Literature DB >> 2408012

Interaction of a selenocysteine-incorporating tRNA with elongation factor Tu from E.coli.

C Förster1, G Ott, K Forchhammer, M Sprinzl.   

Abstract

Selenocysteine-incorporating tRNA(Sec)(UCA), the product of selC, was isolated from E.coli and aminoacylated with serine. The equilibrium dissociation constant for the interaction of Ser-tRNA(Sec)(UCA) with elongation factor Tu.GTP was determined to be 5.0 +/- 2.5 x 10(-8) M. Compared with the dissociation constants of the two elongator Ser-tRNA(Ser) species (Kd = 7 x 10(-10) M), the selenocysteine-incorporating UGA suppressor tRNA has an almost hundred fold weaker affinity for EF-Tu.GTP. This suggests a mechanism by which the Ser-tRNA(Sec) is prevented in recognition of UGA codons. This tRNA is not bound to EF-Tu.GTP and is converted to selenocysteinyl-tRNA(Sec). We also demonstrate the lack of an efficient interaction of Sec-tRNA(Sec)(UCA) with EF-Tu.GTP. The results of this work are in support of a mechanism by which the selenocysteine incorporation at UGA nonsense codons is mediated by an elongation factor other than EF-Tu.GTP.

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Year:  1990        PMID: 2408012      PMCID: PMC333452          DOI: 10.1093/nar/18.3.487

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  16 in total

1.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; T Hartmann; J Weber; J Blank; R Zeidler
Journal:  Nucleic Acids Res       Date:  1989       Impact factor: 16.971

2.  Interaction of elongation factor Tu from Escherichia coli with aminoacyl-tRNA carrying a fluorescent reporter group on the 3' terminus.

Authors:  G Ott; H G Faulhammer; M Sprinzl
Journal:  Eur J Biochem       Date:  1989-09-15

3.  Gene for a novel tRNA species that accepts L-serine and cotranslationally inserts selenocysteine.

Authors:  W Leinfelder; E Zehelein; M A Mandrand-Berthelot; A Böck
Journal:  Nature       Date:  1988-02-25       Impact factor: 49.962

4.  Studies on the fluorescence of the Y base of yeast phenylalanine transfer ribonucleic acid. Effect of pH, aminoacylation, and interaction with elongation factor Tu.

Authors:  L Beres; J Lucas-Lenard
Journal:  Biochemistry       Date:  1973-09-25       Impact factor: 3.162

5.  Separation of transfer ribonucleic acid by sepharose chromatography using reverse salt gradients.

Authors:  W M Holmes; R E Hurd; B R Reid; R A Rimerman; G W Hatfield
Journal:  Proc Natl Acad Sci U S A       Date:  1975-03       Impact factor: 11.205

6.  A simplified procedure for the isolation of bacterial polypeptide elongation factor EF-Tu.

Authors:  R Leberman; B Antonsson; R Giovanelli; R Guariguata; R Schumann; A Wittinghofer
Journal:  Anal Biochem       Date:  1980-05-01       Impact factor: 3.365

7.  Cotranslational insertion of selenocysteine into formate dehydrogenase from Escherichia coli directed by a UGA codon.

Authors:  F Zinoni; A Birkmann; W Leinfelder; A Böck
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

8.  Occurrence in vivo of selenocysteyl-tRNA(SERUCA) in Escherichia coli. Effect of sel mutations.

Authors:  W Leinfelder; T C Stadtman; A Böck
Journal:  J Biol Chem       Date:  1989-06-15       Impact factor: 5.157

9.  The selenocysteine-inserting opal suppressor serine tRNA from E. coli is highly unusual in structure and modification.

Authors:  A Schön; A Böck; G Ott; M Sprinzl; D Söll
Journal:  Nucleic Acids Res       Date:  1989-09-25       Impact factor: 16.971

10.  Kinetic studies of Escherichia coli elongation factor Tu-guanosine 5'-triphosphate-aminoacyl-tRNA complexes.

Authors:  A Louie; F Jurnak
Journal:  Biochemistry       Date:  1985-11-05       Impact factor: 3.162

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  18 in total

1.  Dynamics and efficiency in vivo of UGA-directed selenocysteine insertion at the ribosome.

Authors:  S Suppmann; B C Persson; A Böck
Journal:  EMBO J       Date:  1999-04-15       Impact factor: 11.598

2.  Atypical archaeal tRNA pyrrolysine transcript behaves towards EF-Tu as a typical elongator tRNA.

Authors:  Anne Théobald-Dietrich; Magali Frugier; Richard Giegé; Joëlle Rudinger-Thirion
Journal:  Nucleic Acids Res       Date:  2004-02-10       Impact factor: 16.971

Review 3.  Eucaryotic codes.

Authors:  F Caron
Journal:  Experientia       Date:  1990-12-01

4.  Selenocysteine tRNA-specific elongation factor SelB is a structural chimaera of elongation and initiation factors.

Authors:  Marc Leibundgut; Christian Frick; Martin Thanbichler; August Böck; Nenad Ban
Journal:  EMBO J       Date:  2004-12-23       Impact factor: 11.598

5.  Crystallization and preliminary X-ray diffraction analysis of a tRNASer acceptor-stem microhelix.

Authors:  Charlotte Förster; Norbert Krauss; Arnd B E Brauer; Karol Szkaradkiewicz; Svenja Brode; Klaus Hennig; Jens P Fürste; Markus Perbandt; Christian Betzel; Volker A Erdmann
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-05-31

6.  Mutagenesis of selC, the gene for the selenocysteine-inserting tRNA-species in E. coli: effects on in vivo function.

Authors:  C Baron; J Heider; A Böck
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

Review 7.  The molecular biology of selenocysteine.

Authors:  Jonathan N Gonzalez-Flores; Sumangala P Shetty; Aditi Dubey; Paul R Copeland
Journal:  Biomol Concepts       Date:  2013-08

8.  The pathway to GTPase activation of elongation factor SelB on the ribosome.

Authors:  Niels Fischer; Piotr Neumann; Lars V Bock; Cristina Maracci; Zhe Wang; Alena Paleskava; Andrey L Konevega; Gunnar F Schröder; Helmut Grubmüller; Ralf Ficner; Marina V Rodnina; Holger Stark
Journal:  Nature       Date:  2016-11-14       Impact factor: 49.962

Review 9.  On elongation factor eEFSec, its role and mechanism during selenium incorporation into nascent selenoproteins.

Authors:  Miljan Simonović; Anupama K Puppala
Journal:  Biochim Biophys Acta Gen Subj       Date:  2018-03-17       Impact factor: 3.770

10.  Crystal structure of human selenocysteine tRNA.

Authors:  Yuzuru Itoh; Shiho Chiba; Shun-Ichi Sekine; Shigeyuki Yokoyama
Journal:  Nucleic Acids Res       Date:  2009-08-19       Impact factor: 16.971

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