Literature DB >> 24092954

Automatic and Quantitative Measurement of Collagen Gel Contraction Using Model-Guided Segmentation.

Hsin-Chen Chen1, Tai-Hua Yang, Andrew R Thoreson, Chunfeng Zhao, Peter C Amadio, Yung-Nien Sun, Fong-Chin Su, Kai-Nan An.   

Abstract

Quantitative measurement of collagen gel contraction plays a critical role in the field of tissue engineering because it provides spatial-temporal assessment (e.g., changes of gel area and diameter during the contraction process) reflecting the cell behaviors and tissue material properties. So far the assessment of collagen gels relies on manual segmentation, which is time-consuming and suffers from serious intra- and inter-observer variability. In this study, we propose an automatic method combining various image processing techniques to resolve these problems. The proposed method first detects the maximal feasible contraction range of circular references (e.g., culture dish) and avoids the interference of irrelevant objects in the given image. Then, a three-step color conversion strategy is applied to normalize and enhance the contrast between the gel and background. We subsequently introduce a deformable circular model (DCM) which utilizes regional intensity contrast and circular shape constraint to locate the gel boundary. An adaptive weighting scheme was employed to coordinate the model behavior, so that the proposed system can overcome variations of gel boundary appearances at different contraction stages. Two measurements of collagen gels (i.e., area and diameter) can readily be obtained based on the segmentation results. Experimental results, including 120 gel images for accuracy validation, showed high agreement between the proposed method and manual segmentation with an average dice similarity coefficient larger than 0.95. The results also demonstrated obvious improvement in gel contours obtained by the proposed method over two popular, generic segmentation methods.

Entities:  

Keywords:  Collagen Gel Contraction; Color Conversion; Deformable Circular Model; Gel Segmentation; Quantitative Measurement

Year:  2013        PMID: 24092954      PMCID: PMC3786395          DOI: 10.1088/0957-0233/24/8/085702

Source DB:  PubMed          Journal:  Meas Sci Technol        ISSN: 0957-0233            Impact factor:   2.046


  17 in total

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4.  A new technique to study the mechanical properties of collagen lattices.

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Journal:  J Biomech       Date:  1992-01       Impact factor: 2.712

5.  Active contours without edges.

Authors:  T F Chan; L A Vese
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Journal:  Acad Radiol       Date:  2004-02       Impact factor: 3.173

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  6 in total

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Authors:  Tai-Hua Yang; Andrew R Thoreson; Anne Gingery; Dirk R Larson; Sandra M Passe; Kai-Nan An; Chunfeng Zhao; Peter C Amadio
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4.  Investigating Fibroblast-Induced Collagen Gel Contraction Using a Dynamic Microscale Platform.

Authors:  Tianzi Zhang; John H Day; Xiaojing Su; Arthur G Guadarrama; Nathan K Sandbo; Stephane Esnault; Loren C Denlinger; Erwin Berthier; Ashleigh B Theberge
Journal:  Front Bioeng Biotechnol       Date:  2019-08-14

5.  Clinical and pathological correlates of severity classifications in trigger fingers based on computer-aided image analysis.

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6.  Triamcinolone Acetonide affects TGF-β signaling regulation of fibrosis in idiopathic carpal tunnel syndrome.

Authors:  Tai-Hua Yang; Anne Gingery; Andrew R Thoreson; Dirk R Larson; Chunfeng Zhao; Peter C Amadio
Journal:  BMC Musculoskelet Disord       Date:  2018-09-22       Impact factor: 2.362

  6 in total

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