Literature DB >> 23959879

Cotranslational folding of membrane proteins probed by arrest-peptide-mediated force measurements.

Florian Cymer1, Gunnar von Heijne.   

Abstract

Polytopic membrane proteins are inserted cotranslationally into target membranes by ribosome-translocon complexes. It is, however, unclear when during the insertion process specific interactions between the transmembrane helices start to form. Here, we use a recently developed in vivo technique to measure pulling forces acting on transmembrane helices during their cotranslational insertion into the inner membrane of Escherichia coli to study the earliest steps of tertiary folding of five polytopic membrane proteins. We find that interactions between residues in a C-terminally located transmembrane helix and in more N-terminally located helices can be detected already at the point when the C-terminal helix partitions from the translocon into the membrane. Our findings pinpoint the earliest steps of tertiary structure formation and open up possibilities to study the cotranslational folding of polytopic membrane proteins.

Entities:  

Keywords:  helix-helix interactions; membrane insertion; protein folding

Mesh:

Substances:

Year:  2013        PMID: 23959879      PMCID: PMC3767533          DOI: 10.1073/pnas.1306787110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Secretion monitor, SecM, undergoes self-translation arrest in the cytosol.

Authors:  H Nakatogawa; K Ito
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

2.  Charge pair interactions in a model transmembrane helix in the ER membrane.

Authors:  C N Chin; G von Heijne
Journal:  J Mol Biol       Date:  2000-10-13       Impact factor: 5.469

3.  The ribosomal exit tunnel functions as a discriminating gate.

Authors:  Hitoshi Nakatogawa; Koreaki Ito
Journal:  Cell       Date:  2002-03-08       Impact factor: 41.582

4.  Primary role for endoplasmic reticulum-bound ribosomes in cellular translation identified by ribosome profiling.

Authors:  David W Reid; Christopher V Nicchitta
Journal:  J Biol Chem       Date:  2011-12-23       Impact factor: 5.157

5.  In vitro association of fragments of a beta-sheet membrane protein.

Authors:  D Debnath; K L Nielsen; D E Otzen
Journal:  Biophys Chem       Date:  2010-03-16       Impact factor: 2.352

6.  Simulating the pulling of stalled elongated peptide from the ribosome by the translocon.

Authors:  Anna Rychkova; Shayantani Mukherjee; Ram Prasad Bora; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-31       Impact factor: 11.205

7.  Charge pair interactions in transmembrane helices and turn propensity of the connecting sequence promote helical hairpin insertion.

Authors:  Manuel Bañó-Polo; Luis Martínez-Gil; Björn Wallner; José L Nieva; Arne Elofsson; Ismael Mingarro
Journal:  J Mol Biol       Date:  2012-12-07       Impact factor: 5.469

8.  Reconstitutive refolding of diacylglycerol kinase, an integral membrane protein.

Authors:  B M Gorzelle; J K Nagy; K Oxenoid; W L Lonzer; D S Cafiso; C R Sanders
Journal:  Biochemistry       Date:  1999-12-07       Impact factor: 3.162

9.  Structural basis of Na(+)-independent and cooperative substrate/product antiport in CaiT.

Authors:  Sabrina Schulze; Stefan Köster; Ulrike Geldmacher; Anke C Terwisscha van Scheltinga; Werner Kühlbrandt
Journal:  Nature       Date:  2010-09-09       Impact factor: 49.962

10.  A biphasic pulling force acts on transmembrane helices during translocon-mediated membrane integration.

Authors:  Nurzian Ismail; Rickard Hedman; Nina Schiller; Gunnar von Heijne
Journal:  Nat Struct Mol Biol       Date:  2012-09-23       Impact factor: 15.369

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  35 in total

1.  Determination of the Oligomeric State of SecYEG Protein Secretion Channel Complex Using in Vivo Photo- and Disulfide Cross-linking.

Authors:  Zeliang Zheng; Amy Blum; Tithi Banerjee; Qianyu Wang; Virginia Dantis; Donald Oliver
Journal:  J Biol Chem       Date:  2016-01-08       Impact factor: 5.157

2.  Mechanochemistry in Translation.

Authors:  Sarah E Leininger; Karthik Narayan; Carol Deutsch; Edward P O'Brien
Journal:  Biochemistry       Date:  2019-06-11       Impact factor: 3.162

3.  Structural and functional profiling of the lateral gate of the Sec61 translocon.

Authors:  Johannes H Reithinger; Chewon Yim; Sungmin Kim; Hunsang Lee; Hyun Kim
Journal:  J Biol Chem       Date:  2014-04-21       Impact factor: 5.157

4.  Peptide Folding in Translocon-Like Pores.

Authors:  Martin B Ulmschneider; Julia Koehler Leman; Hayden Fennell; Oliver Beckstein
Journal:  J Membr Biol       Date:  2015-05-28       Impact factor: 1.843

Review 5.  The stop-and-go traffic regulating protein biogenesis: How translation kinetics controls proteostasis.

Authors:  Kevin C Stein; Judith Frydman
Journal:  J Biol Chem       Date:  2018-11-30       Impact factor: 5.157

6.  Forces on Nascent Polypeptides during Membrane Insertion and Translocation via the Sec Translocon.

Authors:  Michiel J M Niesen; Annika Müller-Lucks; Rickard Hedman; Gunnar von Heijne; Thomas F Miller
Journal:  Biophys J       Date:  2018-10-10       Impact factor: 4.033

7.  Effects of protein size, thermodynamic stability, and net charge on cotranslational folding on the ribosome.

Authors:  José Arcadio Farías-Rico; Frida Ruud Selin; Ioanna Myronidi; Marie Frühauf; Gunnar von Heijne
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-17       Impact factor: 11.205

8.  Cotranslational folding stimulates programmed ribosomal frameshifting in the alphavirus structural polyprotein.

Authors:  Haley R Harrington; Matthew H Zimmer; Laura M Chamness; Veronica Nash; Wesley D Penn; Thomas F Miller; Suchetana Mukhopadhyay; Jonathan P Schlebach
Journal:  J Biol Chem       Date:  2020-03-13       Impact factor: 5.157

9.  Membrane protein serendipity.

Authors:  Gunnar von Heijne
Journal:  J Biol Chem       Date:  2018-03-09       Impact factor: 5.157

10.  The Ribosome-Sec61 Translocon Complex Forms a Cytosolically Restricted Environment for Early Polytopic Membrane Protein Folding.

Authors:  Melissa A Patterson; Anannya Bandyopadhyay; Prasanna K Devaraneni; Josha Woodward; LeeAnn Rooney; Zhongying Yang; William R Skach
Journal:  J Biol Chem       Date:  2015-08-07       Impact factor: 5.157

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