| Literature DB >> 24144008 |
Guanjun Zhang, Yiping Qu, Siwen Dang, Qi Yang, Bingyin Shi, Peng Hou1.
Abstract
BACKGROUND: Change of mitochondrial DNA (mtDNA) copy number is widely reported in various human cancers, including gastric cancer, and is considered to be an important hallmark of cancers. However, there is remarkably little consensus on the value of variable mtDNA content in the prognostic evaluation of this cancer.Entities:
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Year: 2013 PMID: 24144008 PMCID: PMC4015835 DOI: 10.1186/1746-1596-8-173
Source DB: PubMed Journal: Diagn Pathol ISSN: 1746-1596 Impact factor: 2.644
Clinicopathological characteristics of gastric cancer patients
| Gender | |
| Male | 84 (81.5) |
| Female | 19 (18.5) |
| Age, years | |
| Mean | 58.8 |
| SD | 12.9 |
| Tumor localization | |
| gastric cardia | 20 (19.4) |
| gastric body | 32 (31.1) |
| gastric antrum | 51 (49.5) |
| Tumor size (cm3) | |
| ≤3 | 32 (31.1) |
| 3-5 | 36 (35.0) |
| >5 | 35 (33.9) |
| Differentiation | |
| well/moderate | 48 (46.6) |
| poor/undifferentiation | 55 (53.4) |
| Tumor invasion | |
| T1 | 23 (22.3) |
| T2 | 14 (13.6) |
| T3 | 52 (50.5) |
| T4 | 14 (13.6) |
| TNM stage | |
| I | 9 (8.7) |
| II | 41 (39.8) |
| III | 47 (45.6) |
| IV | 6 (5.8) |
| Lymph node metastasis (LNM) | |
| Yes | 48 (46.6) |
| No | 55 (53.4) |
| No. of LNM | |
| N0 | 55 (53.4) |
| N1 (1–6) | 34 (33.0) |
| N2 (7–15) | 10 (9.7) |
| N3 (≥16) | 4 (3.9) |
| Survival status | |
| Dead | 45 (43.7) |
| Alive | 58 (56.3) |
The primer and TaqMan probe sequences used in this study
| CCCCTAAAACCCGCCACATC | 6FAM-ACCCTCTACATCACCGCCCCGACC-TAMRA | GTAGAAGAGCGATGGTGAGAGC | 93.6 | |
| TCACCCACACTGTGCCCATCTACGA | 6FAM-ATGCCCTCCCCCATGCCATCC-TAMRA | TCGGTGAGGATCTTCATGAGGTA | 95.7 |
Figure 1Copy number of mtDNA corresponding to each individual case of gastric cancers and normal gastric tissues (circle). Real-time quantitative PCR assay was performed to analyze mtDNA copy number in a cohort of gastric cancers and normal gastric tissues. Horizonal lines represent mean ± S.E. Details are as described in Methods. T, tumor tissues; N, normal gastric tissues.
Figure 2Association of mtDNA copy number with clinicopathological characteristics in gastric cancer. Copy number of mtDNA was analyzed using real-time quantitative PCR approach. The circle represents mtDNA copy number of each case of gastric cancers. Horizonal lines represent mean ± S.E. Sample means were compared using the Mann–Whitney U test. Details are as described in Methods. F, female; M, male; GC, gastric cardia; GA, gastric antrum; GB, gastric body; Well, well/moderate differentiation; Poor, poor/undifferentiation; N, non-lymph node metastasis; Y, lymph node metastasis; ES, early-stage; LS, late-stage.
Copy number variations of mtDNA in gastric cancer — univariate associations with clinicopathological characteristics
| | | |||
|---|---|---|---|---|
| Male | 1.55 (0.42-5.70) | 0.51 | 1.75 (0.37-8.30) | 0.48 |
| Age1 | 1.00 (0.65-1.52) | 0.98 | 1.10 (0.67-1.79) | 0.71 |
| Tumor localization2 | 1.11 (0.51-2.42) | 0.80 | 1.22 (0.50-2.99) | 0.66 |
| Tumor size3 | 1.31 (0.66-2.60) | 0.45 | 1.37 (0.63-3.01) | 0.43 |
| Differentiation4 | 1.78 (0.58-5.49) | 0.32 | 1.11 (0.31-4.04) | 0.87 |
| Tumor invasion5 | 0.82 (0.46-1.47) | 0.50 | 0.69 (0.36-1.34) | 0.27 |
| TNM stage6 | 0.84 (0.40-1.78) | 0.65 | 0.86 (0.36-2.03) | 0.73 |
| Lymph node metastasis | 4.93 (1.28-19.04) | 0.02 | 4.00 (0.91-17.58) | 0.07 |
| Survival status7 | 1.20 (0.39-3.73) | 0.75 | 1.81 (0.50-6.50) | 0.37 |
*OR: odds ratio with 95% confidence interval; 1Age (per 10 years); 2Tumor localization (gastric cardia; gastric body; gastric antrum); 3Tumor size (≤3 cm; >3 cm and ≤5 cm; >5 cm); 4Differentiation (well or moderate; poor or undifferentiation); 5Tumor invasion (T1; T2; T3; T4); 6TNM stage (I; II; III; IV); 7Survival status (Alive vs. Dead). The cases with 3.61-5.35 mtDNA copies were used as reference.
Copy number variations of mtDNA in early-stage gastric cancer — univariate associations with clinicopathological characteristics
| | | |||
|---|---|---|---|---|
| Male | 1.16 (0.11-12.13) | 0.90 | 0.80 (0.06-11.30) | 0.87 |
| Age1 | 0.48 (0.05-4.65) | 0.53 | 0.20 (0.02-2.39) | 0.20 |
| Tumor localization2 | 3.65 (0.91-14.64) | 0.07 | 2.78 (0.59-13.0) | 0.19 |
| Tumor size3 | 0.80 (0.24-2.65) | 0.71 | 0.56 (0.13-2.32) | 0.42 |
| Tumor invasion4 | 0.49 (0.16-1.49) | 0.21 | 0.28 (0.08-0.99) | 0.049 |
| Lymph node metastasis | 1.09 (0.17-6.85) | 0.93 | 0.86 (0.10-7.51) | 0.90 |
| Survival status5 | 0.42 (0.07-2.43) | 0.33 | 0.25 (0.03-2.32) | 0.22 |
*OR: odds ratio with 95% confidence interval; 1Age (per 10 years); 2Tumor localization (gastric cardia; gastric body; gastric antrum); 3Tumor size (≤3 cm; >3 cm and ≤5 cm; >5 cm); 4Tumor invasion (T1; T2; T3; T4); 5Survival status (Alive vs. Dead). The cases with 3.61-5.35 mtDNA copies were used as reference.
Copy number variations of mtDNA in late-stage gastric cancer — univariate associations with clinicopathological characteristics
| | | |||
|---|---|---|---|---|
| Male | 1.57 (0.31-7.99) | 0.59 | 2.79 (0.37-20.82) | 0.32 |
| Age1 | 0.67 (0.15-2.89) | 0.59 | 1.33 (0.25-7.01) | 0.73 |
| Tumor localization2 | 0.44 (0.13-1.45) | 0.18 | 0.70 (0.19-2.616) | 0.60 |
| Tumor size3 | 1.86 (0.78-4.42) | 0.16 | 2.10 (0.79-5.57) | 0.14 |
| Tumor invasion4 | 1.13 (0.53-2.41) | 0.74 | 1.16 (0.50-2.69) | 0.73 |
| Lymph node metastasis | 27.00 (2.89-252.62) | 0.004 | 13.50 (1.34-135.98) | 0.03 |
| Survival status5 | 3.11 (0.66-14.60) | 0.15 | 6.42 (1.09-37.74) | 0.04 |
*OR: odds ratio with 95% confidence interval; 1Age (per 10 years); 2Tumor localization (gastric cardia; gastric body; gastric antrum); 3Tumor size (≤3 cm; >3 cm and ≤5 cm; >5 cm); 4Tumor invasion (T1; T2; T3; T4); 5Survival status (Alive vs. Dead). The cases with 3.61-5.35 mtDNA copies were used as reference.
Copy number variations in gastric cancer — multivariable models assessing age, tumor size, differentiation and lymph node metastasis
| | | |||
|---|---|---|---|---|
| Age1 | 0.80 (0.49-1.31) | 0.38 | 0.96 (0.56-1.65) | 0.89 |
| Tumor size2 | 0.91 (0.43-1.92) | 0.80 | 1.04 (0.46-2.36) | 0.92 |
| Differentiation3 | 3.00 (0.86-10.47) | 0.08 | 1.56 (0.39-6.19) | 0.53 |
| Lymph node metastasis | 7.63 (1.63-35.69) | 0.01 | 4.41 (0.84-23.12) | 0.08 |
*OR: odds ratio with 95% confidence interval; 1Age (per 10 years); 2Tumor size (≤3 cm; >3 cm and ≤5 cm; >5 cm); 3Differentiation (well or moderate; poor or undifferentiation). The cases with 3.61-5.35 mtDNA copies were used as reference.
Prognostic value of clinicopathological factors and copy number variation of mtDNA in univariate and multivariate Cox regression analysis (n=103)
| | ||||
|---|---|---|---|---|
| Copy number | | | | |
| 3.61~5.35 | 1.00 (reference) | | 1.00 (reference) | |
| <3.61 | 1.51 (0.44-2.57) | 0.90 | 0.52 (0.20-1.38) | 0.19 |
| >5.35 | 1.53 (0.58-4.02) | 0.39 | 1.07 (0.37-3.07) | 0.90 |
| The number of lymph node metastasis | | | | |
| 0 | 1.00 (reference) | | 1.00 (reference) | |
| 1~6 | 6.86 (3.18-14.91) | <0.001 | 7.28 (2.87-18.49) | <0.001 |
| 7~15 | 6.41 (2.70-15.25) | <0.001 | 4.68 (1.65-13.28) | 0.004 |
| ≥16 | 16.75 (5.05-55.56) | <0.001 | 13.21 (3.33-52.45) | <0.001 |
| Tumor invasion | | | | |
| T1 | 1.00 (reference) | | 1.00 (reference) | |
| T2 | 0.85 (0.16-4.67) | 0.86 | 0.63 (0.11-3.54) | 0.60 |
| T3 | 4.36 (1.53-12.42) | 0.006 | 1.51 (0.46-4.92) | 0.49 |
| T4 | 2.66 (1.30-5.48) | 0.001 | 3.33 (0.92-12.14) | 0.07 |
| Differentiation | | | | |
| Well/moderate | 1.00 (reference) | | 1.00 (reference) | |
| Poor/undifferentiation | 2.22 (1.19-4.19) | 0.01 | 1.82 (0.86-3.82) | 0.12 |
Figure 3The effect of variable mtDNA content on poor survival of gastric cancer patients. Kaplan-Meier analysis of survival was performed according to copy number variations of mtDNA in a large cohort of gastric cancers. Kaplan-Meier survival curves show that variable (decreased or increased) mtDNA content was not associated with overall survival of the patients. However, when the data were stratified further based on the TNM tumor stage, increased mtDNA content (>5.35 copies) was strongly associated with worse survival in the patients who had late-stage tumors.