Literature DB >> 23928723

Characterization of two naturally truncated, Ssb-like proteins from the nitrogen-fixing cyanobacterium, Anabaena sp. PCC7120.

Anurag Kirti1, Hema Rajaram, Shree Kumar Apte.   

Abstract

Single-stranded (ss) DNA-binding (Ssb) proteins are vital for all DNA metabolic processes and are characterized by an N-terminal OB-fold followed by P/G-rich spacer region and a C-terminal tail. In the genome of the heterocystous, nitrogen-fixing cyanobacterium, Anabaena sp. strain PCC 7120, two genes alr0088 and alr7579 are annotated as ssb, but the corresponding proteins have only the N-terminal OB-fold and no P/G-rich region or acidic tail, thereby rendering them unable to interact with genome maintenance proteins. Both the proteins were expressed under normal growth conditions in Anabaena PCC7120 and regulated differentially under abiotic stresses which induce DNA damage, indicating that these are functional genes. Constitutive overexpression of Alr0088 in Anabaena enhanced the tolerance to DNA-damaging stresses which caused formation of DNA adducts such as UV and MitomycinC, but significantly decreased the tolerance to γ-irradiation, which causes single- and double-stranded DNA breaks. On the other hand, overexpression of Alr7579 had no significant effect on normal growth or stress tolerance of Anabaena. Thus, of the two truncated Ssb-like proteins, Alr0088 may be involved in protection of ssDNA from damage, but due to the absence of acidic tail, it may not aid in repair of damaged DNA. These two proteins are present across cyanobacterial genera and unique to them. These initial studies pave the way to the understanding of DNA repair in cyanobacteria, which is not very well documented.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23928723     DOI: 10.1007/s11120-013-9904-4

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  24 in total

Review 1.  Nucleic acid recognition by OB-fold proteins.

Authors:  Douglas L Theobald; Rachel M Mitton-Fry; Deborah S Wuttke
Journal:  Annu Rev Biophys Biomol Struct       Date:  2003-02-18

Review 2.  OB-fold domains: a snapshot of the evolution of sequence, structure and function.

Authors:  Vickery Arcus
Journal:  Curr Opin Struct Biol       Date:  2002-12       Impact factor: 6.809

3.  Differential regulation of groESL operon expression in response to heat and light in Anabaena.

Authors:  Hema Rajaram; Shree Kumar Apte
Journal:  Arch Microbiol       Date:  2010-07-02       Impact factor: 2.552

4.  The relative rate of synthesis and levels of single-stranded DNA binding protein during induction of SOS repair in Escherichia coli.

Authors:  F W Perrino; D C Rein; A M Bobst; R R Meyer
Journal:  Mol Gen Genet       Date:  1987-10

5.  Mutant single-strand binding protein of Escherichia coli: genetic and physiological characterization.

Authors:  J Glassberg; R R Meyer; A Kornberg
Journal:  J Bacteriol       Date:  1979-10       Impact factor: 3.490

6.  Gene duplication with displacement and rearrangement: origin of the bacterial replication protein PriB from the single-stranded DNA-binding protein Ssb.

Authors:  Vladimir A Ponomarev; Kira S Makarova; L Aravind; Eugene V Koonin
Journal:  J Mol Microbiol Biotechnol       Date:  2003

7.  Characterization of exceptionally thermostable single-stranded DNA-binding proteins from Thermotoga maritima and Thermotoga neapolitana.

Authors:  Marcin Olszewski; Anna Grot; Marek Wojciechowski; Marta Nowak; Małgorzata Mickiewicz; Józef Kur
Journal:  BMC Microbiol       Date:  2010-10-15       Impact factor: 3.605

8.  Identification of amino acids stabilizing the tetramerization of the single stranded DNA binding protein from Escherichia coli.

Authors:  L Carlini; U Curth; B Kindler; C Urbanke; R D Porter
Journal:  FEBS Lett       Date:  1998-07-03       Impact factor: 4.124

9.  An integrative expression vector for strain improvement and environmental applications of the nitrogen fixing cyanobacterium, Anabaena sp. strain PCC7120.

Authors:  Akhilesh Kumar Chaurasia; Anjali Parasnis; Shree Kumar Apte
Journal:  J Microbiol Methods       Date:  2008-02-11       Impact factor: 2.363

10.  A common regulatory region shared by divergently transcribed genes of the Escherichia coli SOS system.

Authors:  J A Brandsma; D Bosch; C Backendorf; P van de Putte
Journal:  Nature       Date:  1983 Sep 15-21       Impact factor: 49.962

View more
  4 in total

1.  The SbcC and SbcD homologs of the cyanobacterium Anabaena sp. strain PCC7120 (Alr3988 and All4463) contribute independently to DNA repair.

Authors:  Sarita Pandey; Anurag Kirti; Arvind Kumar; Hema Rajaram
Journal:  Funct Integr Genomics       Date:  2018-03-09       Impact factor: 3.410

2.  Characterization of a DUF820 family protein Alr3200 of the cyanobacterium Anabaena sp. strain PCC7120.

Authors:  Prashanth S Raghavan; Gagan D Gupta; Hema Rajaram; Vinay Kumar
Journal:  J Biosci       Date:  2016-12       Impact factor: 1.826

Review 3.  Comparative Genomics of DNA Recombination and Repair in Cyanobacteria: Biotechnological Implications.

Authors:  Corinne Cassier-Chauvat; Théo Veaudor; Franck Chauvat
Journal:  Front Microbiol       Date:  2016-11-09       Impact factor: 5.640

4.  The hypothetical protein 'All4779', and not the annotated 'Alr0088' and 'Alr7579' proteins, is the major typical single-stranded DNA binding protein of the cyanobacterium, Anabaena sp. PCC7120.

Authors:  Anurag Kirti; Hema Rajaram; Shree Kumar Apte
Journal:  PLoS One       Date:  2014-04-04       Impact factor: 3.240

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.