Literature DB >> 24015677

Strong intermolecular vibrational coupling through cyclic hydrogen-bonded structures revealed by ultrafast continuum mid-IR spectroscopy.

Ashley M Stingel1, Carmella Calabrese, Poul B Petersen.   

Abstract

Cyclic hydrogen-bonded structures are common motifs in biological systems, providing structural stability and mediating proton transfer for redox reactions. The mechanism of proton transfer across hydrogen-bonded interfaces depends on the strength of the intermolecular coupling between bridging OH/NH vibrational modes. Here we present a novel ultrafast continuum mid-IR spectroscopy experiment to study the vibrational dynamics of the 7-azaindole-acetic acid (7AI-Ac) heterodimer as a model system for asymmetric cyclic hydrogen-bonded structures. In addition to spreading of the excitation across the whole OH band within the time resolution of the experiment, excitation of a 300 cm(-1) region of the ∼1000 cm(-1) broad OH stretching mode of the acetic acid monomer leads to a frequency shift in the NH stretching mode of the 7AI monomer. This indicates that the NH and OH stretching modes located on the two monomers are strongly coupled despite being separated by 750 cm(-1). The strong coupling further causes the OH and NH bands to decay with a common decay time of ∼2.5 ps. This intermolecular coupling is mediated through the hydrogen-bonded structure of the 7AI-Ac heterodimer and is likely a general property of cyclic hydrogen-bonded structures. Characterizing the vibrational dynamics of and the coupling between the high-frequency OH/NH modes will be important for understanding proton transfer across such molecular interfaces.

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Year:  2013        PMID: 24015677     DOI: 10.1021/jp406441r

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  5 in total

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Journal:  J Mol Model       Date:  2014-08-15       Impact factor: 1.810

3.  Protein Dynamics by Two-Dimensional Infrared Spectroscopy.

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Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2021-07-27       Impact factor: 12.400

4.  Composition-Dependent Hydrogen-Bonding Motifs and Dynamics in Brønsted Acid-Base Mixtures.

Authors:  Christian Malm; Leon A Prädel; Bogdan A Marekha; Maksim Grechko; Johannes Hunger
Journal:  J Phys Chem B       Date:  2020-08-06       Impact factor: 2.991

5.  Lighting up solid states using a rubber.

Authors:  Zhongyu Li; Yanjie Wang; Gleb Baryshnikov; Shen Shen; Man Zhang; Qi Zou; Hans Ågren; Liangliang Zhu
Journal:  Nat Commun       Date:  2021-02-10       Impact factor: 14.919

  5 in total

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