Literature DB >> 25862482

Genetic landscape remodelling in spinocerebellar ataxias: the influence of next-generation sequencing.

Marie Coutelier1,2,3,4,5,6, Giovanni Stevanin7,8,9,10,11,12, Alexis Brice13,14,15,16,17.   

Abstract

Hereditary cerebellar ataxias (HCAs) are clinically and genetically heterogeneous neurodegenerative disorders, characterised by a cerebellar syndrome and other neurological or non-neurological signs. So far, more than 20 genes have been described in autosomal dominant HCA; in autosomal recessive HCA, even more genes are involved, in often more complex phenotypes. Because of that complexity, the genetic diagnosis of these diseases is often based on the next-generation sequencing techniques. In this review paper, we discuss the major contributions that they have made to the genetic landscape of HCAs. Numerous novel genes have been identified; still more have recently been implicated in HCAs in addition to being responsible for other diseases. The phenotypic spectrum associated with a single gene constantly gains in complexity. Novel types of mutations or transmissions in known genes are regularly being identified. All these factors make genotype-phenotype correlations particularly difficult. Some but not all of this variability can be explained by different pathophysiological consequences (loss of function, gain of function, variable levels of haploinsufficiency). This also raises the question of modifier genes. Finally, we highlight some functional pathways that increasingly appear important in HCAs.

Entities:  

Keywords:  Genotype-phenotype delineation; Next generation sequencing; Novel genes; Pathways; Spinocerebellar ataxia

Mesh:

Year:  2015        PMID: 25862482     DOI: 10.1007/s00415-015-7725-4

Source DB:  PubMed          Journal:  J Neurol        ISSN: 0340-5354            Impact factor:   4.849


  111 in total

1.  Recessive dystonia-ataxia syndrome in a Turkish family caused by a COX20 (FAM36A) mutation.

Authors:  Sarah Doss; Katja Lohmann; Philip Seibler; Björn Arns; Thomas Klopstock; Christine Zühlke; Karen Freimann; Susen Winkler; Thora Lohnau; Mario Drungowski; Peter Nürnberg; Karin Wiegers; Ebba Lohmann; Sadaf Naz; Meike Kasten; Georg Bohner; Alfredo Ramirez; Matthias Endres; Christine Klein
Journal:  J Neurol       Date:  2013-11-08       Impact factor: 4.849

2.  A conserved eEF2 coding variant in SCA26 leads to loss of translational fidelity and increased susceptibility to proteostatic insult.

Authors:  Katherine E Hekman; Guo-Yun Yu; Christopher D Brown; Haipeng Zhu; Xiaofei Du; Kristina Gervin; Dag Erik Undlien; April Peterson; Giovanni Stevanin; H Brent Clark; Stefan M Pulst; Thomas D Bird; Kevin P White; Christopher M Gomez
Journal:  Hum Mol Genet       Date:  2012-09-21       Impact factor: 6.150

3.  A decamer duplication in the 3' region of the BRI gene originates an amyloid peptide that is associated with dementia in a Danish kindred.

Authors:  R Vidal; T Revesz; A Rostagno; E Kim; J L Holton; T Bek; M Bojsen-Møller; H Braendgaard; G Plant; J Ghiso; B Frangione
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

4.  Neurodegeneration in Lurcher mice caused by mutation in delta2 glutamate receptor gene.

Authors:  J Zuo; P L De Jager; K A Takahashi; W Jiang; D J Linden; N Heintz
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

5.  Corticobasal and ataxia syndromes widen the spectrum of C9ORF72 hexanucleotide expansion disease.

Authors:  S G Lindquist; M Duno; M Batbayli; A Puschmann; H Braendgaard; S Mardosiene; K Svenstrup; L H Pinborg; K Vestergaard; L E Hjermind; J Stokholm; B B Andersen; P Johannsen; J E Nielsen
Journal:  Clin Genet       Date:  2012-07-04       Impact factor: 4.438

Review 6.  The fragile-X premutation: a maturing perspective.

Authors:  Paul J Hagerman; Randi J Hagerman
Journal:  Am J Hum Genet       Date:  2004-03-29       Impact factor: 11.025

7.  FGF14 regulates the intrinsic excitability of cerebellar Purkinje neurons.

Authors:  Vikram G Shakkottai; Maolei Xiao; Lin Xu; Michael Wong; Jeanne M Nerbonne; David M Ornitz; Kelvin A Yamada
Journal:  Neurobiol Dis       Date:  2008-10-01       Impact factor: 5.996

8.  Modulation of the age at onset in spinocerebellar ataxia by CAG tracts in various genes.

Authors:  Sophie Tezenas du Montcel; Alexandra Durr; Peter Bauer; Karla P Figueroa; Yaeko Ichikawa; Alessandro Brussino; Sylvie Forlani; Maria Rakowicz; Ludger Schöls; Caterina Mariotti; Bart P C van de Warrenburg; Laura Orsi; Paola Giunti; Alessandro Filla; Sandra Szymanski; Thomas Klockgether; José Berciano; Massimo Pandolfo; Sylvia Boesch; Bela Melegh; Dagmar Timmann; Paola Mandich; Agnès Camuzat; Jun Goto; Tetsuo Ashizawa; Cécile Cazeneuve; Shoji Tsuji; Stefan-M Pulst; Alfredo Brusco; Olaf Riess; Alexis Brice; Giovanni Stevanin
Journal:  Brain       Date:  2014-06-26       Impact factor: 13.501

9.  Next generation sequencing with copy number variant detection expands the phenotypic spectrum of HSD17B4-deficiency.

Authors:  Daniel S Lieber; Steven G Hershman; Nancy G Slate; Sarah E Calvo; Katherine B Sims; Jeremy D Schmahmann; Vamsi K Mootha
Journal:  BMC Med Genet       Date:  2014-03-06       Impact factor: 2.103

10.  Familial cortical myoclonus with a mutation in NOL3.

Authors:  Jonathan F Russell; Jamie L Steckley; Giovanni Coppola; Angelika F G Hahn; MacKenzie A Howard; Zachary Kornberg; Alden Huang; Seyed M Mirsattari; Barry Merriman; Eric Klein; Murim Choi; Hsien-Yang Lee; Andrew Kirk; Carol Nelson-Williams; Gillian Gibson; Scott C Baraban; Richard P Lifton; Daniel H Geschwind; Ying-Hui Fu; Louis J Ptáček
Journal:  Ann Neurol       Date:  2012-08       Impact factor: 10.422

View more
  8 in total

Review 1.  Using the shared genetics of dystonia and ataxia to unravel their pathogenesis.

Authors:  Esther A R Nibbeling; Cathérine C S Delnooz; Tom J de Koning; Richard J Sinke; Hyder A Jinnah; Marina A J Tijssen; Dineke S Verbeek
Journal:  Neurosci Biobehav Rev       Date:  2017-01-28       Impact factor: 8.989

2.  Hereditary spastic paraplegias: identification of a novel SPG57 variant affecting TFG oligomerization and description of HSP subtypes in Sudan.

Authors:  Liena E O Elsayed; Inaam N Mohammed; Ahlam A A Hamed; Maha A Elseed; Adam Johnson; Mathilde Mairey; Hassab Elrasoul S A Mohamed; Mohamed N Idris; Mustafa A M Salih; Sarah M El-Sadig; Mahmoud E Koko; Ashraf Y O Mohamed; Laure Raymond; Marie Coutelier; Frédéric Darios; Rayan A Siddig; Ahmed K M A Ahmed; Arwa M A Babai; Hiba M O Malik; Zulfa M B M Omer; Eman O E Mohamed; Hanan B Eltahir; Nasr Aldin A Magboul; Elfatih E Bushara; Abdelrahman Elnour; Salah M Abdel Rahim; Abdelmoneim Alattaya; Mustafa I Elbashir; Muntaser E Ibrahim; Alexandra Durr; Anjon Audhya; Alexis Brice; Ammar E Ahmed; Giovanni Stevanin
Journal:  Eur J Hum Genet       Date:  2016-09-07       Impact factor: 4.246

3.  Efficacy of Exome-Targeted Capture Sequencing to Detect Mutations in Known Cerebellar Ataxia Genes.

Authors:  Marie Coutelier; Monia B Hammer; Giovanni Stevanin; Marie-Lorraine Monin; Claire-Sophie Davoine; Fanny Mochel; Pierre Labauge; Claire Ewenczyk; Jinhui Ding; J Raphael Gibbs; Didier Hannequin; Judith Melki; Annick Toutain; Vincent Laugel; Sylvie Forlani; Perrine Charles; Emmanuel Broussolle; Stéphane Thobois; Alexandra Afenjar; Mathieu Anheim; Patrick Calvas; Giovanni Castelnovo; Thomas de Broucker; Marie Vidailhet; Antoine Moulignier; Robert T Ghnassia; Chantal Tallaksen; Cyril Mignot; Cyril Goizet; Isabelle Le Ber; Elisabeth Ollagnon-Roman; Jean Pouget; Alexis Brice; Andrew Singleton; Alexandra Durr
Journal:  JAMA Neurol       Date:  2018-05-01       Impact factor: 18.302

4.  A Recurrent Mutation in CACNA1G Alters Cav3.1 T-Type Calcium-Channel Conduction and Causes Autosomal-Dominant Cerebellar Ataxia.

Authors:  Marie Coutelier; Iulia Blesneac; Arnaud Monteil; Marie-Lorraine Monin; Kunie Ando; Emeline Mundwiller; Alfredo Brusco; Isabelle Le Ber; Mathieu Anheim; Anna Castrioto; Charles Duyckaerts; Alexis Brice; Alexandra Durr; Philippe Lory; Giovanni Stevanin
Journal:  Am J Hum Genet       Date:  2015-10-08       Impact factor: 11.025

Review 5.  The role of gene variants in the pathogenesis of neurodegenerative disorders as revealed by next generation sequencing studies: a review.

Authors:  Shirley Yin-Yu Pang; Kay-Cheong Teo; Jacob Shujui Hsu; Richard Shek-Kwan Chang; Miaoxin Li; Pak-Chung Sham; Shu-Leong Ho
Journal:  Transl Neurodegener       Date:  2017-10-06       Impact factor: 8.014

6.  Pure Cerebellar Ataxia with Homozygous Mutations in the PNPLA6 Gene.

Authors:  Sarah Wiethoff; Conceição Bettencourt; Reema Paudel; Prochi Madon; Yo-Tsen Liu; Joshua Hersheson; Noshir Wadia; Joy Desai; Henry Houlden
Journal:  Cerebellum       Date:  2017-02       Impact factor: 3.847

7.  Biallelic CHP1 mutation causes human autosomal recessive ataxia by impairing NHE1 function.

Authors:  Natalia Mendoza-Ferreira; Marie Coutelier; Eva Janzen; Seyyedmohsen Hosseinibarkooie; Heiko Löhr; Svenja Schneider; Janine Milbradt; Mert Karakaya; Markus Riessland; Christian Pichlo; Laura Torres-Benito; Andrew Singleton; Stephan Zuchner; Alexis Brice; Alexandra Durr; Matthias Hammerschmidt; Giovanni Stevanin; Brunhilde Wirth
Journal:  Neurol Genet       Date:  2018-01-19

Review 8.  Spinocerebellar ataxia: an update.

Authors:  Roisin Sullivan; Wai Yan Yau; Emer O'Connor; Henry Houlden
Journal:  J Neurol       Date:  2018-10-03       Impact factor: 4.849

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.