Literature DB >> 24038259

Lipidomics technologies at the end of the first decade and the beginning of the next.

Alfred H Merrill1, Edward A Dennis, Jeffrey G McDonald, Eoin Fahy.   

Abstract

The lipidome is composed of all of the biomolecules defined as lipids, which encompass compounds of amazing structural diversity and complexity. It has been ∼1 decade since the study of "lipidomics" was begun in earnest, and the technologies and tools for data analysis have advanced considerably over this period. This workshop summarized the scope of the lipidome and technologies for its analysis, lipidomics databases and other online tools, and examples of the application of lipidomics to nutritional research. The slides from the workshop, online lipidomics tools, and databases are available at http://www.lipidmaps.org.

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Year:  2013        PMID: 24038259      PMCID: PMC3771151          DOI: 10.3945/an.113.004333

Source DB:  PubMed          Journal:  Adv Nutr        ISSN: 2161-8313            Impact factor:   8.701


  28 in total

1.  A mouse macrophage lipidome.

Authors:  Edward A Dennis; Raymond A Deems; Richard Harkewicz; Oswald Quehenberger; H Alex Brown; Stephen B Milne; David S Myers; Christopher K Glass; Gary Hardiman; Donna Reichart; Alfred H Merrill; M Cameron Sullards; Elaine Wang; Robert C Murphy; Christian R H Raetz; Teresa A Garrett; Ziqiang Guan; Andrea C Ryan; David W Russell; Jeffrey G McDonald; Bonne M Thompson; Walter A Shaw; Manish Sud; Yihua Zhao; Shakti Gupta; Mano R Maurya; Eoin Fahy; Shankar Subramaniam
Journal:  J Biol Chem       Date:  2010-10-05       Impact factor: 5.157

Review 2.  Multi-dimensional mass spectrometry-based shotgun lipidomics and novel strategies for lipidomic analyses.

Authors:  Xianlin Han; Kui Yang; Richard W Gross
Journal:  Mass Spectrom Rev       Date:  2011-07-13       Impact factor: 10.946

3.  Lipidomics reveals a remarkable diversity of lipids in human plasma.

Authors:  Oswald Quehenberger; Aaron M Armando; Alex H Brown; Stephen B Milne; David S Myers; Alfred H Merrill; Sibali Bandyopadhyay; Kristin N Jones; Samuel Kelly; Rebecca L Shaner; Cameron M Sullards; Elaine Wang; Robert C Murphy; Robert M Barkley; Thomas J Leiker; Christian R H Raetz; Ziqiang Guan; Gregory M Laird; David A Six; David W Russell; Jeffrey G McDonald; Shankar Subramaniam; Eoin Fahy; Edward A Dennis
Journal:  J Lipid Res       Date:  2010-07-29       Impact factor: 5.922

Review 4.  Lipid classification, structures and tools.

Authors:  Eoin Fahy; Dawn Cotter; Manish Sud; Shankar Subramaniam
Journal:  Biochim Biophys Acta       Date:  2011-06-16

Review 5.  Applications of mass spectrometry to lipids and membranes.

Authors:  Richard Harkewicz; Edward A Dennis
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

Review 6.  The modification of plant oil composition via metabolic engineering--better nutrition by design.

Authors:  Richard P Haslam; Noemi Ruiz-Lopez; Peter Eastmond; Maurice Moloney; Olga Sayanova; Johnathan A Napier
Journal:  Plant Biotechnol J       Date:  2012-10-16       Impact factor: 9.803

7.  FiehnLib: mass spectral and retention index libraries for metabolomics based on quadrupole and time-of-flight gas chromatography/mass spectrometry.

Authors:  Tobias Kind; Gert Wohlgemuth; Do Yup Lee; Yun Lu; Mine Palazoglu; Sevini Shahbaz; Oliver Fiehn
Journal:  Anal Chem       Date:  2009-12-15       Impact factor: 6.986

8.  Kdo2-Lipid A of Escherichia coli, a defined endotoxin that activates macrophages via TLR-4.

Authors:  Christian R H Raetz; Teresa A Garrett; C Michael Reynolds; Walter A Shaw; Jeff D Moore; Dale C Smith; Anthony A Ribeiro; Robert C Murphy; Richard J Ulevitch; Colleen Fearns; Donna Reichart; Christopher K Glass; Chris Benner; Shankar Subramaniam; Richard Harkewicz; Rebecca C Bowers-Gentry; Matthew W Buczynski; Jennifer A Cooper; Raymond A Deems; Edward A Dennis
Journal:  J Lipid Res       Date:  2006-02-14       Impact factor: 5.922

9.  Omega-3 fatty acids cause dramatic changes in TLR4 and purinergic eicosanoid signaling.

Authors:  Paul C Norris; Edward A Dennis
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-14       Impact factor: 11.205

10.  Applications of metabolomics for understanding the action of peroxisome proliferator-activated receptors (PPARs) in diabetes, obesity and cancer.

Authors:  Zsuzsanna Ament; Mojgan Masoodi; Julian L Griffin
Journal:  Genome Med       Date:  2012-04-30       Impact factor: 11.117

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  6 in total

Review 1.  Recent advances in lipid separations and structural elucidation using mass spectrometry combined with ion mobility spectrometry, ion-molecule reactions and fragmentation approaches.

Authors:  Xueyun Zheng; Richard D Smith; Erin S Baker
Journal:  Curr Opin Chem Biol       Date:  2017-12-07       Impact factor: 8.822

2.  Plasma lipidomic profiles after a low and high glycemic load dietary pattern in a randomized controlled crossover feeding study.

Authors:  Sepideh Dibay Moghadam; Sandi L Navarro; Ali Shojaie; Timothy W Randolph; Lisa F Bettcher; Cynthia B Le; Meredith A Hullar; Mario Kratz; Marian L Neuhouser; Paul D Lampe; Daniel Raftery; Johanna W Lampe
Journal:  Metabolomics       Date:  2020-11-20       Impact factor: 4.290

Review 3.  Ceramides and other sphingolipids as drivers of cardiovascular disease.

Authors:  Ran Hee Choi; Sean M Tatum; J David Symons; Scott A Summers; William L Holland
Journal:  Nat Rev Cardiol       Date:  2021-03-26       Impact factor: 49.421

4.  Application of stable isotope-assisted metabolomics for cell metabolism studies.

Authors:  Le You; Baichen Zhang; Yinjie J Tang
Journal:  Metabolites       Date:  2014-03-31

Review 5.  Creating the Future of Evidence-Based Nutrition Recommendations: Case Studies from Lipid Research.

Authors:  Johanna T Dwyer; Kristin H Rubin; Kevin L Fritsche; Tricia L Psota; DeAnn J Liska; William S Harris; Scott J Montain; Barbara J Lyle
Journal:  Adv Nutr       Date:  2016-07-15       Impact factor: 8.701

6.  Lipidomics Suggests a New Role for Ceramide Synthase in Phagocytosis.

Authors:  Divya Pathak; Neelay Mehendale; Shubham Singh; Roop Mallik; Siddhesh S Kamat
Journal:  ACS Chem Biol       Date:  2018-07-13       Impact factor: 5.100

  6 in total

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