Literature DB >> 9688537

Identification of amino acids stabilizing the tetramerization of the single stranded DNA binding protein from Escherichia coli.

L Carlini1, U Curth, B Kindler, C Urbanke, R D Porter.   

Abstract

Mutating the histidine at position 55 present at the subunit interface of the tetrameric E. coli single stranded DNA binding (SSB) protein to tyrosine or lysine leads to cells which are UV- and temperature-sensitive. The defects of both ssbH55Y (ssb-1) and ssbH55K can be overcome by increasing protein concentration, with the ssbH55K mutation producing a less stable, readily dissociating protein whose more severe replication and repair phenotypes were less easily ameliorated by protein amplification. In this study we selected and analyzed E. coli strains where the temperature sensitivity caused by the ssbH55K mutation was suppressed by spontaneous mutations that changed the glutamine at position 76 or 110 to leucine. Using guanidinium chloride denaturation monitored by sedimentation diffusion equilibrium experiments in the analytical ultracentrifuge, we demonstrate that the double mutant SSBH55KQ76L and SSBH55KQ110L proteins form more stable homotetramers as compared to the SSBH55K single mutant protein although they are less stable than wild-type SSB. Additionally, the single mutant proteins SSBQ76L and SSBQ110L form tetramers which are more resistant to guanidinium denaturation than wild-type SSB protein.

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Year:  1998        PMID: 9688537     DOI: 10.1016/s0014-5793(98)00655-3

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  6 in total

1.  Interaction with Single-stranded DNA-binding Protein Stimulates Escherichia coli Ribonuclease HI Enzymatic Activity.

Authors:  Christine Petzold; Aimee H Marceau; Katherine H Miller; Susan Marqusee; James L Keck
Journal:  J Biol Chem       Date:  2015-04-22       Impact factor: 5.157

2.  A stable tetramer is not the only oligomeric state that mitochondrial single-stranded DNA binding proteins can adopt.

Authors:  Saurabh P Singh; Vandna Kukshal; Roberto Galletto
Journal:  J Biol Chem       Date:  2019-01-07       Impact factor: 5.157

3.  Characterization of two naturally truncated, Ssb-like proteins from the nitrogen-fixing cyanobacterium, Anabaena sp. PCC7120.

Authors:  Anurag Kirti; Hema Rajaram; Shree Kumar Apte
Journal:  Photosynth Res       Date:  2013-08-09       Impact factor: 3.573

Review 4.  The mechanism of action of the SSB interactome reveals it is the first OB-fold family of genome guardians in prokaryotes.

Authors:  Piero R Bianco
Journal:  Protein Sci       Date:  2021-06-14       Impact factor: 6.993

5.  The hypothetical protein 'All4779', and not the annotated 'Alr0088' and 'Alr7579' proteins, is the major typical single-stranded DNA binding protein of the cyanobacterium, Anabaena sp. PCC7120.

Authors:  Anurag Kirti; Hema Rajaram; Shree Kumar Apte
Journal:  PLoS One       Date:  2014-04-04       Impact factor: 3.240

6.  The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers.

Authors:  Saurabh P Singh; Vandna Kukshal; Paolo De Bona; Edwin Antony; Roberto Galletto
Journal:  Nucleic Acids Res       Date:  2018-08-21       Impact factor: 16.971

  6 in total

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