| Literature DB >> 24031709 |
Aline B M Vaz1, Luiz H Rosa, Mariana L A Vieira, Virginia de Garcia, Luciana R Brandão, Lia C R S Teixeira, Martin Moliné, Diego Libkind, Maria van Broock, Carlos A Rosa.
Abstract
The diversity of yeasts collected from different sites in Antarctica (Admiralty Bay, King George Island and Port Foster Bay and Deception Island) and their ability to produce extracellular enzymes and mycosporines were studied. Samples were collected during the austral summer season, between November 2006 and January 2007, from the rhizosphere of Deschampsia antarctica, ornithogenic (penguin guano) soil, soil, marine and lake sediments, marine water and freshwater from lakes. A total of 89 isolates belonging to the following genera were recovered: Bensingtonia, Candida, Cryptococcus, Debaryomyces, Dioszegia, Exophiala, Filobasidium, Issatchenkia (Pichia), Kodamaea, Leucosporidium, Leucosporidiella, Metschnikowia, Nadsonia, Pichia, Rhodotorula, and Sporidiobolus, and the yeast-like fungi Aureobasidium, Leuconeurospora and Microglossum. Cryptococcus victoriae was the most frequently identified species. Several species isolated in our study have been previously reported to be Antarctic psychophilic yeasts, including Cr. antarcticus, Cr. victoriae, Dioszegia hungarica and Leucosporidium scottii. The cosmopolitan yeast species A. pullulans, C. zeylanoides, D. hansenii, I. orientalis, K. ohmeri, P. guilliermondii, Rh. mucilaginosa, and S. salmonicolor were also isolated. Five possible new species were identified. Sixty percent of the yeasts had at least one detectable extracellular enzymatic activity. Cryptococcus antarcticus, D. aurantiaca, D. crocea, D. hungarica, Dioszegia sp., E. xenobiotica, Rh. glaciales, Rh. laryngis, Microglossum sp. 1 and Microglossum sp. 2 produced mycosporines. Of the yeast isolates, 41.7% produced pigments and/or mycosporines and could be considered adapted to survive in Antarctica. Most of the yeasts had extracellular enzymatic activities at 4°C and 20°C, indicating that they could be metabolically active in the sampled substrates.Entities:
Keywords: Antarctica; diversity; extracellular enzymes; mycosporines; yeasts
Year: 2011 PMID: 24031709 PMCID: PMC3768797 DOI: 10.1590/S1517-838220110003000012
Source DB: PubMed Journal: Braz J Microbiol ISSN: 1517-8382 Impact factor: 2.476
Location of sampling sites and viable yeast counts isolated in different sources in Antarctica.
| Substrate | Sites and location | Number of samples | Log CFU/g or log CFU/L | Mean Log CFU/g or CFU/L | Standard deviation (Log) |
|---|---|---|---|---|---|
| Rhizosphere of | Machu Picchu Station (62°07’S, 58°23’W); Plaza point (62°03’S, 58°24W); Brazilian Refuge II (62°04’S, 58°25’W) Demay point (62°12’S, 58°19’W); Hennequin point (62°05’S, 58°24’W); Botany point (62°05’S, 8°19’W); Ulmann point (62°05’S, 58°20’W); Henry Arctowisky Station (62°09’S, 58°27’W) | 21 | 2 - 3.2 | 2.4 | 0.4 |
| Ornithogenic (penguin guano) soil | Demay point (62°12’S, 58°19’W); Chabrier Rock (62°11’S, 58°18’W) | 8 | 2 - 3 | 2.1 | 0.3 |
| Soil | Ulmann point (62°05’S, 58°20’W); Henry Arctowisky Station (62°09’S, 58°27’W); Botany point (62°05’S, 8°19’W); Comandante Ferraz Brazilian Station (62°05’S, 58°24’W) | 11 | 2 - 2.9 | 2.3 | 0.3 |
| Sediment | Port Foster, Deception Island (62°55’S, 60°37’W); Macchu Picchu station (62°07’S, 58°23’W); Copacabana United States Refuge (62°10’S, 58°26’W) | 7 | 2 - 3.2 | 2.4 | 0.4 |
| Seawater | Botany point (62°05’S, 58°19’W); Ulmann point (62°05’S, 58°20’W) | 5 | 2 - 2.9 | 2.1 | 0.2 |
| Freshwater from lakes | Macchu Picchu Station (62°07’S, 58°23’W); Copacabana United States Refuge (62°10’S, 58°26’W) | 16 | 2 - 3.7 | 2.3 | 0.5 |
CFU(colony forming units)/g or /L;
Minimal and maximum counts.
Identification of yeasts isolated from different substrates in Antarctica.
| UFMGCB code | Closest related species/GenBank accession numbers | Similarity (%) | Identification |
|---|---|---|---|
| ANT 92 | 100 | ||
| ANT 84, 85 | 99 | ||
| ANT 28, 22, 33, 37, 44, 108, 109 | 99 | ||
| ANT 60, 98 | 100 | ||
| ANT 168 | 100 | ||
| ANT 130 | 99 | ||
| ANT 21 | 99 | ||
| ANT 29, 35, 53, 56, 77, 97, 100, 102, 103, 104, 106, 120, 128, MFA 17 | 99 | ||
| ANT 20, 105, 111, 112 | 99 | ||
| ANT 76 | 99 | ||
| ANT 68 | 99 | ||
| ANT 73, EACF 103 | 99 | ||
| ANT 99 | 98 | ||
| ANT 126, 141, 145, 149 | 99 | ||
| ANT 39 | 94 | ||
| MF 50 | 100 | ||
| MFA 14 | 100 | ||
| ANT 24, 62, 67, 80 | 97 | ||
| ANT 61, 81, 91, 139, 170 | 99 | ||
| ANT 30, 69, 70, 71, 75, 78 | 99 | ||
| ANT 101, 118 | 99 | ||
| ANT 63, 133, 158, 160, 166, EACF 149 | 99 | ||
| ANT 116, 169 | 100 | ||
| ANT 96b, 142, 150, 152 | 92 | ||
| ANT 146 | 89 | ||
| ANT 50, 54 | 100 | ||
| MF 36 | 99 | ||
| ANT 117, 121, 122, 123 | 99 | ||
| ANT 11, 131, 136 | 99 | ||
| ANT 153, MFC14 | 99 | ||
| ANT 86 | 99 |
Yeast species isolated from different sources in Antarctica.
| Identification | Origin of isolates | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A(n=21) | B(n=l) | C(n=7) | D(n=l) | E(n=3) | F(n=6) | G(n=l) | H(n=l) | I(n=4) | J(n=2) | K(n=2) | L(n=3) | M(n=ll) | N(n=5) | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 1 | |
| - | - | 1 | - | 1 | - | - | - | - | - | - | - | - | - | |
| - | 1 | 3 | - | - | 2 | - | - | - | 1 | - | - | - | - | |
| 2 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | 1 | - | - | |
| - | - | - | - | - | - | - | - | - | - | 1 | - | - | - | |
| 1 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 7 | 1 | 2 | - | - | 1 | - | - | 1 | - | - | - | 1 | 1 | |
| 1 | - | - | - | - | 3 | - | - | - | - | - | - | - | - | |
| 1 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 2 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 4 | |
| - | - | - | 1 | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1 | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 3 | - | |
| 2 | - | 1 | - | 1 | - | - | - | - | - | - | - | - | - | |
| 1 | - | - | - | 1 | - | - | - | - | - | - | 2 | - | 1 | |
| 5 | - | 1 | - | - | - | - | - | - | - | - | - | - | - | |
| 1 | - | - | - | - | - | - | - | 1 | - | - | - | - | - | |
| - | - | - | - | - | - | 1 | - | - | - | 2 | 3 | - | - | |
| - | - | - | - | - | - | - | - | 1 | - | - | 1 | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 4 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 1 | |
| - | - | 1 | - | - | - | - | - | - | 1 | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1 | - | |
| - | - | - | - | - | - | - | - | 4 | - | - | - | - | - | |
| - | - | - | - | - | - | - | 1 | - | - | 2 | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 3 | 1 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 1 | |
| Total of isolates | 26 | 2 | 9 | 1 | 3 | 6 | 1 | 1 | 7 | 2 | 4 | 7 | 9 | 11 |
A. Rhizosphere of Deschampsia antarctica Desv. (Poaceae); B. Ornithogenic soil (Demay point); C. Ornithogenic soil (Chabrie Rock); D. Soil (Cmte Ferraz Brazilian Station); E. Soil (Ulmann point); F. Soil (Henry Arctowisky Station); G. Soil (Botany point); H. Lake sediment (Port Foster, Deception Island); I. Marine sediment (Machu Picchu Station); J. Lake sediment (Copacabana United States Refuge); K. Seawater (Botany point); L. Seawater (Ulmann point); M. Freshwater (Copacabana United States Refuge); N. Freshwater (Machu Picchu Station); n= number of samples
Extracellular enzymatic activity, mycosporine and pigment production of yeasts from Antarctica.
| Number of positive isolates | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Yeast species | Lip(trybutirin) | AmA | EsA (Tween 80 | ) PrA | PecA pH7 | PecA pH5 | CelA | Myc | Pigmented species | ||||||||
| n | 4°C | 20°C | 4°C | 20°C | 4°C | 20°C | 4°C | 20°C | 4°C | 20°C | 4°C | 20°C | 4°C | 20°C | |||
| 7 | 2 | - | - | ||||||||||||||
| 2 | 1 | - | - | ||||||||||||||
| 1 | 1 | - | - | ||||||||||||||
| 1 | 1 | 1 | - | - | |||||||||||||
| 1 | 1 | 1 | 1 | + | - | ||||||||||||
| 14 | 1 | 8 | 8 | 5 | 9 | - | - | ||||||||||
| 4 | 2 | - | - | ||||||||||||||
| 1 | + | + | |||||||||||||||
| 1 | 1 | 1 | + | + | |||||||||||||
| 2 | 1 | 1 | + | + | |||||||||||||
| 1 | 1 | 1 | 1 | + | + | ||||||||||||
| 4 | 1 | 2 | 2 | 1 | 1 | 1 | 3 | - | + | ||||||||
| 1 | 1 | 1 | - | - | |||||||||||||
| 1 | 1 | 1 | - | - | |||||||||||||
| 4 | 1 | 2 | 2 | 2 | 1 | 1 | 3 | 2 | - | + | |||||||
| 5 | 2 | 5 | 3 | 3 | 3 | 2 | 1 | 2 | 2 | - | - | ||||||
| 7 | 1 | 1 | 1 | 1 | 2 | 2 | - | - | |||||||||
| 2 | 2 | 2 | 1 | 1 | 1 | 1 | - | + | |||||||||
| 6 | 4 | 1 | 4 | 1 | 4 | 3 | 3 | 1 | 2 | - | - | ||||||
| 2 | 1 | - | - | ||||||||||||||
| 4 | 1 | 2 | 2 | + | + | ||||||||||||
| 1 | 1 | 1 | + | + | |||||||||||||
| 2 | 1 | 1 | 1 | 1 | 1 | - | - | ||||||||||
| 1 | 1 | 1 | - | - | |||||||||||||
| 4 | 4 | 1 | 2 | 2 | 1 | 1 | 1 | - | + | ||||||||
| 3 | 2 | 1 | 1 | + | + | ||||||||||||
| 2 | 1 | - | + | ||||||||||||||
| Total of isolates | 84 | 8 | 2 | 2 | 3 | 34 | 22 | 15 | 12 | 7 | 4 | 3 | 3 | 31 | 24 | 14 | 31 |
n: number of isolates; Lip: Lipase activity on Trybutirin agar; AmA: Amylolytic activity; EsA: Esterasic activity on Tween 80 agar; PrA: Proteolytic activity; PecA: Pectinolytic activity on pH 7 and pH 5; CelA: Cellulolytic activity; Myc:Mycosporine; +: positive; -: negative.
All isolates belonging to a species with + result were positive for the character.