Literature DB >> 24058159

Histone deacetylase complex1 expression level titrates plant growth and abscisic acid sensitivity in Arabidopsis.

Giorgio Perrella1, Manuel A Lopez-Vernaza, Craig Carr, Emanuela Sani, Veronique Gosselé, Christoph Verduyn, Fabian Kellermeier, Matthew A Hannah, Anna Amtmann.   

Abstract

Histone deacetylation regulates gene expression during plant stress responses and is therefore an interesting target for epigenetic manipulation of stress sensitivity in plants. Unfortunately, overexpression of the core enzymes (histone deacetylases [HDACs]) has either been ineffective or has caused pleiotropic morphological abnormalities. In yeast and mammals, HDACs operate within multiprotein complexes. Searching for putative components of plant HDAC complexes, we identified a gene with partial homology to a functionally uncharacterized member of the yeast complex, which we called Histone Deacetylation Complex1 (HDC1). HDC1 is encoded by a single-copy gene in the genomes of model plants and crops and therefore presents an attractive target for biotechnology. Here, we present a functional characterization of HDC1 in Arabidopsis thaliana. We show that HDC1 is a ubiquitously expressed nuclear protein that interacts with at least two deacetylases (HDA6 and HDA19), promotes histone deacetylation, and attenuates derepression of genes under water stress. The fast-growing HDC1-overexpressing plants outperformed wild-type plants not only on well-watered soil but also when water supply was reduced. Our findings identify HDC1 as a rate-limiting component of the histone deacetylation machinery and as an attractive tool for increasing germination rate and biomass production of plants.

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Year:  2013        PMID: 24058159      PMCID: PMC3809545          DOI: 10.1105/tpc.113.114835

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  56 in total

1.  The abscisic acid-related SNARE homolog NtSyr1 contributes to secretion and growth: evidence from competition with its cytosolic domain.

Authors:  Danny Geelen; Barbara Leyman; Henri Batoko; Gian-Pietro Di Sansebastiano; Ian Moore; Michael R Blatt; Gian-Pietro Di Sansabastiano
Journal:  Plant Cell       Date:  2002-02       Impact factor: 11.277

2.  Structure and expression of the rice class-I type histone deacetylase genes OsHDAC1-3: OsHDAC1 overexpression in transgenic plants leads to increased growth rate and altered architecture.

Authors:  In-Cheol Jang; Yoon-Mok Pahk; Sang Ik Song; Ho Jeong Kwon; Baek Hie Nahm; Ju-Kon Kim
Journal:  Plant J       Date:  2003-02       Impact factor: 6.417

3.  GATEWAY vectors for Agrobacterium-mediated plant transformation.

Authors:  Mansour Karimi; Dirk Inzé; Ann Depicker
Journal:  Trends Plant Sci       Date:  2002-05       Impact factor: 18.313

4.  An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus.

Authors:  Olivier Voinnet; Susana Rivas; Pere Mestre; David Baulcombe
Journal:  Plant J       Date:  2003-03       Impact factor: 6.417

5.  Involvement of Arabidopsis HOS15 in histone deacetylation and cold tolerance.

Authors:  Jianhua Zhu; Jae Cheol Jeong; Yanmei Zhu; Irina Sokolchik; Saori Miyazaki; Jian-Kang Zhu; Paul M Hasegawa; Hans J Bohnert; Huazhong Shi; Dae-Jin Yun; Ray A Bressan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-20       Impact factor: 11.205

6.  The Arabidopsis histone deacetylases HDA6 and HDA19 contribute to the repression of embryonic properties after germination.

Authors:  Motoki Tanaka; Akira Kikuchi; Hiroshi Kamada
Journal:  Plant Physiol       Date:  2007-11-16       Impact factor: 8.340

7.  Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.

Authors:  Anne-Valérie Gendrel; Zachary Lippman; Cristy Yordan; Vincent Colot; Robert A Martienssen
Journal:  Science       Date:  2002-06-20       Impact factor: 47.728

Review 8.  Molecular aspects of seed dormancy.

Authors:  Ruth Finkelstein; Wendy Reeves; Tohru Ariizumi; Camille Steber
Journal:  Annu Rev Plant Biol       Date:  2008       Impact factor: 26.379

9.  Blocking histone deacetylation in Arabidopsis induces pleiotropic effects on plant gene regulation and development.

Authors:  L Tian; Z J Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

10.  Arabidopsis HDA6 regulates locus-directed heterochromatin silencing in cooperation with MET1.

Authors:  Taiko Kim To; Jong-Myong Kim; Akihiro Matsui; Yukio Kurihara; Taeko Morosawa; Junko Ishida; Maho Tanaka; Takaho Endo; Tetsuji Kakutani; Tetsuro Toyoda; Hiroshi Kimura; Shigeyuki Yokoyama; Kazuo Shinozaki; Motoaki Seki
Journal:  PLoS Genet       Date:  2011-04-28       Impact factor: 5.917

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  35 in total

1.  HISTONE DEACETYLASE6 Acts in Concert with Histone Methyltransferases SUVH4, SUVH5, and SUVH6 to Regulate Transposon Silencing.

Authors:  Chun-Wei Yu; Ready Tai; Shen-Chi Wang; Ping Yang; Ming Luo; Songguang Yang; Kai Cheng; Wen-Chun Wang; Yi-Sheng Cheng; Keqiang Wu
Journal:  Plant Cell       Date:  2017-08-04       Impact factor: 11.277

2.  HISTONE DEACETYLASE 9 stimulates auxin-dependent thermomorphogenesis in Arabidopsis thaliana by mediating H2A.Z depletion.

Authors:  Lennard C van der Woude; Giorgio Perrella; Basten L Snoek; Mark van Hoogdalem; Ondřej Novák; Marcel C van Verk; Heleen N van Kooten; Lennert E Zorn; Rolf Tonckens; Joram A Dongus; Myrthe Praat; Evelien A Stouten; Marcel C G Proveniers; Elisa Vellutini; Eirini Patitaki; Umidjon Shapulatov; Wouter Kohlen; Sureshkumar Balasubramanian; Karin Ljung; Alexander R van der Krol; Sjef Smeekens; Eirini Kaiserli; Martijn van Zanten
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-25       Impact factor: 11.205

3.  MRF Family Genes Are Involved in Translation Control, Especially under Energy-Deficient Conditions, and Their Expression and Functions Are Modulated by the TOR Signaling Pathway.

Authors:  Du-Hwa Lee; Seung Jun Park; Chang Sook Ahn; Hyun-Sook Pai
Journal:  Plant Cell       Date:  2017-10-30       Impact factor: 11.277

4.  Genome-Wide Mapping of Targets of Maize Histone Deacetylase HDA101 Reveals Its Function and Regulatory Mechanism during Seed Development.

Authors:  Hua Yang; Xinye Liu; Mingming Xin; Jinkun Du; Zhaorong Hu; HuiRu Peng; Vincenzo Rossi; Qixin Sun; Zhongfu Ni; Yingyin Yao
Journal:  Plant Cell       Date:  2016-02-23       Impact factor: 11.277

5.  Selection for Improved Energy Use Efficiency and Drought Tolerance in Canola Results in Distinct Transcriptome and Epigenome Changes.

Authors:  Aurine Verkest; Marina Byzova; Cindy Martens; Patrick Willems; Tom Verwulgen; Bram Slabbinck; Debbie Rombaut; Jan Van de Velde; Klaas Vandepoele; Evi Standaert; Marrit Peeters; Mieke Van Lijsebettens; Frank Van Breusegem; Marc De Block
Journal:  Plant Physiol       Date:  2015-06-16       Impact factor: 8.340

Review 6.  Stress-induced chromatin changes in plants: of memories, metabolites and crop improvement.

Authors:  Cécile Vriet; Lars Hennig; Christophe Laloi
Journal:  Cell Mol Life Sci       Date:  2015-01-13       Impact factor: 9.261

Review 7.  Structural disorder in plant proteins: where plasticity meets sessility.

Authors:  Alejandra A Covarrubias; Cesar L Cuevas-Velazquez; Paulette S Romero-Pérez; David F Rendón-Luna; Caspar C C Chater
Journal:  Cell Mol Life Sci       Date:  2017-06-22       Impact factor: 9.261

8.  The Histone Deacetylase Complex 1 Protein of Arabidopsis Has the Capacity to Interact with Multiple Proteins Including Histone 3-Binding Proteins and Histone 1 Variants.

Authors:  Giorgio Perrella; Craig Carr; Maria A Asensi-Fabado; Naomi A Donald; Katalin Páldi; Matthew A Hannah; Anna Amtmann
Journal:  Plant Physiol       Date:  2016-03-07       Impact factor: 8.340

9.  HISTONE DEACETYLASE6 Controls Gene Expression Patterning and DNA Methylation-Independent Euchromatic Silencing.

Authors:  Emilija Hristova; Kateryna Fal; Laurin Klemme; David Windels; Etienne Bucher
Journal:  Plant Physiol       Date:  2015-04-27       Impact factor: 8.340

10.  Genome-wide Target Mapping Shows Histone Deacetylase Complex1 Regulates Cell Proliferation in Cucumber Fruit.

Authors:  Zhen Zhang; Bowen Wang; Shenhao Wang; Tao Lin; Li Yang; Zunlian Zhao; Zhonghua Zhang; Sanwen Huang; Xueyong Yang
Journal:  Plant Physiol       Date:  2019-08-04       Impact factor: 8.340

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