Literature DB >> 24064499

Desulfuration of 2-thiouridine with hydrogen peroxide in the physiological pH range 6.6-7.6 is pH-dependent and results in two distinct products.

Elzbieta Sochacka1, Paulina Bartos, Karina Kraszewska, Barbara Nawrot.   

Abstract

The 2-thiomodified nucleosides, located at first position of tRNAs anticodon, may constitute a primary target for oxidative attack under conditions of oxidative stress. Desulfuration of 2-thiouridine (S2U) was investigated in the (1)H NMR scale in the presence of 100mM H2O2 and phosphate buffer in the physiological pH range, from pH 6.6 to 7.6. The obtained data demonstrate an intriguing result that within one unit of the pH range uridine is the major product of the S2U desulfuration in the pH 7.6, while the 4-pyrimidinone nucleoside (H2U) is dominant in pH 6.6. The possible desulfuration pathway and the biological importance of the transformation of S2U either to U or H2U are discussed in the context of the tRNA oxidative damage.
Copyright © 2013 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  2-Thiouridine; Desulfuration; Modified nucleoside; Oxidative stress; tRNA

Mesh:

Substances:

Year:  2013        PMID: 24064499     DOI: 10.1016/j.bmcl.2013.08.114

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  14 in total

1.  The Effects of Ultraviolet Radiation on Nucleoside Modifications in RNA.

Authors:  Congliang Sun; Manasses Jora; Beulah Solivio; Patrick A Limbach; Balasubrahmanyam Addepalli
Journal:  ACS Chem Biol       Date:  2018-02-05       Impact factor: 5.100

2.  Comparison of the redox chemistry of sulfur- and selenium-containing analogs of uracil.

Authors:  N Connor Payne; Andrew Geissler; Aileen Button; Alexandru R Sasuclark; Alayne L Schroll; Erik L Ruggles; Vadim N Gladyshev; Robert J Hondal
Journal:  Free Radic Biol Med       Date:  2017-01-17       Impact factor: 7.376

3.  2-Thiouracil deprived of thiocarbonyl function preferentially base pairs with guanine rather than adenine in RNA and DNA duplexes.

Authors:  Elzbieta Sochacka; Roman H Szczepanowski; Marek Cypryk; Milena Sobczak; Magdalena Janicka; Karina Kraszewska; Paulina Bartos; Anna Chwialkowska; Barbara Nawrot
Journal:  Nucleic Acids Res       Date:  2015-02-17       Impact factor: 16.971

4.  Different Oxidation Pathways of 2-Selenouracil and 2-Thiouracil, Natural Components of Transfer RNA.

Authors:  Katarzyna Kulik; Klaudia Sadowska; Ewelina Wielgus; Barbara Pacholczyk-Sienicka; Elzbieta Sochacka; Barbara Nawrot
Journal:  Int J Mol Sci       Date:  2020-08-19       Impact factor: 5.923

Review 5.  Synthesis of Nucleobase-Modified RNA Oligonucleotides by Post-Synthetic Approach.

Authors:  Karolina Bartosik; Katarzyna Debiec; Anna Czarnecka; Elzbieta Sochacka; Grazyna Leszczynska
Journal:  Molecules       Date:  2020-07-23       Impact factor: 4.411

Review 6.  Nucleoside modifications in the regulation of gene expression: focus on tRNA.

Authors:  Markus Duechler; Grażyna Leszczyńska; Elzbieta Sochacka; Barbara Nawrot
Journal:  Cell Mol Life Sci       Date:  2016-04-19       Impact factor: 9.261

7.  Selective prebiotic conversion of pyrimidine and purine anhydronucleosides into Watson-Crick base-pairing arabino-furanosyl nucleosides in water.

Authors:  Samuel J Roberts; Rafał Szabla; Zoe R Todd; Shaun Stairs; Dejan-Krešimir Bučar; Jiří Šponer; Dimitar D Sasselov; Matthew W Powner
Journal:  Nat Commun       Date:  2018-10-04       Impact factor: 14.919

8.  Recent Advances in Our Understanding of the Biosynthesis of Sulfur Modifications in tRNAs.

Authors:  Naoki Shigi
Journal:  Front Microbiol       Date:  2018-11-01       Impact factor: 5.640

9.  Characterization of UVA-Induced Alterations to Transfer RNA Sequences.

Authors:  Congliang Sun; Patrick A Limbach; Balasubrahmanyam Addepalli
Journal:  Biomolecules       Date:  2020-11-08

Review 10.  Extracurricular Functions of tRNA Modifications in Microorganisms.

Authors:  Ashley M Edwards; Maame A Addo; Patricia C Dos Santos
Journal:  Genes (Basel)       Date:  2020-08-07       Impact factor: 4.096

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