Literature DB >> 27966482

Characterization of a DUF820 family protein Alr3200 of the cyanobacterium Anabaena sp. strain PCC7120.

Prashanth S Raghavan1, Gagan D Gupta, Hema Rajaram, Vinay Kumar.   

Abstract

The hypothetical protein 'Alr3200' of Anabaena sp. strain PCC7120 is highly conserved among cyanobacterial species. It is a member of the DUF820 (Domain of Unknown Function) protein family, and is predicted to have a DNase domain. Biochemical analysis revealed a Mg(II)-dependent DNase activity for Alr3200 with a specific activity of 8.62x104 Kunitz Units (KU) mg -1 protein. Circular dichroism analysis predicted Alr3200 to have approximately 40 percent beta-strands and approximately 9 percent alpha-helical structures. Anabaena PCC7120 inherently expressed Alr3200 at very low levels, and its overexpression had no significant effect on growth of Anabaena under control conditions. However, Analr3200+, the recombinant Anabaena strain overexpressing Alr3200, exhibited zero survival upon exposure to 6 kGy of gamma-radiation, which is the LD50 for wild type Anabaena PCC7120 as well as the vector control recombinant strain, AnpAM. Comparative analysis of the two recombinant Anabaena strains suggested that it is not the accumulated Alr3200 per se, but its possible interactions with the radiation-induced unidentified DNA repair proteins of Anabaena, which hampers DNA repair resulting in radiosensitivity.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27966482     DOI: 10.1007/s12038-016-9646-5

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  30 in total

1.  Protein secondary structure prediction based on position-specific scoring matrices.

Authors:  D T Jones
Journal:  J Mol Biol       Date:  1999-09-17       Impact factor: 5.469

Review 2.  DNA repair nucleases.

Authors:  T M Marti; O Fleck
Journal:  Cell Mol Life Sci       Date:  2004-02       Impact factor: 9.261

3.  Differential regulation of groESL operon expression in response to heat and light in Anabaena.

Authors:  Hema Rajaram; Shree Kumar Apte
Journal:  Arch Microbiol       Date:  2010-07-02       Impact factor: 2.552

Review 4.  The processing of double-stranded DNA breaks for recombinational repair by helicase-nuclease complexes.

Authors:  Joseph T P Yeeles; Mark S Dillingham
Journal:  DNA Repair (Amst)       Date:  2010-01-29

5.  LexA protein of cyanobacterium Anabaena sp. strain PCC7120 exhibits in vitro pH-dependent and RecA-independent autoproteolytic activity.

Authors:  Arvind Kumar; Anurag Kirti; Hema Rajaram
Journal:  Int J Biochem Cell Biol       Date:  2014-12-15       Impact factor: 5.085

6.  An integrative expression vector for strain improvement and environmental applications of the nitrogen fixing cyanobacterium, Anabaena sp. strain PCC7120.

Authors:  Akhilesh Kumar Chaurasia; Anjali Parasnis; Shree Kumar Apte
Journal:  J Microbiol Methods       Date:  2008-02-11       Impact factor: 2.363

7.  Identification of a new family of putative PD-(D/E)XK nucleases with unusual phylogenomic distribution and a new type of the active site.

Authors:  Marcin Feder; Janusz M Bujnicki
Journal:  BMC Genomics       Date:  2005-02-18       Impact factor: 3.969

8.  The Phyre2 web portal for protein modeling, prediction and analysis.

Authors:  Lawrence A Kelley; Stefans Mezulis; Christopher M Yates; Mark N Wass; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2015-05-07       Impact factor: 13.491

9.  Checkpoint-dependent phosphorylation of Exo1 modulates the DNA damage response.

Authors:  Isabelle Morin; Hien-Ping Ngo; Amanda Greenall; Mikhajlo K Zubko; Nick Morrice; David Lydall
Journal:  EMBO J       Date:  2008-08-28       Impact factor: 11.598

10.  The hypothetical protein 'All4779', and not the annotated 'Alr0088' and 'Alr7579' proteins, is the major typical single-stranded DNA binding protein of the cyanobacterium, Anabaena sp. PCC7120.

Authors:  Anurag Kirti; Hema Rajaram; Shree Kumar Apte
Journal:  PLoS One       Date:  2014-04-04       Impact factor: 3.240

View more
  1 in total

1.  The SbcC and SbcD homologs of the cyanobacterium Anabaena sp. strain PCC7120 (Alr3988 and All4463) contribute independently to DNA repair.

Authors:  Sarita Pandey; Anurag Kirti; Arvind Kumar; Hema Rajaram
Journal:  Funct Integr Genomics       Date:  2018-03-09       Impact factor: 3.410

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.