Literature DB >> 32166612

Novel optogenetics tool: Gt_CCR4, a light-gated cation channel with high reactivity to weak light.

Shoko Hososhima1, Shunta Shigemura1, Hideki Kandori1,2, Satoshi P Tsunoda3,4.   

Abstract

Optogenetics is a growing technique which allows manipulation of biological events simply by illumination. The technique is appreciated especially in the neuroscience field because of its availability in controlling neuronal functions. A light-gated cation channel, Cr_ChR2 from Chlamydomonas reinhardtii, is the first and mostly applied to optogenetics for activating neuronal excitability. In addition, the molecular mechanism of Cr_ChR2 has been intensively studied by electrophysiology, spectroscopy, X-ray structural studies, etc. Novel cation channelrhodopsins from Guillardia theta, namely, Gt_CCR1-4, were discovered in 2016 and 2017. These channelrhodopsins are more homologous to haloarchaeal rhodopsins, particularly the proton pumps. Thus these cryptophyte-type light-gated cation channels are structurally and mechanistically distinct from chlorophyte channelrhodopsin such as Cr_ChR2. We here compared the photocurrent properties, cation selectivity, and kinetics between well-known Cr_ChR2 and Gt_CCR4. The light sensitivity of Gt_CCR4 is significantly higher than that of Cr_ChR2, while the channel open lifetime is in the same range as that of Cr_ChR2. Gt_CCR4 shows high Na+ selectivity in which the selectivity ratio for Na+ was 37-fold larger than that for Cr_ChR2, which primarily conducts H+. On the other hand, Gt_CCR4 conducted almost no H+ and no Ca2+ under physiological conditions. Other unique features and the applicability of Gt_CCR4 for optogenetics were discussed.

Entities:  

Keywords:  Channelrhodopsin; Electrophysiology; Ion channel; Microbial rhodopsin; Optogenetics

Year:  2020        PMID: 32166612      PMCID: PMC7242533          DOI: 10.1007/s12551-020-00676-7

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  43 in total

1.  Millisecond-timescale, genetically targeted optical control of neural activity.

Authors:  Edward S Boyden; Feng Zhang; Ernst Bamberg; Georg Nagel; Karl Deisseroth
Journal:  Nat Neurosci       Date:  2005-08-14       Impact factor: 24.884

2.  Two possible roles of bacteriorhodopsin; a comparative study of strains of Halobacterium halobium differing in pigmentation.

Authors:  A Matsuno-Yagi; Y Mukohata
Journal:  Biochem Biophys Res Commun       Date:  1977-09-09       Impact factor: 3.575

Review 3.  Biophysics of Channelrhodopsin.

Authors:  Franziska Schneider; Christiane Grimm; Peter Hegemann
Journal:  Annu Rev Biophys       Date:  2015       Impact factor: 12.981

4.  A distinct abundant group of microbial rhodopsins discovered using functional metagenomics.

Authors:  Alina Pushkarev; Keiichi Inoue; Shirley Larom; José Flores-Uribe; Manish Singh; Masae Konno; Sahoko Tomida; Shota Ito; Ryoko Nakamura; Satoshi P Tsunoda; Alon Philosof; Itai Sharon; Natalya Yutin; Eugene V Koonin; Hideki Kandori; Oded Béjà
Journal:  Nature       Date:  2018-06-20       Impact factor: 49.962

5.  A light-driven sodium ion pump in marine bacteria.

Authors:  Keiichi Inoue; Hikaru Ono; Rei Abe-Yoshizumi; Susumu Yoshizawa; Hiroyasu Ito; Kazuhiro Kogure; Hideki Kandori
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Channelrhodopsin-2-XXL, a powerful optogenetic tool for low-light applications.

Authors:  Alexej Dawydow; Ronnie Gueta; Dmitrij Ljaschenko; Sybille Ullrich; Moritz Hermann; Nadine Ehmann; Shiqiang Gao; André Fiala; Tobias Langenhan; Georg Nagel; Robert J Kittel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-08       Impact factor: 11.205

7.  Structural insights into ion conduction by channelrhodopsin 2.

Authors:  Oleksandr Volkov; Kirill Kovalev; Vitaly Polovinkin; Valentin Borshchevskiy; Christian Bamann; Roman Astashkin; Egor Marin; Alexander Popov; Taras Balandin; Dieter Willbold; Georg Büldt; Ernst Bamberg; Valentin Gordeliy
Journal:  Science       Date:  2017-11-24       Impact factor: 47.728

8.  Rhodopsin-like protein from the purple membrane of Halobacterium halobium.

Authors:  D Oesterhelt; W Stoeckenius
Journal:  Nat New Biol       Date:  1971-09-29

9.  NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.

Authors:  Elena G Govorunova; Oleg A Sineshchekov; Roger Janz; Xiaoqin Liu; John L Spudich
Journal:  Science       Date:  2015-06-25       Impact factor: 47.728

10.  A natural light-driven inward proton pump.

Authors:  Keiichi Inoue; Shota Ito; Yoshitaka Kato; Yurika Nomura; Mikihiro Shibata; Takayuki Uchihashi; Satoshi P Tsunoda; Hideki Kandori
Journal:  Nat Commun       Date:  2016-11-17       Impact factor: 14.919

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  3 in total

1.  Biophysical Reviews' national biophysical society partnership program.

Authors:  Damien Hall
Journal:  Biophys Rev       Date:  2020-04-29

Review 2.  Is there an unmet medical need for improved hearing restoration?

Authors:  Bettina Julia Wolf; Kathrin Kusch; Victoria Hunniford; Barbara Vona; Robert Kühler; Daniel Keppeler; Nicola Strenzke; Tobias Moser
Journal:  EMBO Mol Med       Date:  2022-07-14       Impact factor: 14.260

Review 3.  Applications and challenges of rhodopsin-based optogenetics in biomedicine.

Authors:  Hanci Zhang; Hui Fang; Deqiang Liu; Yiming Zhang; Joseph Adu-Amankwaah; Jinxiang Yuan; Rubin Tan; Jianping Zhu
Journal:  Front Neurosci       Date:  2022-09-23       Impact factor: 5.152

  3 in total

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