Literature DB >> 29524012

The SbcC and SbcD homologs of the cyanobacterium Anabaena sp. strain PCC7120 (Alr3988 and All4463) contribute independently to DNA repair.

Sarita Pandey1, Anurag Kirti1, Arvind Kumar1,2, Hema Rajaram3,4.   

Abstract

The ubiquitous SbcCD exonuclease complex has been shown to perform an important role in DNA repair across prokaryotes and eukaryotes. However, they have remained uncharacterized in the ancient and stress-tolerant cyanobacteria. In the cyanobacterium Anabaena sp. strain PCC7120, SbcC and SbcD homologs, defined on the basis of the presence of corresponding functional domains, are annotated as hypothetical proteins, namely Alr3988 and All4463 respectively. Unlike the presence of sbcC and sbcD genes in a bicistronic operon in most organisms, these genes were distantly placed on the chromosome in Anabaena, and found to be negatively regulated by LexA. Both the genes were found to be essential in Anabaena as the individual deletion mutants were non-viable. On the other hand, the proteins could be individually overexpressed in Anabaena with no effect on normal cell physiology. However, they contributed positively to enhance the tolerance to different DNA damage-inducing stresses, such as mitomycin C and UV- and γ-radiation. This indicated that the two proteins, at least when overexpressed, could function independently and mitigate the damage caused due to the formation of DNA adducts and single- and double-strand breaks in Anabaena. This is the first report on possible independent in vivo functioning of SbcC and SbcD homologs in any bacteria, and the first effort to functionally characterize the proteins in any cyanobacteria.

Entities:  

Keywords:  Cyanobacteria; DNA damage; DNA repair; Radioresistance; SbcC; SbcD

Mesh:

Substances:

Year:  2018        PMID: 29524012     DOI: 10.1007/s10142-018-0599-7

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  33 in total

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Authors:  J C Connelly; D R Leach
Journal:  Genes Cells       Date:  1996-03       Impact factor: 1.891

2.  Identification of sbcD mutations as cosuppressors of recBC that allow propagation of DNA palindromes in Escherichia coli K-12.

Authors:  F P Gibson; D R Leach; R G Lloyd
Journal:  J Bacteriol       Date:  1992-02       Impact factor: 3.490

3.  Differential regulation of groESL operon expression in response to heat and light in Anabaena.

Authors:  Hema Rajaram; Shree Kumar Apte
Journal:  Arch Microbiol       Date:  2010-07-02       Impact factor: 2.552

4.  LexA protein of cyanobacterium Anabaena sp. strain PCC7120 exhibits in vitro pH-dependent and RecA-independent autoproteolytic activity.

Authors:  Arvind Kumar; Anurag Kirti; Hema Rajaram
Journal:  Int J Biochem Cell Biol       Date:  2014-12-15       Impact factor: 5.085

5.  Overexpression, purification, and characterization of the SbcCD protein from Escherichia coli.

Authors:  J C Connelly; E S de Leau; E A Okely; D R Leach
Journal:  J Biol Chem       Date:  1997-08-08       Impact factor: 5.157

6.  CDD: NCBI's conserved domain database.

Authors:  Aron Marchler-Bauer; Myra K Derbyshire; Noreen R Gonzales; Shennan Lu; Farideh Chitsaz; Lewis Y Geer; Renata C Geer; Jane He; Marc Gwadz; David I Hurwitz; Christopher J Lanczycki; Fu Lu; Gabriele H Marchler; James S Song; Narmada Thanki; Zhouxi Wang; Roxanne A Yamashita; Dachuan Zhang; Chanjuan Zheng; Stephen H Bryant
Journal:  Nucleic Acids Res       Date:  2014-11-20       Impact factor: 16.971

7.  An integrative expression vector for strain improvement and environmental applications of the nitrogen fixing cyanobacterium, Anabaena sp. strain PCC7120.

Authors:  Akhilesh Kumar Chaurasia; Anjali Parasnis; Shree Kumar Apte
Journal:  J Microbiol Methods       Date:  2008-02-11       Impact factor: 2.363

8.  The sbcDC locus mediates repression of type 5 capsule production as part of the SOS response in Staphylococcus aureus.

Authors:  Zhongyi Chen; Thanh T Luong; Chia Y Lee
Journal:  J Bacteriol       Date:  2007-08-17       Impact factor: 3.490

Review 9.  Reactive oxygen species and UV-B: effect on cyanobacteria.

Authors:  Yu-Ying He; DonatP Häder
Journal:  Photochem Photobiol Sci       Date:  2002-10       Impact factor: 3.982

10.  The hypothetical protein 'All4779', and not the annotated 'Alr0088' and 'Alr7579' proteins, is the major typical single-stranded DNA binding protein of the cyanobacterium, Anabaena sp. PCC7120.

Authors:  Anurag Kirti; Hema Rajaram; Shree Kumar Apte
Journal:  PLoS One       Date:  2014-04-04       Impact factor: 3.240

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