Literature DB >> 24067415

Wright-Fisher dynamics on adaptive landscape.

Shuyun Jiao, Song Xu, Pengyao Jiang, Bo Yuan, Ping Ao.   

Abstract

Adaptive landscape, proposed by Sewall Wright, has provided a conceptual framework to describe dynamical behaviours. However, it is still a challenge to explicitly construct such a landscape, and apply it to quantify interesting evolutionary processes. This is particularly true for neutral evolution. In this work, the authors study one-dimensional Wright Fisher process, and analytically obtain an adaptive landscape as a potential function. They provide the complete characterisation for dynamical behaviours of all possible mutation rates under the influence of mutation and random drift. This same analysis has been applied to situations with additive selection and random drift for all possible selection rates. The critical state dividing the basins of two stable states is directly obtained by the landscape. In addition, the landscape is able to handle situations with pure random drift, which would be non-normalisable for its stationary distribution. The nature of non-normalisation is from the singularity of adaptive landscape. In addition, they propose a new type of neutral evolution. It has the same probability for all possible states. The new type of neutral evolution describes the non-neutral alleles with 0%. They take the equal effect of mutation and random drift as an example.

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Year:  2013        PMID: 24067415      PMCID: PMC8687433          DOI: 10.1049/iet-syb.2012.0058

Source DB:  PubMed          Journal:  IET Syst Biol        ISSN: 1751-8849            Impact factor:   1.615


  24 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

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Authors:  Da Zhou; Hong Qian
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Authors:  N H Barton; H P de Vladar
Journal:  Genetics       Date:  2008-12-15       Impact factor: 4.562

6.  Potential landscape and flux framework of nonequilibrium networks: robustness, dissipation, and coherence of biochemical oscillations.

Authors:  Jin Wang; Li Xu; Erkang Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-21       Impact factor: 11.205

7.  The potential and flux landscape theory of evolution.

Authors:  Feng Zhang; Li Xu; Kun Zhang; Erkang Wang; Jin Wang
Journal:  J Chem Phys       Date:  2012-08-14       Impact factor: 3.488

Review 8.  Colloquium papers: Adaptive landscapes and protein evolution.

Authors:  Maurício Carneiro; Daniel L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-30       Impact factor: 11.205

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Authors:  S Gavrilets
Journal:  Trends Ecol Evol       Date:  1997-08       Impact factor: 17.712

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Authors:  A Prügel-Bennett
Journal:  J Theor Biol       Date:  1997-03-07       Impact factor: 2.691

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