Literature DB >> 24031709

The diversity, extracellular enzymatic activities and photoprotective compounds of yeasts isolated in Antarctica.

Aline B M Vaz1, Luiz H Rosa, Mariana L A Vieira, Virginia de Garcia, Luciana R Brandão, Lia C R S Teixeira, Martin Moliné, Diego Libkind, Maria van Broock, Carlos A Rosa.   

Abstract

The diversity of yeasts collected from different sites in Antarctica (Admiralty Bay, King George Island and Port Foster Bay and Deception Island) and their ability to produce extracellular enzymes and mycosporines were studied. Samples were collected during the austral summer season, between November 2006 and January 2007, from the rhizosphere of Deschampsia antarctica, ornithogenic (penguin guano) soil, soil, marine and lake sediments, marine water and freshwater from lakes. A total of 89 isolates belonging to the following genera were recovered: Bensingtonia, Candida, Cryptococcus, Debaryomyces, Dioszegia, Exophiala, Filobasidium, Issatchenkia (Pichia), Kodamaea, Leucosporidium, Leucosporidiella, Metschnikowia, Nadsonia, Pichia, Rhodotorula, and Sporidiobolus, and the yeast-like fungi Aureobasidium, Leuconeurospora and Microglossum. Cryptococcus victoriae was the most frequently identified species. Several species isolated in our study have been previously reported to be Antarctic psychophilic yeasts, including Cr. antarcticus, Cr. victoriae, Dioszegia hungarica and Leucosporidium scottii. The cosmopolitan yeast species A. pullulans, C. zeylanoides, D. hansenii, I. orientalis, K. ohmeri, P. guilliermondii, Rh. mucilaginosa, and S. salmonicolor were also isolated. Five possible new species were identified. Sixty percent of the yeasts had at least one detectable extracellular enzymatic activity. Cryptococcus antarcticus, D. aurantiaca, D. crocea, D. hungarica, Dioszegia sp., E. xenobiotica, Rh. glaciales, Rh. laryngis, Microglossum sp. 1 and Microglossum sp. 2 produced mycosporines. Of the yeast isolates, 41.7% produced pigments and/or mycosporines and could be considered adapted to survive in Antarctica. Most of the yeasts had extracellular enzymatic activities at 4°C and 20°C, indicating that they could be metabolically active in the sampled substrates.

Entities:  

Keywords:  Antarctica; diversity; extracellular enzymes; mycosporines; yeasts

Year:  2011        PMID: 24031709      PMCID: PMC3768797          DOI: 10.1590/S1517-838220110003000012

Source DB:  PubMed          Journal:  Braz J Microbiol        ISSN: 1517-8382            Impact factor:   2.476


INTRODUCTION

The continent of Antarctica has a range of extreme climatic conditions and is considered to be one of the harshest ecosystems in the world. The low temperature, low water availability, low annual precipitation, frequent freeze–thaw cycles, strong winds, high sublimation and evaporation, and the high incidence of solar and especially ultraviolet radiation are significant limiting factors for plant and animal life in Antarctica (8). In addition, the geographic isolation and environmental stress make interesting the study of its endemic organisms (34). Recently, the occurrence and diversity of fungal species in this region has been investigated (2, 13, 32, 33, 34). According to Ruisi et al. (34), most of the fungi recorded in this area are anamorphic, have short life cycles, and limit metabolic costs associated with sexual reproduction. More than 1,000 fungal species have been reported from the maritime, continental, and sub-Antarctic regions (6, 29). Yeasts are able to grow at the low temperatures of Antarctica, suggesting that they are capable of degrading organic compounds at these temperatures and being an active part of the nutrient cycle (1, 36). Most yeast species of Antarctica are basidiomycetous anamorphs, but ascomycetous species may also be endemic to Antarctic habitats (23, 37, 40). The adaptation of these yeasts to cold habitats is also reflected in their structural and biochemical characteristics (37). The production of cold-adapted enzymes, cryoprotectants, and high amounts of polyunsaturated fatty acids in cytoplasmic membranes are examples of these adaptive strategies (40). In addition, the production of photoprotective compounds (carotenoids and mycosporines) by yeasts could be a strategy to survive in extreme environments. Mycosporines are water-soluble, UV-absorbing (310–320 nm) compounds with an aminocyclohexenone unit bound to an amino acid or amino alcohol group (21). The production of these compounds in yeasts from high-altitude lakes exposed to increased UV radiation has been correlated with the survival of some species in these environments (22). The photoprotective role of mycosporines, particularly mycosporine-glutaminol-glucoside, in yeasts as UV protectants and antioxidants has recently been reported (28). Carotenoids function primarily as antioxidants, and their UV-protective role has been also demonstrated in yeasts (26, 27). Here, we describe the isolation and identification of yeast species present in the rhizosphere of the grass Deschampsia antarctica Desv. (Poaceae), ornithogenic (penguin guano) soil, soil, water from lakes, seawater and sediments collected from different locations in Admiralty Bay at King George Island and Port Foster Bay at Deception island, Antarctica. In addition, we tested the ability of these yeasts to produce extracellular enzymes and mycosporines.

MATERIALS AND METHODS

Sampling sites and collections

The samples were collected at different sites in the Antarctic Specially Managed Area (ASMA) in Admiralty Bay, King George Island, South Shetland Islands (62°09’S, 58°28’W) and Port Foster Bay, Deception island (62°55.5'S, 60°37'W), Antarctica. Fourteen collection sites were selected along Admiralty Bay and Port Foster Bay (Table 1), and all were sampled during the austral summer season between November 2006 and January 2007. Samples were collected from the rhizosphere of Deschampsia antarctica Desv. (Poaceae) (21 samples), ornithogenic (penguin guano) soil (8 samples), soil (11 samples), marine (4 samples) and lake (3 samples) sediments, marine water (5 samples) and lake freshwater (16 samples). The samples were collected with sterile bags (roots, sediments, and soils) or sterile bottles (seawater and freshwater) and transported to the laboratory on ice within 24 h for processing. Marine sediment samples were collected using a Van Veen grab at depths not exceeding 60 m and stored at 4°C until use, not exceeding 24 h.
Table 1

Location of sampling sites and viable yeast counts isolated in different sources in Antarctica.

SubstrateSites and locationNumber of samplesLog CFU/g or log CFU/LaMean Log CFU/g or CFU/LStandard deviation (Log)
Rhizosphere of Deschampsia antarctica Desv. (Poaceae)Machu Picchu Station (62°07’S, 58°23’W); Plaza point (62°03’S, 58°24W); Brazilian Refuge II (62°04’S, 58°25’W) Demay point (62°12’S, 58°19’W); Hennequin point (62°05’S, 58°24’W); Botany point (62°05’S, 8°19’W); Ulmann point (62°05’S, 58°20’W); Henry Arctowisky Station (62°09’S, 58°27’W)212 - 3.2b2.40.4
Ornithogenic (penguin guano) soilDemay point (62°12’S, 58°19’W); Chabrier Rock (62°11’S, 58°18’W)82 - 32.10.3
SoilUlmann point (62°05’S, 58°20’W); Henry Arctowisky Station (62°09’S, 58°27’W); Botany point (62°05’S, 8°19’W); Comandante Ferraz Brazilian Station (62°05’S, 58°24’W)112 - 2.92.30.3
SedimentPort Foster, Deception Island (62°55’S, 60°37’W); Macchu Picchu station (62°07’S, 58°23’W); Copacabana United States Refuge (62°10’S, 58°26’W)72 - 3.22.40.4
SeawaterBotany point (62°05’S, 58°19’W); Ulmann point (62°05’S, 58°20’W)52 - 2.92.10.2
Freshwater from lakesMacchu Picchu Station (62°07’S, 58°23’W); Copacabana United States Refuge (62°10’S, 58°26’W)162 - 3.72.30.5

CFU(colony forming units)/g or /L;

Minimal and maximum counts.

Location of sampling sites and viable yeast counts isolated in different sources in Antarctica. CFU(colony forming units)/g or /L; Minimal and maximum counts.

Yeast isolation

Water from each site (10 mL) was filtered through 0.45-μm membranes with a 47-mm diameter (Millipore, USA). The membranes were placed on YM agar (0.3% yeast extract, 0.3% malt extract, 0.5% peptone, 2% glucose, 2% agar) containing 100 mg mL-1 chloramphenicol (Sigma, USA) and incubated at 15°C for 15 days. To obtain yeasts from soil, sediment, and the rhizosphere of D. antarctica, 1 g of each sample was added to 9 mL of Hanks buffer (Sigma, USA), and 100-μL serial dilutions (10–1 and 10–2) were inoculated onto YM agar plates and incubated as above. The different yeast morphotypes were counted, purified and maintained on YM agar slants or liquid nitrogen for later identification. All yeast isolates were deposited in the Collection of Microorganisms and Cells of the Universidade Federal of Minas Gerais.

Yeast identification

The yeasts were characterized by standard methods (41), and identifications followed the keys of Kurtzman and Fell (17). Isolates with identical morphological and physiological characteristics were grouped together and subjected to PCR fingerprinting using the microsatellite-primed PCR technique (MSP-PCR) with the core sequences of the phage M13 (5’-GAGGGTGGCGGTTCT-3’). DNA extraction was performed according to the protocols described by Loque et al. (23). PCR was performed in a 25-μL reaction containing 2.5 μL of 10X Mg-free PCR buffer, 1.5 μL of 25 mM MgCl2, 1 μL of 2 mM deoxyribonucleotide triphosphates (dNTPs), 1 μL of each 10 pmol-1 of M13 primer, 5 μL of DNA template, and 0.2 μL of 1 U/μL Taq DNA polymerase (Fermentans, USA). The PCR was performed according to Libkind et al. (20). Isolates with identical DNA banding patterns were grouped and considered to belong to the same species (14, 35). The internal transcribed spacer (ITS) and D1/D2 domains of the large subunit rRNA gene were sequenced in a representative strain of each MSP-PCR group. The D1/D2 domains were PCR-amplified with primers NL1 (5’-GCATATCAATAAGCGGAGGAAAAG-3’) and NL4 (5’-GGTCCGTGTTTCAAGACGG-3’) according to Lachance et al. (19). The ITS domains of the rRNA gene were amplified using the universal primers ITS1 (5’-TCCGTAGGTGAACC TGCGG-3’) and ITS4 (5’-TCCTCCGCTTATTGATATGC-3’) as described by White et al. (42). ITS-amplification and sequencing protocols were performed as described by Vaz et al. (39). The amplified DNA was concentrated and cleaned using Wizard Plus SV columns (Promega, USA), and sequenced in a MegaBACETM 1000 automated sequencing system (GE Healthcare, USA). The consensus sequence data were aligned with all sequences of related species in the GenBank database using Fasta 2.0 (3). The obtained nucleotide sequences and related sequences were aligned using ClustalW (http://www.ebi.ac.uk/clustalw/), and phylogenetic relationships were estimated using MEGA version 2.1 (16).

Extracellular enzymatic activity

All yeasts were tested for their ability to degrade starch, protein (casein), lipids (trybutirin and Tween-80), pectin and cellulose according to procedures described by Brizzio et al. (5). Calibrated suspensions of 106 cells mL–1 grown for 24–48 h were inoculated (10 μL) on the surface of agar plates (9). Plates containing each substrate were incubated at 4°C or 20°C. Enzymatic activity was analyzed after 5 days in samples incubated at 20°C and after 21 days in those incubated at 4°C. The halo/colony (h/c) ratio was used as a semi-quantitative assessment of extracellular enzymatic activity. Sporobolomyces ruberrimus CRUB1141 (amylase), Leucosporidiella fragaria CRUB1211 (protease), Rhodotorula mucilaginosa CRUB138 (lipase and pectinase) and Trichosporon mycotoxinivorans UFMG-HB20 were used as positive controls for enzymatic activities. Data for both temperatures were statistically compared using Student’s t-test (9).

Production of photoprotective compounds

Mycosporine detection, extraction, and induction were analyzed as described by Libkind et al. (21). Briefly, the isolates were incubated for 4 days at 18°C in an environmental test chamber (Sanyo MLR 350) with a 12:12 light:dark photoperiod. The chamber was illuminated with 10 white light fluorescent tubes (Sanyo, 40W) and 5 Q-Panel 340 fluorescent tubes, resulting in photosynthetically active radiation (PAR), UVA and UVB irradiances of 66, 15, and 0.7 Wm-2, respectively. For the screening analysis, isolated colonies were shielded with Ultraphan-395 film (UV Opak, Digefra, Munich, Germany, cutoff: 395 nm) and exposed to PAR only. After exposure, colonies were transferred to distilled water, centrifuged and stored at -20°C until mycosporine extraction. The pigment production was evaluated by the direct observation of yeast colonies grown on YMA at 5°C for 2 weeks.

RESULTS AND DISCUSSION

Yeast diversity and identification

The lowest yeast counts were from freshwater and seawater samples, ranging from 2 log CFU L-1 (meltwater of the Copacabana Refuge Lake) to 2.54 log CFU L-1 (meltwater of the Machu Picchu Station Lake) and 2 log CFU L-1 (seawater of Ullmann Point) to 2.24 log CFU L-1 (seawater of Botany Point). The highest counts were in soil and sediment samples (Table 1). In this work, counts in soil containing penguin guano ranged from 2 to 3 log CFU g-1; ornithogenic soils may provide rich sources of organic matter. di Menna et al. (10) reported variable counts ranging from 0.69 to over 5 log CFU g-1 from Antarctic soil samples. Yeasts can grow in many soil types from diverse geographical areas ranging from the arctic to the tropics (4, 18, 30). The role of soil yeasts in terrestrial ecosystems, in particular Antarctic soils, has not been adequately explored. A total of 89 yeast isolates were obtained and identified in following genera: Bensingtonia, Candida, Cryptococcus, Debaryomyces, Dioszegia, Exophiala, Filobasidium, Issatchenkia (Pichia), Kodamaea, Leucosporidium, Leucosporidiella, Metschnikowia, Nadsonia, Pichia, Rhodotorula, and Sporidiobolus, and the yeast-like fungi Aureobasidium, Leuconeurospora and Microglossum (Tables 2 and 3). Most were basidiomycetous anamorphs, and Cryptococcus species were the most frequently isolated yeasts in all samples. Cryptococcus species are frequently found in a variety of Antarctic sites and substrates, and many are psychrophilic (40). Cryptococcus species may be able to utilize available nutrients in oligotrophic systems, whereas most ascomycetous species cannot (7).
Table 2

Identification of yeasts isolated from different substrates in Antarctica.

UFMGCB codeClosest related species/GenBank accession numbersSimilarity (%)Identification
ANT 92Aureobasidium pullulans DBVPG 5028 / G0911487100A. pullulans
ANT 84, 85Bensingtonia yamatoana CBS7243 / AF18989699B. yamatoana
ANT 28, 22, 33, 37, 44, 108, 109Candida glaebosa CBS 5691 / CGU4575799C. glaebosa
ANT 60, 98Candida sake CBS 5740 / AY536216100C. sake
ANT 168Candida spencermartinsiae CBS 10894 / FJ008044100C. spencermartinsiae
ANT 130Candida zeylanoides CBS 619 / U4583299C. zeylanoides
ANT 21Cryptococcus antarcticus CBS7687 / A.F07548899Cr. antarcticus
ANT 29, 35, 53, 56, 77, 97, 100, 102, 103, 104, 106, 120, 128, MFA 17Cryptococcus victoriae CBS 8884 / AF44474199Cr. victoriae
ANT 20, 105, 111, 112Debaryomyces hansenii NRRL Y-17914 / DHU9492799D. hansenii
ANT 76Dioszegia aurantiaca PYCC 5856 / AY56214199D. aurantiaca
ANT 68Dioszegia crocea CBS 6714 / AF07550899D. crocea
ANT 73, EACF 103Dioszegia hungarica CBS 5124 / AF31423199D. hungarica
ANT 99Dioszegia sp. CRUB 1147 / EF59575398Dioszegia sp.
ANT 126, 141, 145, 149Exophialla xenobiotica CBS 115831 / FJ35824699E. xenobiotica
ANT 39Filobasidium capsuligenum CBS 4381 / AF44469594Filobasidium sp.
MF 50Issatchenkia (Pichia) orientalis CBS 573 / AY497684100I. orientalis
MFA 14Kodamaea ohmeri ATCC 46053 / AF335976100K. ohmeri
ANT 24, 62, 67, 80Leuconeurospora pulcherrima CBS 343.7 / AF09619397Leuconeurospora sp.
ANT 61, 81, 91, 139, 170Leucosporidiella creatinivora CBS8620 / AF18992599L. creatinivora
ANT 30, 69, 70, 71, 75, 78Leucosporidiella fragaria CBS 6254 / AF07042899L. fragaria
ANT 101, 118Leucosporidiella muscorum CBS 6921 / AF07043399L. muscorum
ANT 63, 133, 158, 160, 166, EACF 149Leucosporidium scottii CBS 5930 / AF07041999L. scottii
ANT 116, 169Metschnikowia australis NRRL Y-7014 / U76526100M. australis
ANT 96b, 142, 150, 152Microglossum rufum AFTOL 1292 / DO47098192Microglossum sp.1
ANT 146Microglossum rufum AFTOL 1292 / DO47098189Microglossum sp. 2
ANT 50, 54Nadsonia commutata CBS 6640 / U73598100N. commutata
MF 36Pichia guilliermondii CBS 2030 / U4570999P. guilliermondii
ANT 117, 121, 122, 123Rhodotorula glacialis DBVPG 4797 / EF64374099Rh. glacialis
ANT 11, 131, 136Rhodotorula laryngis CBS 2221 / AF18993799Rh. laryngis
ANT 153, MFC14Rhodotorula mucilaginosa Y-17501 / AF18995199Rh. mucilaginosa
ANT 86Sporodiobolus salmonicolor CBS 490 / AF07043999S. salmonicolor
Table 3

Yeast species isolated from different sources in Antarctica.

IdentificationOrigin of isolates
A(n=21)aB(n=l)C(n=7)D(n=l)E(n=3)F(n=6)G(n=l)H(n=l)I(n=4)J(n=2)K(n=2)L(n=3)M(n=ll)N(n=5)
Aureobasidium pullulans-------------1
Bensingtonia yamatoana--1-1---------
Candida glaebosa-13--2---1----
C. sake2-------------
C. spencermartinsiae-----------1--
C. zeylanoides----------1---
Cryptococcus antarcticus1-------------
Cr. victoriae712--1--1---11
Debaryomyces hansenii1----3--------
Dioszegia aurantiaca1-------------
D. crocea1-------------
D. hungarica2-------------
Dioszegia sp.1-------------
Exophiala xenobiotica-------------4
Filobasidium sp.---1----------
Issatchenkia (Pichia) orientalis------------1-
Kodamaea ohmeri------------3-
Leuconeurospora sp.2-1-1---------
Leucosporidiella creatinivora1---1------2-1
L. fragaria5-1-----------
L. muscorum1-------1-----
Leucosporidium scottii------1---23--
Metschnikowia australis--------1--1--
Microglossum sp.1-------------4
Microglossum sp. 2-------------1
Nadsonia commutate--1------1----
Pichia guilliermondii------------1-
Rhodotorula glacialis--------4-----
Rh. laryngis-------1--2---
Rh. mucilaginosa------------31
Sporidiobolus salmonicolor-------------1
Total of isolates2629136117247911

A. Rhizosphere of Deschampsia antarctica Desv. (Poaceae); B. Ornithogenic soil (Demay point); C. Ornithogenic soil (Chabrie Rock); D. Soil (Cmte Ferraz Brazilian Station); E. Soil (Ulmann point); F. Soil (Henry Arctowisky Station); G. Soil (Botany point); H. Lake sediment (Port Foster, Deception Island); I. Marine sediment (Machu Picchu Station); J. Lake sediment (Copacabana United States Refuge); K. Seawater (Botany point); L. Seawater (Ulmann point); M. Freshwater (Copacabana United States Refuge); N. Freshwater (Machu Picchu Station); n= number of samples

Identification of yeasts isolated from different substrates in Antarctica. Yeast species isolated from different sources in Antarctica. A. Rhizosphere of Deschampsia antarctica Desv. (Poaceae); B. Ornithogenic soil (Demay point); C. Ornithogenic soil (Chabrie Rock); D. Soil (Cmte Ferraz Brazilian Station); E. Soil (Ulmann point); F. Soil (Henry Arctowisky Station); G. Soil (Botany point); H. Lake sediment (Port Foster, Deception Island); I. Marine sediment (Machu Picchu Station); J. Lake sediment (Copacabana United States Refuge); K. Seawater (Botany point); L. Seawater (Ulmann point); M. Freshwater (Copacabana United States Refuge); N. Freshwater (Machu Picchu Station); n= number of samples We recovered Cryptococcus antarcticus, Cr. victoriae, Dioszegia hungarica, and Leucosporidium scottii, which are reported psychrophilic yeasts from Antarctica (40). According to Ruisi et al. (34) the majority of yeasts present in Antarctic habitats are psychrotolerants, and others are psychrophiles. The preponderance of psychrotolerance is probably a response to the wide temperature fluctuations in Antarctica that allows microorganisms to survive in unstable environments (29). Cryptococcus victoriae was the most frequently identified species in our study. It was isolated from seven substrates, and most isolates were obtained from the rhizosphere of D. antarctica. It was also isolated from penguin guano, soil, sediment and freshwater samples. Cryptococcus victoriae was originally described from Antarctica, but some occurrences were recorded in Portuguese seawater as well as in the roots of Puccinela distans and Atriplex sagittata and spores of arbuscular mycorrhizal fungi collected in Germany (31, 40). The occurrence of Cr. victoriae in the rhizosphere of D. antarctica and roots of temperate plant species suggests that this yeast may prefer the rhizosphere of plants in cold and temperate ecosystems. Leucosporidium scottii was isolated only from seawater (Table 3). This yeast inhabits low-temperature environments, mostly polar or temperate regions during cold seasons (12). Although the isolates were obtained from seawater in this study, this species is considered to have a widespread distribution and occupy different substrates. The ascomycetous yeast Metschnikowia australis is indigenous to Antarctic seawater (11), and we isolated it from marine sediment and seawater (Table 3). Metschnikowia australis was the predominant yeast species associated with the thalli of the algal species Adenocystis utricularis, Desmarestia anceps, and Palmaria decipiens in Antarctica (23). These algal thalli were reported as a new habitat for M. australis. Therefore, its isolation from seawater substrates in our study suggests a widespread distribution in Antarctica. The rare yeast Nadsonia commutata was isolated from penguin guano soil and seawater sediment. This species was discovered in soil from East Falkland Island in the Atlantic Ocean and from soil in the Carpathian Mountains of Eastern Europe (15). Nadsonia commutata has a low maximum growth temperature (22–27°C) and is considered to be a psychrophilic yeast (25). This is the first report of its occurrence in Antarctica. Four isolates of Rh. glacialis were obtained from marine sediments of the Machu Picchu Station. This yeast is a true psychrophilic species and was originally isolated from alpine glacier cryoconite and mud in a thawing zone on the Stubaier Glacier near Innsbruck in Tyrol, Austria (24). This species was also isolated from subglacial and meltwater glacier sediments in Italy (38). The maximum growth temperature of the type strain of this species is 20°C. However, two isolates in our study were able to grow at 25°C. Several cosmopolitan yeast species including A. pullulans, C. zeylanoides, D. hansenii, I. orientalis, K. ohmeri, P. guilliermondii, Rh. mucilaginosa, and S. salmonicolor were isolated (Table 3). Most of these mesophilic yeasts were isolated at low frequency in water samples and could represent immigrants carried by water or result from human presence in Antarctica. In this work, some yeast isolates showed more than 1% nucleotide differences in the D1/D2 domains of the rRNA gene compared with the most closely related known species and thus could represent novel taxa. The isolate identified as Filobasidium sp. (UFMGCB-ANT39, GenBank access number HQ184184) had 20 substitutions compared to its closest related species, F. capsuligenum. The isolate identified as Dioszegia sp. had almost identical sequences to strain Dioszegia sp. CRUB 1147, which was isolated from altitudinal lakes in Argentina. The Antarctic and Argentinean isolates probably represent a new species closely related to Dioszegia hungarica. Four yeast-like isolates had 97% similarity (10 nucleotide differences and 5 gaps) compared with the type strain Leuconeurospora pulcherrima CBS 343.7 (GenBank accession number AF096193), and they could represent new species. These strains were identified as Leuconeurospora sp. (UFMGCB-ANT62, GenBank access number HQ184181). The yeast-like fungal species identified as Microglossum sp. 1 (UFMGCB-ANT96b, GenBank access number HQ184182) and Microglossum sp. 2 (UFMGCB-ANT96b, GenBank access number HQ184183) had 92% (36 nucleotide differences and 10 gaps) and 89% (43 nucleotide differences and 20 gaps) similarity, respectively, compared with Microglossum rufum AFTOL 1292 (DQ470981). Microglossum sp. 1 differed from Microglossum sp. 2 by nine nucleotides in the D1/D2 domains of the rRNA gene, and both were considered to be two new, distinct species. Activity of at least a single extracellular enzyme was detected in 58 isolates (60% of total yeast isolates) at either 4 or 20°C (Table 4). Cellulolytic and esterase activities were most frequent and were present in 76% of isolates. Significantly higher levels of Tween 80 hydrolysis (t=3.1461; p=0.00192) were observed at 4°C compared to 20°C. No significant differences between temperatures were observed for the other tested enzymatic activities. Most Cr. victoriae isolates were able to hydrolyze Tween 80 and cellulose at 4 and 20°C, most of which were isolated from the rhizosphere of D. antarctica. Most L. scottii isolates could hydrolyze protease and pectinase at pH 7. Furthermore, most of the isolated yeasts were able to hydrolyze the compounds tested at low temperatures, providing further evidence of their metabolic adaptation to cold environments.
Table 4

Extracellular enzymatic activity, mycosporine and pigment production of yeasts from Antarctica.

Number of positive isolates
Yeast speciesLip(trybutirin)AmAEsA (Tween 80) PrAPecA pH7PecA pH5CelAMycbPigmented speciesb
na4°C20°C4°C20°C4°C20°C4°C20°C4°C20°C4°C20°C4°C20°C
Candida glaebosa72--
C. sake21--
C. spencermartinsiae11--
C. zeylanoides111--
Cryptococcus antarcticus1111+-
Cr. victoriae1418859--
Debaryomyces hansenii42--
Dioszegia aurantiaca1++
D. crocea111++
D. hungarica211++
Dioszegia sp.1111++
Exophialla xenobiotica41221113-+
Filobasidium sp.111--
Issatchenkia (Pichia) orientalis111--
Leuconeurospora sp.412221132-+
Leucosporidiella creatinivora5253332122--
Leucosporidiella fragaria7111122--
Leucosporidiella muscorum2221111-+
Leucosporidium scottii6414143312--
Metschnikowia australis21--
Microglossum sp. 14122++
Microglossum sp. 2111++
Nadsonia commutata211111--
Pichia guilliermondii111--
Rhodotorula glacialis44122111-+
Rh. laryngis3211++
Rh. mucilaginosa21-+
Total of isolates84822334221512743331241431

n: number of isolates; Lip: Lipase activity on Trybutirin agar; AmA: Amylolytic activity; EsA: Esterasic activity on Tween 80 agar; PrA: Proteolytic activity; PecA: Pectinolytic activity on pH 7 and pH 5; CelA: Cellulolytic activity; Myc:Mycosporine; +: positive; -: negative.

All isolates belonging to a species with + result were positive for the character.

Extracellular enzymatic activity, mycosporine and pigment production of yeasts from Antarctica. n: number of isolates; Lip: Lipase activity on Trybutirin agar; AmA: Amylolytic activity; EsA: Esterasic activity on Tween 80 agar; PrA: Proteolytic activity; PecA: Pectinolytic activity on pH 7 and pH 5; CelA: Cellulolytic activity; Myc:Mycosporine; +: positive; -: negative. All isolates belonging to a species with + result were positive for the character. In this study, isolates belonging to the Tremellales group, including the pigmented species Dioszegia aurantiaca, D. crocea, D. hungarica and Dioszegia sp. and the non-pigmented species Cr. antarcticus, were mycosporine-positive (Table 4). All of the isolates were obtained from the rhizosphere of D. antarctica. Libkind et al. (22) detected mycosporine production in Dioszegia species isolated from lakes in the Patagonian Mountains, which can be explained by the high-altitude and exposure to high UV radiation. All Cr. victoriae isolates, also belonging to the Tremellales group, were mycosporine-negative. Exophiala xenobiotica and Rh. laryngis also produced mycosporines. Organisms that can synthesize UV-protective compounds can occupy a great diversity of habitats (34), especially those habitats exposed to high UV radiation (22) such as in this work. The ascomycetous yeast-like fungi Microglossum sp. 1 and Microglossum sp. 2 also produced mycosporines. This report is the first of mycosporine-positive yeast-like ascomycetous species in Antarctic environments. Twelve isolated species produced carotenoids or other pigments. Pigment production is a strategy to survive the stressful conditions of Antarctica. Although it does not produce mycosporines, the ubiquitous species R. mucilaginosa enhances UV-B survival by producing the carotenoid pigment torularhodin (27). In our study, 41.7% of the isolated yeasts were able to produce pigments and/or mycosporines and thus could be considered adapted to survive in Antarctica. In addition, most of the yeast isolates had extracellular enzymatic activities at both temperatures tested, indicating that they may be metabolically active in the sampled substrates.
  25 in total

1.  Endophytic fungi community associated with the dicotyledonous plant Colobanthus quitensis (Kunth) Bartl. (Caryophyllaceae) in Antarctica.

Authors:  Luiz Henrique Rosa; Mariana de Lourdes Almeida Vieira; Iara Furtado Santiago; Carlos Augusto Rosa
Journal:  FEMS Microbiol Ecol       Date:  2010-03-30       Impact factor: 4.194

2.  Polyphasic taxonomy of the basidiomycetous yeast genus Rhodosporidium: Rhodosporidium kratochvilovae and related anamorphic species.

Authors:  J P Sampaio; M Gadanho; S Santos; F L Duarte; C Pais; A Fonseca; J W Fell
Journal:  Int J Syst Evol Microbiol       Date:  2001-03       Impact factor: 2.747

3.  Extracellular enzymatic activities of basidiomycetous yeasts isolated from glacial and subglacial waters of northwest Patagonia (Argentina).

Authors:  Silvia Brizzio; Benedetta Turchetti; Virginia de García; Diego Libkind; Pietro Buzzini; María van Broock
Journal:  Can J Microbiol       Date:  2007-04       Impact factor: 2.419

4.  Mycosporines in carotenogenic yeasts.

Authors:  Diego Libkind; Ruben Sommaruga; Horacio Zagarese; Maria van Broock
Journal:  Syst Appl Microbiol       Date:  2005-10       Impact factor: 4.022

5.  Rhodotorula psychrophila sp. nov., Rhodotorula psychrophenolica sp. nov. and Rhodotorula glacialis sp. nov., novel psychrophilic basidiomycetous yeast species isolated from alpine environments.

Authors:  Rosa Margesin; Pierre-Alain Fonteyne; Franz Schinner; José Paulo Sampaio
Journal:  Int J Syst Evol Microbiol       Date:  2007-09       Impact factor: 2.747

6.  Macromolecular synthesis by yeasts under frozen conditions.

Authors:  Pierre Amato; Shawn Doyle; Brent C Christner
Journal:  Environ Microbiol       Date:  2008-12-05       Impact factor: 5.491

7.  Yeasts from high-altitude lakes: influence of UV radiation.

Authors:  Diego Libkind; Martín Moliné; José Paulo Sampaio; Maria van Broock
Journal:  FEMS Microbiol Ecol       Date:  2009-06-22       Impact factor: 4.194

8.  Psychrophilic yeasts in glacial environments of Alpine glaciers.

Authors:  Benedetta Turchetti; Pietro Buzzini; Marta Goretti; Eva Branda; Guglielmina Diolaiuti; Carlo D'Agata; Claudio Smiraglia; Ann Vaughan-Martini
Journal:  FEMS Microbiol Ecol       Date:  2008-01       Impact factor: 4.194

9.  Species delineation in the genus Nadsonia Sydow.

Authors:  W I Golubev; M T Smith; G A Poot; J L Kock
Journal:  Antonie Van Leeuwenhoek       Date:  1989-04       Impact factor: 2.271

10.  Cryptococcus statzelliae sp. nov. and three novel strains of Cryptococcus victoriae, yeasts isolated from Antarctic soils.

Authors:  Skye Thomas-Hall; Kenneth Watson; Gloria Scorzetti
Journal:  Int J Syst Evol Microbiol       Date:  2002-11       Impact factor: 2.747

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  37 in total

1.  Lichensphere: a protected natural microhabitat of the non-lichenised fungal communities living in extreme environments of Antarctica.

Authors:  Iara F Santiago; Marco Aurélio Soares; Carlos A Rosa; Luiz H Rosa
Journal:  Extremophiles       Date:  2015-09-23       Impact factor: 2.395

2.  Fungi Present in Antarctic Deep-Sea Sediments Assessed Using DNA Metabarcoding.

Authors:  Mayara Baptistucci Ogaki; Otávio Henrique Bezerra Pinto; Rosemary Vieira; Arthur Ayres Neto; Peter Convey; Micheline Carvalho-Silva; Carlos Augusto Rosa; Paulo E A S Câmara; Luiz Henrique Rosa
Journal:  Microb Ecol       Date:  2021-01-06       Impact factor: 4.552

3.  Diversity of fungal DNA in lake sediments on Vega Island, north-east Antarctic Peninsula assessed using DNA metabarcoding.

Authors:  Mayara Baptistucci Ogaki; Paulo Eduardo Aguiar Saraiva Câmara; Otávio Henrique Bezerra Pinto; Juan Manuel Lirio; Silvia H Coria; Rosemary Vieira; Micheline Carvalho-Silva; Peter Convey; Carlos Augusto Rosa; Luiz Henrique Rosa
Journal:  Extremophiles       Date:  2021-04-10       Impact factor: 2.395

4.  Taxonomy and richness of yeasts associated with angiosperms, bryophytes, and meltwater biofilms collected in the Antarctic Peninsula.

Authors:  Eskálath Morganna Silva Ferreira; Francisca Maria Pinheiro de Sousa; Luiz Henrique Rosa; Raphael Sanzio Pimenta
Journal:  Extremophiles       Date:  2018-11-29       Impact factor: 2.395

5.  Antarctic rocks from continental Antarctica as source of potential human opportunistic fungi.

Authors:  Vívian N Gonçalves; Fabio S Oliveira; Camila R Carvalho; Carlos E G R Schaefer; Carlos A Rosa; Luiz H Rosa
Journal:  Extremophiles       Date:  2017-06-28       Impact factor: 2.395

6.  Tolerance to Ultraviolet Radiation of Psychrotolerant Yeasts and Analysis of Their Carotenoid, Mycosporine, and Ergosterol Content.

Authors:  Pablo Villarreal; Mario Carrasco; Salvador Barahona; Jennifer Alcaíno; Víctor Cifuentes; Marcelo Baeza
Journal:  Curr Microbiol       Date:  2016-01       Impact factor: 2.188

7.  Taxonomic assessment and enzymes production by yeasts isolated from marine and terrestrial Antarctic samples.

Authors:  A W F Duarte; I Dayo-Owoyemi; F S Nobre; F C Pagnocca; L C S Chaud; A Pessoa; M G A Felipe; L D Sette
Journal:  Extremophiles       Date:  2013-10-11       Impact factor: 2.395

8.  Diversity patterns, ecology and biological activities of fungal communities associated with the endemic macroalgae across the Antarctic peninsula.

Authors:  Laura E Furbino; Valéria M Godinho; Iara F Santiago; Franciane M Pellizari; Tânia M A Alves; Carlos L Zani; Policarpo A S Junior; Alvaro J Romanha; Amanda G O Carvalho; Laura H V G Gil; Carlos A Rosa; Andrew M Minnis; Luiz H Rosa
Journal:  Microb Ecol       Date:  2014-02-09       Impact factor: 4.552

9.  Taxonomy, phylogeny and ecology of cultivable fungi present in seawater gradients across the Northern Antarctica Peninsula.

Authors:  Vívian N Gonçalves; Gislaine A Vitoreli; Graciéle C A de Menezes; Carlos R B Mendes; Eduardo R Secchi; Carlos A Rosa; Luiz H Rosa
Journal:  Extremophiles       Date:  2017-08-30       Impact factor: 2.395

10.  Diversity and bioprospecting of fungal communities associated with endemic and cold-adapted macroalgae in Antarctica.

Authors:  Valéria M Godinho; Laura E Furbino; Iara F Santiago; Franciane M Pellizzari; Nair S Yokoya; Diclá Pupo; Tânia M A Alves; Policarpo A S Junior; Alvaro J Romanha; Carlos L Zani; Charles L Cantrell; Carlos A Rosa; Luiz H Rosa
Journal:  ISME J       Date:  2013-05-23       Impact factor: 10.302

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