Literature DB >> 25119319

A computational study of hydrogen bonds in intermolecular systems of high complexity: arachno-pentaborane(11)···Y with Y = O2 and N 2.

Abedin Zabardasti1, Hamid Goudarziafshar, Maryam Salehnassaj, Boaz G Oliveira.   

Abstract

The interactions of arachno-B(5)H(11) with N(2) and O(2) were theoretically studied. In the B(5)H(11)···N(2) and B(5)H(11)···O(2) complexes, the terminal hydrogens of B(5)H(11) work as electron donors whereas the bridge ones as electron acceptors. The optimized structures and the corresponding harmonic vibration spectra were investigated through the MP2/aug-cc-pVDZ level of theory. In order to characterize the hydrogen bonds, the topological calculations inherent to the QTAIM protocol and MEP analysis were carried out. The NBO analyses were useful in the interpretation of the red-shifts and blue-shifts on the stretch frequencies of the proton donors, of course in agreement with the Bent rule for the chemical bonding as well as by the conceptions of hyperconjugation or hybridization.

Entities:  

Year:  2014        PMID: 25119319     DOI: 10.1007/s00894-014-2403-5

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  46 in total

1.  Structures, energies, bonding, and NMR properties of pnicogen complexes H2XP:NXH2 (X ═ H, CH3, NH2, OH, F, Cl).

Authors:  Janet E Del Bene; Ibon Alkorta; Goar Sanchez-Sanz; José Elguero
Journal:  J Phys Chem A       Date:  2011-11-02       Impact factor: 2.781

2.  How to determine whether intramolecular H...H interactions can be classified as dihydrogen bonds.

Authors:  Ibon Alkorta; José Elguero; Sławomir J Grabowski
Journal:  J Phys Chem A       Date:  2008-03-01       Impact factor: 2.781

3.  Non-equivalent role of inter- and intramolecular hydrogen bonds in the insulin dimer interface.

Authors:  Emília Antolíková; Lenka Žáková; Johan P Turkenburg; Christopher J Watson; Ivona Hančlová; Miloslav Šanda; Alan Cooper; Tomáš Kraus; A Marek Brzozowski; Jiří Jiráček
Journal:  J Biol Chem       Date:  2011-08-31       Impact factor: 5.157

4.  Strong intermolecular vibrational coupling through cyclic hydrogen-bonded structures revealed by ultrafast continuum mid-IR spectroscopy.

Authors:  Ashley M Stingel; Carmella Calabrese; Poul B Petersen
Journal:  J Phys Chem B       Date:  2013-09-25       Impact factor: 2.991

5.  Confirmation of an early postulate: B-C-B two-electron-three-center bonding in organo(hydro)boranes.

Authors:  Alexander Hübner; Martin Diefenbach; Michael Bolte; Hans-Wolfram Lerner; Max C Holthausen; Matthias Wagner
Journal:  Angew Chem Int Ed Engl       Date:  2012-11-14       Impact factor: 15.336

6.  Hydrogen bonds determine the structures of the ternary heterocyclic complexes C₂H₄O···2HF, C₂H₅N···2HF and C₂H₄S···2HF: density functional theory and topological calculations.

Authors:  Boaz G Oliveira; Regiane C M U Araújo; Antônio B Carvalho; Mozart N Ramos
Journal:  J Mol Model       Date:  2011-02-08       Impact factor: 1.810

7.  Close agreement between the orientation dependence of hydrogen bonds observed in protein structures and quantum mechanical calculations.

Authors:  Alexandre V Morozov; Tanja Kortemme; Kiril Tsemekhman; David Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-26       Impact factor: 11.205

8.  A chemometrical study of intermolecular properties of hydrogen-bonded complexes formed by C2H4O...HX and C2H5N...HX with X = F, CN, NC, and CCH.

Authors:  Boaz G Oliveira; Regiane C M U Araújo; Antônio B Carvalho; Mozart N Ramos
Journal:  J Mol Model       Date:  2008-12-13       Impact factor: 1.810

9.  Role of intramolecular and intermolecular hydrogen bonding in both singlet and triplet excited states of aminofluorenones on internal conversion, intersystem crossing, and twisted intramolecular charge transfer.

Authors:  Guang-Jiu Zhao; Ke-Li Han
Journal:  J Phys Chem A       Date:  2009-12-31       Impact factor: 2.781

10.  Coexistence of dihydrogen, blue- and red-shifting hydrogen bonds in an ultrasmall system: valine.

Authors:  Wenbo Yu; Zijing Lin; Zhijian Huang
Journal:  Chemphyschem       Date:  2006-04-10       Impact factor: 3.102

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  1 in total

1.  The electronic mechanism ruling the dihydrogen bonds and halogen bonds in weakly bound systems of H3SiH···HOX and H 3SiH···XOH (X = F, Cl, and Br).

Authors:  Boaz G Oliveira; Abedin Zabardasti; Hamid Goudarziafshar; Maryam Salehnassaj
Journal:  J Mol Model       Date:  2015-03-10       Impact factor: 1.810

  1 in total

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