Literature DB >> 30287815

Selective prebiotic conversion of pyrimidine and purine anhydronucleosides into Watson-Crick base-pairing arabino-furanosyl nucleosides in water.

Samuel J Roberts1, Rafał Szabla2,3, Zoe R Todd4, Shaun Stairs1, Dejan-Krešimir Bučar1, Jiří Šponer3, Dimitar D Sasselov4, Matthew W Powner5.   

Abstract

Prebiotic nucleotide synthesis is crucial to understanding the origins of life on Earth. There are numerous candidates for life's first nucleic acid, however, currently no prebiotic method to selectively and concurrently synthesise the canonical Watson-Crick base-pairing pyrimidine (C, U) and purine (A, G) nucleosides exists for any genetic polymer. Here, we demonstrate the divergent prebiotic synthesis of arabinonucleic acid (ANA) nucleosides. The complete set of canonical nucleosides is delivered from one reaction sequence, with regiospecific glycosidation and complete furanosyl selectivity. We observe photochemical 8-mercaptopurine reduction is efficient for the canonical purines (A, G), but not the non-canonical purine inosine (I). Our results demonstrate that synthesis of ANA may have been facile under conditions that comply with plausible geochemical environments on early Earth and, given that ANA is capable of encoding RNA/DNA compatible information and evolving to yield catalytic ANA-zymes, ANA may have played a critical role during the origins of life.

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Year:  2018        PMID: 30287815      PMCID: PMC6172253          DOI: 10.1038/s41467-018-06374-z

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  46 in total

1.  Chemical etiology of nucleic acid structure: the alpha-threofuranosyl-(3'-->2') oligonucleotide system.

Authors:  K Schöning; P Scholz; S Guntha; X Wu; R Krishnamurthy; A Eschenmoser
Journal:  Science       Date:  2000-11-17       Impact factor: 47.728

2.  Glycosylation of a model proto-RNA nucleobase with non-ribose sugars: implications for the prebiotic synthesis of nucleosides.

Authors:  David M Fialho; Kimberly C Clarke; Megan K Moore; Gary B Schuster; Ramanarayanan Krishnamurthy; Nicholas V Hud
Journal:  Org Biomol Chem       Date:  2018-02-21       Impact factor: 3.876

3.  A prebiotically plausible synthesis of pyrimidine β-ribonucleosides and their phosphate derivatives involving photoanomerization.

Authors:  Jianfeng Xu; Maria Tsanakopoulou; Christopher J Magnani; Rafał Szabla; Judit E Šponer; Jiří Šponer; Robert W Góra; John D Sutherland
Journal:  Nat Chem       Date:  2016-11-21       Impact factor: 24.427

4.  The case for an ancestral genetic system involving simple analogues of the nucleotides.

Authors:  G F Joyce; A W Schwartz; S L Miller; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

5.  Prebiotic synthesis of phosphoenol pyruvate by α-phosphorylation-controlled triose glycolysis.

Authors:  Adam J Coggins; Matthew W Powner
Journal:  Nat Chem       Date:  2016-10-10       Impact factor: 24.427

6.  Template switching between PNA and RNA oligonucleotides.

Authors:  C Böhler; P E Nielsen; L E Orgel
Journal:  Nature       Date:  1995-08-17       Impact factor: 49.962

7.  Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions.

Authors:  Matthew W Powner; Béatrice Gerland; John D Sutherland
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

Review 8.  Prebiotic chemistry and the origin of the RNA world.

Authors:  Leslie E Orgel
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Mar-Apr       Impact factor: 8.250

9.  Synthetic genetic polymers capable of heredity and evolution.

Authors:  Vitor B Pinheiro; Alexander I Taylor; Christopher Cozens; Mikhail Abramov; Marleen Renders; Su Zhang; John C Chaput; Jesper Wengel; Sew-Yeu Peak-Chew; Stephen H McLaughlin; Piet Herdewijn; Philipp Holliger
Journal:  Science       Date:  2012-04-20       Impact factor: 47.728

10.  Divergent prebiotic synthesis of pyrimidine and 8-oxo-purine ribonucleotides.

Authors:  Shaun Stairs; Arif Nikmal; Dejan-Krešimir Bučar; Shao-Liang Zheng; Jack W Szostak; Matthew W Powner
Journal:  Nat Commun       Date:  2017-05-19       Impact factor: 14.919

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  12 in total

1.  Selective prebiotic formation of RNA pyrimidine and DNA purine nucleosides.

Authors:  Jianfeng Xu; Václav Chmela; Nicholas J Green; David A Russell; Mikołaj J Janicki; Robert W Góra; Rafał Szabla; Andrew D Bond; John D Sutherland
Journal:  Nature       Date:  2020-06-03       Impact factor: 49.962

2.  Photochemistry of 2-thiooxazole: a plausible prebiotic precursor to RNA nucleotides.

Authors:  Lauren Bertram; Samuel J Roberts; Matthew W Powner; Rafał Szabla
Journal:  Phys Chem Chem Phys       Date:  2022-09-14       Impact factor: 3.945

3.  2,6-diaminopurine promotes repair of DNA lesions under prebiotic conditions.

Authors:  Rafał Szabla; Magdalena Zdrowowicz; Paulina Spisz; Nicholas J Green; Petr Stadlbauer; Holger Kruse; Jiří Šponer; Janusz Rak
Journal:  Nat Commun       Date:  2021-05-21       Impact factor: 17.694

4.  Random-sequence genetic oligomer pools display an innate potential for ligation and recombination.

Authors:  Hannes Mutschler; Alexander I Taylor; Benjamin T Porebski; Alice Lightowlers; Gillian Houlihan; Mikhail Abramov; Piet Herdewijn; Philipp Holliger
Journal:  Elife       Date:  2018-11-21       Impact factor: 8.713

5.  Effect of UV Radiation on Fluorescent RNA Aptamers' Functional and Templating Ability.

Authors:  Ranajay Saha; Irene A Chen
Journal:  Chembiochem       Date:  2019-08-21       Impact factor: 3.164

Review 6.  How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water.

Authors:  Peter Tremmel; Helmut Griesser; Ulrich E Steiner; Clemens Richert
Journal:  Angew Chem Int Ed Engl       Date:  2019-08-09       Impact factor: 15.336

Review 7.  Illuminating Life's Origins: UV Photochemistry in Abiotic Synthesis of Biomolecules.

Authors:  Nicholas J Green; Jianfeng Xu; John D Sutherland
Journal:  J Am Chem Soc       Date:  2021-04-21       Impact factor: 15.419

8.  A Model for the Emergence of RNA from a Prebiotically Plausible Mixture of Ribonucleotides, Arabinonucleotides, and 2'-Deoxynucleotides.

Authors:  Seohyun Chris Kim; Lijun Zhou; Wen Zhang; Derek K O'Flaherty; Valeria Rondo-Brovetto; Jack W Szostak
Journal:  J Am Chem Soc       Date:  2020-01-22       Impact factor: 16.383

Review 9.  Coenzymes and Their Role in the Evolution of Life.

Authors:  Andreas Kirschning
Journal:  Angew Chem Int Ed Engl       Date:  2020-10-23       Impact factor: 15.336

10.  Computational Analysis of a Prebiotic Amino Acid Synthesis with Reference to Extant Codon-Amino Acid Relationships.

Authors:  Tolga Yaman; Jeremy N Harvey
Journal:  Life (Basel)       Date:  2021-12-04
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