Literature DB >> 23982692

A novel locus for episodic ataxia:UBR4 the likely candidate.

Judith Conroy1, Paul McGettigan2, Raymond Murphy3, David Webb4, Sinéad M Murphy3, Blathnaid McCoy4, Christine Albertyn3, Dara McCreary1, Cara McDonagh3, Orla Walsh4, Sallyann Lynch5, Sean Ennis6.   

Abstract

Episodic ataxias (EAs) are rare neurological channelopathies that are characterized by spells of imbalance and a lack of co-ordination. There are seven clinically recognized EAs and multiple isolated cases. Five disease-causing genes have been identified to date. We describe a novel form of autosomal dominant EA in a large three-generation Irish family. This form of EA presents in early childhood with periods of unsteadiness generalized weakness and slurred speech during an attack, which may be triggered by physical tiredness or stress. Linkage analysis undertaken in 13 related individuals identified a single disease locus (1p36.13-p34.3) with a LOD score of 3.29. Exome sequencing was performed. Following data analysis, which included presence/absence within the linkage peak, two candidate variants were identified. These are located in the HSPG2 and UBR4 genes. UBR4 is an ubiquitin ligase protein that is known to interact with calmodulin, a Ca(2+) protein, in the cytoplasm. It also co-localizes with ITPR1 a calcium release channel that is a major determinant of mammal co-ordination. Although UBR4 is not an ion channel gene, the potential for disrupted Ca(2+) control within neuronal cells highlights its potential for a role in this form of EA.

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Year:  2013        PMID: 23982692      PMCID: PMC3953901          DOI: 10.1038/ejhg.2013.173

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  47 in total

1.  Expression of a calmodulin-binding KCNQ2 potassium channel fragment modulates neuronal M-current and membrane excitability.

Authors:  Mohammad Shahidullah; Lindsey Ciali Santarelli; Hua Wen; Irwin B Levitan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-01       Impact factor: 11.205

2.  PMUT: a web-based tool for the annotation of pathological mutations on proteins.

Authors:  Carles Ferrer-Costa; Josep Lluis Gelpí; Leire Zamakola; Ivan Parraga; Xavier de la Cruz; Modesto Orozco
Journal:  Bioinformatics       Date:  2005-05-06       Impact factor: 6.937

Review 3.  Regulation of voltage-gated Ca2+ channels by calmodulin.

Authors:  D Brent Halling; Paula Aracena-Parks; Susan L Hamilton
Journal:  Sci STKE       Date:  2005-12-20

4.  Altered Purkinje cell responses and calmodulin expression in the spontaneously ataxic mouse, Pogo.

Authors:  Kwan Young Lee; Jin Seong Kim; Se Hoon Kim; Hyung Seo Park; Young-Gil Jeong; Nam-Seob Lee; Dong Kwan Kim
Journal:  Eur J Neurosci       Date:  2011-03-17       Impact factor: 3.386

5.  Coding and noncoding variation of the human calcium-channel beta4-subunit gene CACNB4 in patients with idiopathic generalized epilepsy and episodic ataxia.

Authors:  A Escayg; M De Waard; D D Lee; D Bichet; P Wolf; T Mayer; J Johnston; R Baloh; T Sander; M H Meisler
Journal:  Am J Hum Genet       Date:  2000-04-04       Impact factor: 11.025

6.  Clinical spectrum of episodic ataxia type 2.

Authors:  J Jen; G W Kim; R W Baloh
Journal:  Neurology       Date:  2004-01-13       Impact factor: 9.910

7.  Large Genomic Deletions in CACNA1A Cause Episodic Ataxia Type 2.

Authors:  Jijun Wan; Hafsa Mamsa; Janine L Johnston; Elizabeth L Spriggs; Harvey S Singer; David S Zee; Alhamza R Al-Bayati; Robert W Baloh; Joanna C Jen
Journal:  Front Neurol       Date:  2011-09-09       Impact factor: 4.003

8.  PRRT2 gene mutations: from paroxysmal dyskinesia to episodic ataxia and hemiplegic migraine.

Authors:  Alice R Gardiner; Kailash P Bhatia; Maria Stamelou; Russell C Dale; Manju A Kurian; Susanne A Schneider; G M Wali; Tim Counihan; Anthony H Schapira; Sian D Spacey; Enza-Maria Valente; Laura Silveira-Moriyama; Hélio A G Teive; Salmo Raskin; Josemir W Sander; Andrew Lees; Tom Warner; Dimitri M Kullmann; Nicholas W Wood; Michael Hanna; Henry Houlden
Journal:  Neurology       Date:  2012-10-17       Impact factor: 9.910

9.  SNAP: predict effect of non-synonymous polymorphisms on function.

Authors:  Yana Bromberg; Burkhard Rost
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971

10.  Deletion at ITPR1 underlies ataxia in mice and spinocerebellar ataxia 15 in humans.

Authors:  Joyce van de Leemput; Jayanth Chandran; Melanie A Knight; Lynne A Holtzclaw; Sonja Scholz; Mark R Cookson; Henry Houlden; Katrina Gwinn-Hardy; Hon-Chung Fung; Xian Lin; Dena Hernandez; Javier Simon-Sanchez; Nick W Wood; Paola Giunti; Ian Rafferty; John Hardy; Elsdon Storey; R J McKinlay Gardner; Susan M Forrest; Elizabeth M C Fisher; James T Russell; Huaibin Cai; Andrew B Singleton
Journal:  PLoS Genet       Date:  2007-05-16       Impact factor: 5.917

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  29 in total

Review 1.  Genetic landscape remodelling in spinocerebellar ataxias: the influence of next-generation sequencing.

Authors:  Marie Coutelier; Giovanni Stevanin; Alexis Brice
Journal:  J Neurol       Date:  2015-04-11       Impact factor: 4.849

2.  A novel frameshift mutation in FGF14 causes an autosomal dominant episodic ataxia.

Authors:  Karine Choquet; Roberta La Piana; Bernard Brais
Journal:  Neurogenetics       Date:  2015-01-08       Impact factor: 2.660

Review 3.  The Clinical Spectrum of Autosomal-Dominant Episodic Ataxias.

Authors:  Stefan Kipfer; Michael Strupp
Journal:  Mov Disord Clin Pract       Date:  2014-07-28

4.  KCMF1 (potassium channel modulatory factor 1) Links RAD6 to UBR4 (ubiquitin N-recognin domain-containing E3 ligase 4) and lysosome-mediated degradation.

Authors:  Jenny H Hong; Lilia Kaustov; Etienne Coyaud; Tharan Srikumar; Janet Wan; Cheryl Arrowsmith; Brian Raught
Journal:  Mol Cell Proteomics       Date:  2015-01-12       Impact factor: 5.911

5.  A novel mutation in SLC1A3 causes episodic ataxia.

Authors:  Kazuhiro Iwama; Aya Iwata; Masaaki Shiina; Satomi Mitsuhashi; Satoko Miyatake; Atsushi Takata; Noriko Miyake; Kazuhiro Ogata; Shuichi Ito; Takeshi Mizuguchi; Naomichi Matsumoto
Journal:  J Hum Genet       Date:  2017-12-05       Impact factor: 3.172

Review 6.  Paroxysmal Movement Disorders: Recent Advances.

Authors:  Zheyu Xu; Che-Kang Lim; Louis C S Tan; Eng-King Tan
Journal:  Curr Neurol Neurosci Rep       Date:  2019-06-11       Impact factor: 5.081

7.  Episodic Ataxia Secondary to CEP290 Compound Heterozygous Mutations: A Case Report.

Authors:  Moath Hamed; Aakash Shetty; Tara Dzwiniel; Mark Buller; Lotta Koskinen; Oksana Suchowersky
Journal:  Mov Disord Clin Pract       Date:  2019-12-06

Review 8.  p600/UBR4 in the central nervous system.

Authors:  Kari Parsons; Yoshihiro Nakatani; Minh Dang Nguyen
Journal:  Cell Mol Life Sci       Date:  2014-11-26       Impact factor: 9.261

Review 9.  Rare neurological channelopathies--networks to study patients, pathogenesis and treatment.

Authors:  Joanna C Jen; Tetsuo Ashizawa; Robert C Griggs; Michael F Waters
Journal:  Nat Rev Neurol       Date:  2016-03-04       Impact factor: 42.937

Review 10.  Paroxysmal Movement Disorders.

Authors:  Susan Harvey; Mary D King; Kathleen M Gorman
Journal:  Front Neurol       Date:  2021-06-11       Impact factor: 4.003

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