Literature DB >> 23979577

Transgene-free genome editing in Caenorhabditis elegans using CRISPR-Cas.

Hui Chiu1, Hillel T Schwartz, Igor Antoshechkin, Paul W Sternberg.   

Abstract

CRISPR-Cas is an efficient method for genome editing in organisms from bacteria to human cells. We describe a transgene-free method for CRISPR-Cas-mediated cleavage in nematodes, enabling RNA-homology-targeted deletions that cause loss of gene function; analysis of whole-genome sequencing indicates that the nuclease activity is highly specific.

Entities:  

Keywords:  CRISPR; Caenorhabditis elegans; genome resequencing; reverse genetics; targeted nuclease

Mesh:

Substances:

Year:  2013        PMID: 23979577      PMCID: PMC3813845          DOI: 10.1534/genetics.113.155879

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  28 in total

Review 1.  Genome editing with engineered zinc finger nucleases.

Authors:  Fyodor D Urnov; Edward J Rebar; Michael C Holmes; H Steve Zhang; Philip D Gregory
Journal:  Nat Rev Genet       Date:  2010-09       Impact factor: 53.242

2.  Mobilization of a Drosophila transposon in the Caenorhabditis elegans germ line.

Authors:  J L Bessereau; A Wright; D C Williams; K Schuske; M W Davis; E M Jorgensen
Journal:  Nature       Date:  2001-09-06       Impact factor: 49.962

3.  Reverse genetics by chemical mutagenesis in Caenorhabditis elegans.

Authors:  G Jansen; E Hazendonk; K L Thijssen; R H Plasterk
Journal:  Nat Genet       Date:  1997-09       Impact factor: 38.330

4.  Targeted engineering of the Caenorhabditis elegans genome following Mos1-triggered chromosomal breaks.

Authors:  Valérie Robert; Jean-Louis Bessereau
Journal:  EMBO J       Date:  2006-12-07       Impact factor: 11.598

5.  Characterization of mutations induced by ethyl methanesulfonate, UV, and trimethylpsoralen in the nematode Caenorhabditis elegans.

Authors:  K Gengyo-Ando; S Mitani
Journal:  Biochem Biophys Res Commun       Date:  2000-03-05       Impact factor: 3.575

Review 6.  Genome sequence of the nematode C. elegans: a platform for investigating biology.

Authors: 
Journal:  Science       Date:  1998-12-11       Impact factor: 47.728

7.  Site-selected insertion of the transposon Tc1 into a Caenorhabditis elegans myosin light chain gene.

Authors:  A M Rushforth; B Saari; P Anderson
Journal:  Mol Cell Biol       Date:  1993-02       Impact factor: 4.272

8.  The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.

Authors:  Lincoln D Stein; Zhirong Bao; Darin Blasiar; Thomas Blumenthal; Michael R Brent; Nansheng Chen; Asif Chinwalla; Laura Clarke; Chris Clee; Avril Coghlan; Alan Coulson; Peter D'Eustachio; David H A Fitch; Lucinda A Fulton; Robert E Fulton; Sam Griffiths-Jones; Todd W Harris; LaDeana W Hillier; Ravi Kamath; Patricia E Kuwabara; Elaine R Mardis; Marco A Marra; Tracie L Miner; Patrick Minx; James C Mullikin; Robert W Plumb; Jane Rogers; Jacqueline E Schein; Marc Sohrmann; John Spieth; Jason E Stajich; C Wei; David Willey; Richard K Wilson; Richard Durbin; Robert H Waterston
Journal:  PLoS Biol       Date:  2003-11-17       Impact factor: 8.029

9.  Improved detection of small deletions in complex pools of DNA.

Authors:  Mark Edgley; Anil D'Souza; Gary Moulder; Sheldon McKay; Bin Shen; Erin Gilchrist; Donald Moerman; Robert Barstead
Journal:  Nucleic Acids Res       Date:  2002-06-15       Impact factor: 16.971

Review 10.  DNA double-strand break repair in Caenorhabditis elegans.

Authors:  Bennie B L G Lemmens; Marcel Tijsterman
Journal:  Chromosoma       Date:  2010-11-05       Impact factor: 4.316

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  59 in total

1.  Targeted Chromosomal Translocations and Essential Gene Knockout Using CRISPR/Cas9 Technology in Caenorhabditis elegans.

Authors:  Xiangyang Chen; Mu Li; Xuezhu Feng; Shouhong Guang
Journal:  Genetics       Date:  2015-10-19       Impact factor: 4.562

2.  Target specificity of the CRISPR-Cas9 system.

Authors:  Xuebing Wu; Andrea J Kriz; Phillip A Sharp
Journal:  Quant Biol       Date:  2014-06

3.  Autism-associated missense genetic variants impact locomotion and neurodevelopment in Caenorhabditis elegans.

Authors:  Wan-Rong Wong; Katherine I Brugman; Shayda Maher; Jun Young Oh; Kevin Howe; Mihoko Kato; Paul W Sternberg
Journal:  Hum Mol Genet       Date:  2019-07-01       Impact factor: 6.150

4.  RNA-guided nucleases: a new era for engineering the genomes of model and nonmodel organisms.

Authors:  Kent G Golic
Journal:  Genetics       Date:  2013-10       Impact factor: 4.562

Review 5.  Exciting prospects for precise engineering of Caenorhabditis elegans genomes with CRISPR/Cas9.

Authors:  Christian Frøkjær-Jensen
Journal:  Genetics       Date:  2013-11       Impact factor: 4.562

6.  Streamlined Genome Engineering with a Self-Excising Drug Selection Cassette.

Authors:  Daniel J Dickinson; Ariel M Pani; Jennifer K Heppert; Christopher D Higgins; Bob Goldstein
Journal:  Genetics       Date:  2015-06-03       Impact factor: 4.562

7.  Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells.

Authors:  Xuebing Wu; David A Scott; Andrea J Kriz; Anthony C Chiu; Patrick D Hsu; Daniel B Dadon; Albert W Cheng; Alexandro E Trevino; Silvana Konermann; Sidi Chen; Rudolf Jaenisch; Feng Zhang; Phillip A Sharp
Journal:  Nat Biotechnol       Date:  2014-04-20       Impact factor: 54.908

8.  Dramatic enhancement of genome editing by CRISPR/Cas9 through improved guide RNA design.

Authors:  Behnom Farboud; Barbara J Meyer
Journal:  Genetics       Date:  2015-02-18       Impact factor: 4.562

Review 9.  CRISPR-Cas systems for editing, regulating and targeting genomes.

Authors:  Jeffry D Sander; J Keith Joung
Journal:  Nat Biotechnol       Date:  2014-03-02       Impact factor: 54.908

Review 10.  CRISPR-based technologies: prokaryotic defense weapons repurposed.

Authors:  Rebecca M Terns; Michael P Terns
Journal:  Trends Genet       Date:  2014-02-18       Impact factor: 11.639

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