Literature DB >> 21469951

Applications of mass spectrometry to lipids and membranes.

Richard Harkewicz1, Edward A Dennis.   

Abstract

Lipidomics, a major part of metabolomics, constitutes the detailed analysis and global characterization, both spatial and temporal, of the structure and function of lipids (the lipidome) within a living system. As with proteomics, mass spectrometry has earned a central analytical role in lipidomics, and this role will continue to grow with technological developments. Currently, there exist two mass spectrometry-based lipidomics approaches, one based on a division of lipids into categories and classes prior to analysis, the "comprehensive lipidomics analysis by separation simplification" (CLASS), and the other in which all lipid species are analyzed together without prior separation, shotgun. In exploring the lipidome of various living systems, novel lipids are being discovered, and mass spectrometry is helping characterize their chemical structure. Deuterium exchange mass spectrometry (DXMS) is being used to investigate the association of lipids and membranes with proteins and enzymes, and imaging mass spectrometry (IMS) is being applied to the in situ analysis of lipids in tissues.

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Year:  2011        PMID: 21469951      PMCID: PMC3410560          DOI: 10.1146/annurev-biochem-060409-092612

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  77 in total

Review 1.  Shotgun lipidomics: electrospray ionization mass spectrometric analysis and quantitation of cellular lipidomes directly from crude extracts of biological samples.

Authors:  Xianlin Han; Richard W Gross
Journal:  Mass Spectrom Rev       Date:  2005 May-Jun       Impact factor: 10.946

2.  Automated identification and quantification of glycerophospholipid molecular species by multiple precursor ion scanning.

Authors:  Christer S Ejsing; Eva Duchoslav; Julio Sampaio; Kai Simons; Ron Bonner; Christoph Thiele; Kim Ekroos; Andrej Shevchenko
Journal:  Anal Chem       Date:  2006-09-01       Impact factor: 6.986

3.  Profiling and imaging of tissues by imaging ion mobility-mass spectrometry.

Authors:  John A McLean; Whitney B Ridenour; Richard M Caprioli
Journal:  J Mass Spectrom       Date:  2007-08       Impact factor: 1.982

4.  Sublimation as a method of matrix application for mass spectrometric imaging.

Authors:  Joseph A Hankin; Robert M Barkley; Robert C Murphy
Journal:  J Am Soc Mass Spectrom       Date:  2007-06-30       Impact factor: 3.109

5.  Subcellular organelle lipidomics in TLR-4-activated macrophages.

Authors:  Alexander Y Andreyev; Eoin Fahy; Ziqiang Guan; Samuel Kelly; Xiang Li; Jeffrey G McDonald; Stephen Milne; David Myers; Hyejung Park; Andrea Ryan; Bonne M Thompson; Elaine Wang; Yihua Zhao; H Alex Brown; Alfred H Merrill; Christian R H Raetz; David W Russell; Shankar Subramaniam; Edward A Dennis
Journal:  J Lipid Res       Date:  2010-06-23       Impact factor: 5.922

6.  Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry.

Authors:  Christer S Ejsing; Julio L Sampaio; Vineeth Surendranath; Eva Duchoslav; Kim Ekroos; Robin W Klemm; Kai Simons; Andrej Shevchenko
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-27       Impact factor: 11.205

7.  H/D exchange and mass spectrometry in the studies of protein conformation and dynamics: is there a need for a top-down approach?

Authors:  Igor A Kaltashov; Cedric E Bobst; Rinat R Abzalimov
Journal:  Anal Chem       Date:  2009-10-01       Impact factor: 6.986

8.  Protein structure change studied by hydrogen-deuterium exchange, functional labeling, and mass spectrometry.

Authors:  Joan J Englander; Charyl Del Mar; Will Li; S Walter Englander; Jack S Kim; David D Stranz; Yoshitomo Hamuro; Virgil L Woods
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-28       Impact factor: 11.205

9.  Identification of phosphatidylserylglutamate: a novel minor lipid in Escherichia coli.

Authors:  Teresa A Garrett; Christian R H Raetz; Travis Richardson; Reza Kordestani; Jennifer D Son; Rebecca L Rose
Journal:  J Lipid Res       Date:  2008-12-18       Impact factor: 5.922

10.  C60 secondary ion mass spectrometry with a hybrid-quadrupole orthogonal time-of-flight mass spectrometer.

Authors:  Anthony Carado; M K Passarelli; Joseph Kozole; J E Wingate; Nicholas Winograd; A V Loboda
Journal:  Anal Chem       Date:  2008-10-10       Impact factor: 6.986

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  58 in total

Review 1.  The human plasma lipidome.

Authors:  Oswald Quehenberger; Edward A Dennis
Journal:  N Engl J Med       Date:  2011-11-10       Impact factor: 91.245

2.  Lipidomics technologies at the end of the first decade and the beginning of the next.

Authors:  Alfred H Merrill; Edward A Dennis; Jeffrey G McDonald; Eoin Fahy
Journal:  Adv Nutr       Date:  2013-09-01       Impact factor: 8.701

3.  High-throughput lipidomic analysis of fatty acid derived eicosanoids and N-acylethanolamines.

Authors:  Darren S Dumlao; Matthew W Buczynski; Paul C Norris; Richard Harkewicz; Edward A Dennis
Journal:  Biochim Biophys Acta       Date:  2011-06-13

4.  Comprehensive lipidome analysis by shotgun lipidomics on a hybrid quadrupole-orbitrap-linear ion trap mass spectrometer.

Authors:  Reinaldo Almeida; Josch Konstantin Pauling; Elena Sokol; Hans Kristian Hannibal-Bach; Christer S Ejsing
Journal:  J Am Soc Mass Spectrom       Date:  2014-11-13       Impact factor: 3.109

5.  Membranes serve as allosteric activators of phospholipase A2, enabling it to extract, bind, and hydrolyze phospholipid substrates.

Authors:  Varnavas D Mouchlis; Denis Bucher; J Andrew McCammon; Edward A Dennis
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-26       Impact factor: 11.205

6.  Improved mass spectrometric detection of acidic peptides by variations in the functional group pKa values of reverse micelle extraction agents.

Authors:  Bo Zhao; Mahalia A C Serrano; Meizhe Wang; Tianying Liu; Mallory R Gordon; S Thayumanavan; Richard W Vachet
Journal:  Analyst       Date:  2018-03-12       Impact factor: 4.616

Review 7.  Latest developments in experimental and computational approaches to characterize protein-lipid interactions.

Authors:  Hyunju Cho; Ming Wu; Betul Bilgin; S Patrick Walton; Christina Chan
Journal:  Proteomics       Date:  2012-11       Impact factor: 3.984

8.  Lipidomic analysis of lipid droplets from murine hepatocytes reveals distinct signatures for nutritional stress.

Authors:  Chandramohan Chitraju; Martin Trötzmüller; Jürgen Hartler; Heimo Wolinski; Gerhard G Thallinger; Achim Lass; Rudolf Zechner; Robert Zimmermann; Harald C Köfeler; Friedrich Spener
Journal:  J Lipid Res       Date:  2012-08-07       Impact factor: 5.922

9.  Modeling of eicosanoid fluxes reveals functional coupling between cyclooxygenases and terminal synthases.

Authors:  Yasuyuki Kihara; Shakti Gupta; Mano R Maurya; Aaron Armando; Ishita Shah; Oswald Quehenberger; Christopher K Glass; Edward A Dennis; Shankar Subramaniam
Journal:  Biophys J       Date:  2014-02-18       Impact factor: 4.033

Review 10.  Targeted lipidomic strategies for oxygenated metabolites of polyunsaturated fatty acids.

Authors:  Giuseppe Astarita; Alexandra C Kendall; Edward A Dennis; Anna Nicolaou
Journal:  Biochim Biophys Acta       Date:  2014-12-05
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