact factor: 5.165

7.  Nitrosyl Linkage Isomers: NO Coupling to N2O at a Mononuclear Site.

Authors:  Subrata Kundu; Phan N Phu; Pokhraj Ghosh; Stosh A Kozimor; Jeffery A Bertke; S Chantal E Stieber; Timothy H Warren
Journal:  J Am Chem Soc       Date:  2019-01-16       Impact factor: 15.419

8.  Study of iron dimers reveals angular dependence of valence-to-core X-ray emission spectra.

Authors:  Christopher J Pollock; Kyle M Lancaster; Kenneth D Finkelstein; Serena DeBeer
Journal:  Inorg Chem       Date:  2014-09-11       Impact factor: 5.165

9.  X-ray Absorption and Emission Spectroscopic Studies of [L2Fe2S2](n) Model Complexes: Implications for the Experimental Evaluation of Redox States in Iron-Sulfur Clusters.

Authors:  Joanna K Kowalska; Anselm W Hahn; Antonia Albers; Christine E Schiewer; Ragnar Bjornsson; Frederico A Lima; Franc Meyer; Serena DeBeer
Journal:  Inorg Chem       Date:  2016-04-20       Impact factor: 5.165

10.  Not Guilty on Every Count: The "Non-Innocent" Nitrosyl Ligand in the Framework of IUPAC's Oxidation-State Formalism.

Authors:  Torsten Ampßler; Georg Monsch; Jens Popp; Tobias Riggenmann; Pedro Salvador; Daniel Schröder; Peter Klüfers
Journal:  Angew Chem Int Ed Engl       Date:  2020-05-26       Impact factor: 15.336

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  1 in total

1.  Combining Valence-to-Core X-ray Emission and Cu K-edge X-ray Absorption Spectroscopies to Experimentally Assess Oxidation State in Organometallic Cu(I)/(II)/(III) Complexes.

Authors:  Blaise L Geoghegan; Yang Liu; Sergey Peredkov; Sebastian Dechert; Franc Meyer; Serena DeBeer; George E Cutsail
Journal:  J Am Chem Soc       Date:  2022-01-20       Impact factor: 15.419

  1 in total

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