Literature DB >> 28108278

Comparison of the redox chemistry of sulfur- and selenium-containing analogs of uracil.

N Connor Payne1, Andrew Geissler1, Aileen Button1, Alexandru R Sasuclark2, Alayne L Schroll2, Erik L Ruggles1, Vadim N Gladyshev3, Robert J Hondal4.   

Abstract

Selenium is present in proteins in the form of selenocysteine, where this amino acid serves catalytic oxidoreductase functions. The use of selenocysteine in nature is strongly associated with redox catalysis. However, selenium is also found in a 2-selenouridine moiety at the wobble position of tRNAGlu, tRNAGln and tRNALys. It is thought that the modifications of the wobble position of the tRNA improves the selectivity of the codon-anticodon pair as a result of the physico-chemical changes that result from substitution of sulfur and selenium for oxygen. Both selenocysteine and 2-selenouridine have widespread analogs, cysteine and thiouridine, where sulfur is used instead. To examine the role of selenium in 2-selenouridine, we comparatively analyzed the oxidation reactions of sulfur-containing 2-thiouracil-5-carboxylic acid (s2c5Ura) and its selenium analog 2-selenouracil-5-carboxylic acid (se2c5Ura) using 1H-NMR spectroscopy, 77Se-NMR spectroscopy, and liquid chromatography-mass spectrometry. Treatment of s2c5Ura with hydrogen peroxide led to oxidized intermediates, followed by irreversible desulfurization to form uracil-5-carboxylic acid (c5Ura). In contrast, se2c5Ura oxidation resulted in a diselenide intermediate, followed by conversion to the seleninic acid, both of which could be readily reduced by ascorbate and glutathione. Glutathione and ascorbate only minimally prevented desulfurization of s2c5Ura, whereas very little deselenization of se2c5Ura occurred in the presence of the same antioxidants. In addition, se2c5Ura but not s2c5Ura showed glutathione peroxidase activity, further suggesting that oxidation of se2c5Ura is readily reversible, while oxidation of s2c5Ura is not. The results of the study of these model nucleobases suggest that the use of 2-selenouridine is related to resistance to oxidative inactivation that otherwise characterizes 2-thiouridine. As the use of selenocysteine in proteins also confers resistance to oxidation, our findings suggest a common mechanism for the use of selenium in biology.
Copyright © 2017. Published by Elsevier Inc.

Entities:  

Keywords:  Oxidative stress; Selenocysteine; Selenouridine; Signaling; Thiouridine

Mesh:

Substances:

Year:  2017        PMID: 28108278      PMCID: PMC5328918          DOI: 10.1016/j.freeradbiomed.2017.01.028

Source DB:  PubMed          Journal:  Free Radic Biol Med        ISSN: 0891-5849            Impact factor:   7.376


  41 in total

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Authors:  Estella M Gustilo; Franck Ap Vendeix; Paul F Agris
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Review 2.  Codon-biased translation can be regulated by wobble-base tRNA modification systems during cellular stress responses.

Authors:  Lauren Endres; Peter C Dedon; Thomas J Begley
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

3.  5-(carboxymethylaminomethyl)-2-thiouridine, a new modified nucleoside found at the first letter position of the anticodon.

Authors:  Y Yamada; K Murao; H Ishikura
Journal:  Nucleic Acids Res       Date:  1981-04-24       Impact factor: 16.971

4.  Desulfurization of 2-thiouracil nucleosides: conformational studies of 4-pyrimidinone nucleosides.

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Journal:  Bioorg Med Chem       Date:  2011-04-01       Impact factor: 3.641

5.  Functional diversity of the rhodanese homology domain: the Escherichia coli ybbB gene encodes a selenophosphate-dependent tRNA 2-selenouridine synthase.

Authors:  Matt D Wolfe; Farzana Ahmed; Gerard M Lacourciere; Charles T Lauhon; Thressa C Stadtman; Timothy J Larson
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Review 6.  Why Nature Chose Selenium.

Authors:  Hans J Reich; Robert J Hondal
Journal:  ACS Chem Biol       Date:  2016-03-21       Impact factor: 5.100

7.  Selenols are resistant to irreversible modification by HNO.

Authors:  Christopher L Bianco; Cathy D Moore; Jon M Fukuto; John P Toscano
Journal:  Free Radic Biol Med       Date:  2016-07-14       Impact factor: 7.376

Review 8.  tRNA modifications regulate translation during cellular stress.

Authors:  Chen Gu; Thomas J Begley; Peter C Dedon
Journal:  FEBS Lett       Date:  2014-10-07       Impact factor: 4.124

9.  Facile desulfurization of cyclic thioureas by hydrogen peroxide in acetic acid.

Authors:  S Grivas; E Ronne
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10.  Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins.

Authors:  Clement T Y Chan; Yan Ling Joy Pang; Wenjun Deng; I Ramesh Babu; Madhu Dyavaiah; Thomas J Begley; Peter C Dedon
Journal:  Nat Commun       Date:  2012-07-03       Impact factor: 14.919

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  10 in total

Review 1.  Selenium versus sulfur: Reversibility of chemical reactions and resistance to permanent oxidation in proteins and nucleic acids.

Authors:  Michael J Maroney; Robert J Hondal
Journal:  Free Radic Biol Med       Date:  2018-03-26       Impact factor: 7.376

2.  Can dimedone be used to study selenoproteins? An investigation into the reactivity of dimedone toward oxidized forms of selenocysteine.

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3.  Targeting Glutathione and Cystathionine β-Synthase in Ovarian Cancer Treatment by Selenium-Chrysin Polyurea Dendrimer Nanoformulation.

Authors:  Inês Santos; Cristiano Ramos; Cindy Mendes; Catarina O Sequeira; Catarina S Tomé; Dalila G H Fernandes; Pedro Mota; Rita F Pires; Donato Urso; Ana Hipólito; Alexandra M M Antunes; João B Vicente; Sofia A Pereira; Vasco D B Bonifácio; Sofia C Nunes; Jacinta Serpa
Journal:  Nutrients       Date:  2019-10-19       Impact factor: 5.717

4.  Different Oxidation Pathways of 2-Selenouracil and 2-Thiouracil, Natural Components of Transfer RNA.

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Review 5.  Oxidative Modifications of RNA and Its Potential Roles in Biosystem.

Authors:  Mikiei Tanaka; P Boon Chock
Journal:  Front Mol Biosci       Date:  2021-05-12

Review 6.  Historical Roles of Selenium and Selenoproteins in Health and Development: The Good, the Bad and the Ugly.

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Journal:  Int J Mol Sci       Date:  2021-12-21       Impact factor: 5.923

7.  Radiation-Induced Oxidation Reactions of 2-Selenouracil in Aqueous Solutions: Comparison with Sulfur Analog of Uracil.

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8.  2-Selenouridine, a Modified Nucleoside of Bacterial tRNAs, Its Reactivity in the Presence of Oxidizing and Reducing Reagents.

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9.  Oxidation of 5-methylaminomethyl uridine (mnm⁵U) by Oxone Leads to Aldonitrone Derivatives.

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10.  Optimized Biocatalytic Synthesis of 2-Selenopyrimidine Nucleosides by Transglycosylation*.

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Journal:  Chembiochem       Date:  2021-03-31       Impact factor: 3.164

  10 in total

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