Literature DB >> 25578097

Stress-induced chromatin changes in plants: of memories, metabolites and crop improvement.

Cécile Vriet1, Lars Hennig, Christophe Laloi.   

Abstract

Exposure of plants to adverse environmental conditions leads to extensive transcriptional changes. Genome-wide approaches and gene function studies have revealed the importance of chromatin-level control in the regulation of stress-responsive gene expression. Advances in understanding chromatin modifications implicated in plant stress response and identifying proteins involved in chromatin-mediated transcriptional responses to stress are briefly presented in this review. We then highlight how chromatin-mediated gene expression changes can be coupled to the metabolic status of the cell, since many of the chromatin-modifying proteins involved in transcriptional regulation depend on cofactors and metabolites that are shared with enzymes in basic metabolism. Lastly, we discuss the stability and heritability of stress-induced chromatin changes and the potential of chromatin-based strategies for increasing stress tolerance of crops.

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Year:  2015        PMID: 25578097     DOI: 10.1007/s00018-014-1792-z

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  119 in total

Review 1.  Chromatin modifications and their function.

Authors:  Tony Kouzarides
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 2.  HMGB proteins: interactions with DNA and chromatin.

Authors:  Michal Stros
Journal:  Biochim Biophys Acta       Date:  2010 Jan-Feb

3.  Plant histone acetylation: in the beginning ...

Authors:  Jakob H Waterborg
Journal:  Biochim Biophys Acta       Date:  2011-08

4.  Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression.

Authors:  Junli Zhou; Xiangfeng Wang; Kun He; Jean-Benoit F Charron; Axel A Elling; Xing Wang Deng
Journal:  Plant Mol Biol       Date:  2010-04       Impact factor: 4.076

5.  Two Arabidopsis orthologs of the transcriptional coactivator ADA2 have distinct biological functions.

Authors:  Amy T Hark; Konstantinos E Vlachonasios; Kanchan A Pavangadkar; Sumana Rao; Hillary Gordon; Ioannis-Dimosthenis Adamakis; Athanasios Kaldis; Michael F Thomashow; Steven J Triezenberg
Journal:  Biochim Biophys Acta       Date:  2008-09-26

6.  Gene silencing and homology-dependent gene silencing in Arabidopsis: genetic modifiers and DNA methylation.

Authors:  I J Furner; M A Sheikh; C E Collett
Journal:  Genetics       Date:  1998-06       Impact factor: 4.562

7.  Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice.

Authors:  Limin Huang; Qianwen Sun; Fujun Qin; Chen Li; Yu Zhao; Dao-Xiu Zhou
Journal:  Plant Physiol       Date:  2007-04-27       Impact factor: 8.340

Review 8.  Stress-induced chromatin changes: a critical view on their heritability.

Authors:  Ales Pecinka; Ortrun Mittelsten Scheid
Journal:  Plant Cell Physiol       Date:  2012-03-28       Impact factor: 4.927

9.  Dual function of MIPS1 as a metabolic enzyme and transcriptional regulator.

Authors:  David Latrasse; Teddy Jégu; Pin-Hong Meng; Christelle Mazubert; Elodie Hudik; Marianne Delarue; Céline Charon; Martin Crespi; Heribert Hirt; Cécile Raynaud; Catherine Bergounioux; Moussa Benhamed
Journal:  Nucleic Acids Res       Date:  2013-01-21       Impact factor: 16.971

10.  Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.

Authors:  Yong Ding; Ning Liu; Laetitia Virlouvet; Jean-Jack Riethoven; Michael Fromm; Zoya Avramova
Journal:  BMC Plant Biol       Date:  2013-12-30       Impact factor: 4.215

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  25 in total

1.  A hit-and-run heat shock factor governs sustained histone methylation and transcriptional stress memory.

Authors:  Jörn Lämke; Krzysztof Brzezinka; Simone Altmann; Isabel Bäurle
Journal:  EMBO J       Date:  2015-12-09       Impact factor: 11.598

2.  Arabidopsis thaliana siRNA biogenesis mutants have the lower frequency of homologous recombination.

Authors:  Youli Yao; Andriy Bilichak; Andrey Golubov; Igor Kovalchuk
Journal:  Plant Signal Behav       Date:  2016-07-02

Review 3.  Creating Order from Chaos: Epigenome Dynamics in Plants with Complex Genomes.

Authors:  Nathan M Springer; Damon Lisch; Qing Li
Journal:  Plant Cell       Date:  2016-02-11       Impact factor: 11.277

4.  HPLC-ESI-QTOF-MS/MS profiling and therapeutic effects of Schinus terebinthifolius and Schinus molle fruits: investigation of their antioxidant, antidiabetic, anti-inflammatory and antinociceptive properties.

Authors:  Anouar Feriani; Meriam Tir; Afoua Mufti; Ana María Gómez Caravaca; María Del Mar Contreras; Amani Taamalli; Antonio Segura Carretero; Nouf Aldawood; Saber Nahdi; Saleh Alwasel; Abdel Halim Harrath; Nizar Tlili
Journal:  Inflammopharmacology       Date:  2021-02-26       Impact factor: 4.473

Review 5.  Transcriptional memory and response to adverse temperatures in plants.

Authors:  Wei Xie; Qianqian Tang; Fei Yan; Zeng Tao
Journal:  J Zhejiang Univ Sci B       Date:  2021-10-15       Impact factor: 3.066

Review 6.  Molecular and genetic bases of heat stress responses in crop plants and breeding for increased resilience and productivity.

Authors:  Michela Janni; Mariolina Gullì; Elena Maestri; Marta Marmiroli; Babu Valliyodan; Henry T Nguyen; Nelson Marmiroli
Journal:  J Exp Bot       Date:  2020-06-26       Impact factor: 6.992

Review 7.  Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics.

Authors:  Peter A Crisp; Diep Ganguly; Steven R Eichten; Justin O Borevitz; Barry J Pogson
Journal:  Sci Adv       Date:  2016-02-19       Impact factor: 14.136

Review 8.  Deciphering the Epigenetic Alphabet Involved in Transgenerational Stress Memory in Crops.

Authors:  Velimir Mladenov; Vasileios Fotopoulos; Eirini Kaiserli; Erna Karalija; Stephane Maury; Miroslav Baranek; Naama Segal; Pilar S Testillano; Valya Vassileva; Glória Pinto; Manuela Nagel; Hans Hoenicka; Dragana Miladinović; Philippe Gallusci; Chiara Vergata; Aliki Kapazoglou; Eleni Abraham; Eleni Tani; Maria Gerakari; Efi Sarri; Evaggelia Avramidou; Mateo Gašparović; Federico Martinelli
Journal:  Int J Mol Sci       Date:  2021-07-01       Impact factor: 5.923

9.  Analysis of the transgenerational iron deficiency stress memory in Arabidopsis thaliana plants.

Authors:  Irene Murgia; Sonia Giacometti; Alma Balestrazzi; Stefania Paparella; Cristina Pagliano; Piero Morandini
Journal:  Front Plant Sci       Date:  2015-09-17       Impact factor: 5.753

Review 10.  Plant Heat Adaptation: priming in response to heat stress.

Authors:  Isabel Bäurle
Journal:  F1000Res       Date:  2016-04-18
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