Literature DB >> 23995841

Characterization of a highly efficient blue-shifted channelrhodopsin from the marine alga Platymonas subcordiformis.

Elena G Govorunova1, Oleg A Sineshchekov, Hai Li, Roger Janz, John L Spudich.   

Abstract

Rhodopsin photosensors of phototactic algae act as light-gated cation channels when expressed in animal cells. These proteins (channelrhodopsins) are extensively used for millisecond scale photocontrol of cellular functions (optogenetics). We report characterization of PsChR, one of the phototaxis receptors in the alga Platymonas (Tetraselmis) subcordiformis. PsChR exhibited ∼3-fold higher unitary conductance and greater relative permeability for Na(+) ions, as compared with the most frequently used channelrhodopsin-2 from Chlamydomonas reinhardtii (CrChR2). Photocurrents generated by PsChR in HEK293 cells showed lesser inactivation and faster peak recovery than those by CrChR2. Their maximal spectral sensitivity was at 445 nm, making PsChR the most blue-shifted channelrhodopsin so far identified. The λmax of detergent-purified PsChR was 437 nm at neutral pH and exhibited red shifts (pKa values at 6.6 and 3.8) upon acidification. The purified pigment undergoes a photocycle with a prominent red-shifted intermediate whose formation and decay kinetics match the kinetics of channel opening and closing. The rise and decay of an M-like intermediate prior to formation of this putative conductive state were faster than in CrChR2. PsChR mediated sufficient light-induced membrane depolarization in cultured hippocampal neurons to trigger reliable repetitive spiking at the upper threshold frequency of the neurons. At low frequencies spiking probability decreases less with PsChR than with CrChR2 because of the faster recovery of the former. Its blue-shifted absorption enables optogenetics at wavelengths even below 400 nm. A combination of characteristics makes PsChR important for further research on structure-function relationships in ChRs and potentially useful for optogenetics, especially for combinatorial applications when short wavelength excitation is required.

Entities:  

Keywords:  Algae; Channelrhodopsin; Ion Channels; Optogenetics; Photobiology; Photoreceptors; Phototaxis

Mesh:

Substances:

Year:  2013        PMID: 23995841      PMCID: PMC3795289          DOI: 10.1074/jbc.M113.505495

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  63 in total

1.  Rhodopsin-mediated photoreception in cryptophyte flagellates.

Authors:  Oleg A Sineshchekov; Elena G Govorunova; Kwang-Hwan Jung; Stefan Zauner; Uwe-G Maier; John L Spudich
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

2.  Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.

Authors:  Georg Nagel; Martin Brauner; Jana F Liewald; Nona Adeishvili; Ernst Bamberg; Alexander Gottschalk
Journal:  Curr Biol       Date:  2005-12-20       Impact factor: 10.834

3.  Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas.

Authors:  Hongxia Wang; Yuka Sugiyama; Takuya Hikima; Eriko Sugano; Hiroshi Tomita; Tetsuo Takahashi; Toru Ishizuka; Hiromu Yawo
Journal:  J Biol Chem       Date:  2008-12-22       Impact factor: 5.157

4.  Channelrhodopsins of Volvox carteri are photochromic proteins that are specifically expressed in somatic cells under control of light, temperature, and the sex inducer.

Authors:  Arash Kianianmomeni; Katja Stehfest; Ghazaleh Nematollahi; Peter Hegemann; Armin Hallmann
Journal:  Plant Physiol       Date:  2009-07-29       Impact factor: 8.340

5.  Effect of light-adaptation on the photoreaction of bacteriorhodopsin from Halobacterium halobium.

Authors:  K Ohno; Y Takeuchi; M Yoshida
Journal:  Biochim Biophys Acta       Date:  1977-12-23

6.  Probing the function of neuronal populations: combining micromirror-based optogenetic photostimulation with voltage-sensitive dye imaging.

Authors:  Sachiko Tsuda; Michelle Z L Kee; Catarina Cunha; Jinsook Kim; Ping Yan; Leslie M Loew; George J Augustine
Journal:  Neurosci Res       Date:  2012-12-17       Impact factor: 3.304

7.  Visual-pigment spectra: implications of the protonation of the retinal Schiff base.

Authors:  B Honig; A D Greenberg; U Dinur; T G Ebrey
Journal:  Biochemistry       Date:  1976-10-19       Impact factor: 3.162

8.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

9.  Channelrhodopsin-1 initiates phototaxis and photophobic responses in chlamydomonas by immediate light-induced depolarization.

Authors:  Peter Berthold; Satoshi P Tsunoda; Oliver P Ernst; Wolfgang Mages; Dietrich Gradmann; Peter Hegemann
Journal:  Plant Cell       Date:  2008-06-13       Impact factor: 11.277

10.  Optogenetics.

Authors:  Karl Deisseroth
Journal:  Nat Methods       Date:  2010-12-20       Impact factor: 28.547

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  37 in total

1.  Identification of a Natural Green Light Absorbing Chloride Conducting Channelrhodopsin from Proteomonas sulcata.

Authors:  Jonas Wietek; Matthias Broser; Benjamin S Krause; Peter Hegemann
Journal:  J Biol Chem       Date:  2016-01-06       Impact factor: 5.157

Review 2.  Optogenetics enlightens neuroscience drug discovery.

Authors:  Chenchen Song; Thomas Knöpfel
Journal:  Nat Rev Drug Discov       Date:  2015-11-27       Impact factor: 84.694

Review 3.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

4.  Platymonas subcordiformis Channelrhodopsin-2 Function: I. THE PHOTOCHEMICAL REACTION CYCLE.

Authors:  Istvan Szundi; Hai Li; Eefei Chen; Roberto Bogomolni; John L Spudich; David S Kliger
Journal:  J Biol Chem       Date:  2015-05-13       Impact factor: 5.157

5.  Platymonas subcordiformis Channelrhodopsin-2 (PsChR2) Function: II. RELATIONSHIP OF THE PHOTOCHEMICAL REACTION CYCLE TO CHANNEL CURRENTS.

Authors:  Istvan Szundi; Roberto Bogomolni; David S Kliger
Journal:  J Biol Chem       Date:  2015-05-13       Impact factor: 5.157

6.  Structure-Function Relationship of Channelrhodopsins.

Authors:  Hideaki E Kato
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

7.  Structure-guided SCHEMA recombination generates diverse chimeric channelrhodopsins.

Authors:  Claire N Bedbrook; Austin J Rice; Kevin K Yang; Xiaozhe Ding; Siyuan Chen; Emily M LeProust; Viviana Gradinaru; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-10       Impact factor: 11.205

8.  Imaging GFP-based reporters in neurons with multiwavelength optogenetic control.

Authors:  Veena Venkatachalam; Adam E Cohen
Journal:  Biophys J       Date:  2014-10-07       Impact factor: 4.033

9.  A Bright and Fast Red Fluorescent Protein Voltage Indicator That Reports Neuronal Activity in Organotypic Brain Slices.

Authors:  Ahmed S Abdelfattah; Samouil L Farhi; Yongxin Zhao; Daan Brinks; Peng Zou; Araya Ruangkittisakul; Jelena Platisa; Vincent A Pieribone; Klaus Ballanyi; Adam E Cohen; Robert E Campbell
Journal:  J Neurosci       Date:  2016-02-24       Impact factor: 6.167

Review 10.  Novel optogenetics tool: Gt_CCR4, a light-gated cation channel with high reactivity to weak light.

Authors:  Shoko Hososhima; Shunta Shigemura; Hideki Kandori; Satoshi P Tsunoda
Journal:  Biophys Rev       Date:  2020-03-12
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