Literature DB >> 23911553

Development of a HIPAA-compliant environment for translational research data and analytics.

Wayne Bradford1, John F Hurdle, Bernie LaSalle, Julio C Facelli.   

Abstract

High-performance computing centers (HPC) traditionally have far less restrictive privacy management policies than those encountered in healthcare. We show how an HPC can be re-engineered to accommodate clinical data while retaining its utility in computationally intensive tasks such as data mining, machine learning, and statistics. We also discuss deploying protected virtual machines. A critical planning step was to engage the university's information security operations and the information security and privacy office. Access to the environment requires a double authentication mechanism. The first level of authentication requires access to the university's virtual private network and the second requires that the users be listed in the HPC network information service directory. The physical hardware resides in a data center with controlled room access. All employees of the HPC and its users take the university's local Health Insurance Portability and Accountability Act training series. In the first 3 years, researcher count has increased from 6 to 58.

Entities:  

Keywords:  Clinical Research Informatics; HIPAA; High-performance Computing; Translational Medical Research

Mesh:

Year:  2013        PMID: 23911553      PMCID: PMC3912719          DOI: 10.1136/amiajnl-2013-001769

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  9 in total

1.  Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.

Authors:  A R Aronson
Journal:  Proc AMIA Symp       Date:  2001

Review 2.  The Health Insurance Portability and Accountability Act Privacy Rule: a practical guide for researchers.

Authors:  Patrick P Gunn; Allen M Fremont; Melissa Bottrell; Lisa R Shugarman; Jolene Galegher; Tora Bikson
Journal:  Med Care       Date:  2004-04       Impact factor: 2.983

3.  iDASH: integrating data for analysis, anonymization, and sharing.

Authors:  Lucila Ohno-Machado; Vineet Bafna; Aziz A Boxwala; Brian E Chapman; Wendy W Chapman; Kamalika Chaudhuri; Michele E Day; Claudiu Farcas; Nathaniel D Heintzman; Xiaoqian Jiang; Hyeoneui Kim; Jihoon Kim; Michael E Matheny; Frederic S Resnic; Staal A Vinterbo
Journal:  J Am Med Inform Assoc       Date:  2011-11-10       Impact factor: 4.497

4.  Automated extraction of ejection fraction for quality measurement using regular expressions in Unstructured Information Management Architecture (UIMA) for heart failure.

Authors:  Jennifer H Garvin; Scott L DuVall; Brett R South; Bruce E Bray; Daniel Bolton; Julia Heavirland; Steve Pickard; Paul Heidenreich; Shuying Shen; Charlene Weir; Matthew Samore; Mary K Goldstein
Journal:  J Am Med Inform Assoc       Date:  2012-03-21       Impact factor: 4.497

Review 5.  Data clustering in life sciences.

Authors:  Ying Zhao; George Karypis
Journal:  Mol Biotechnol       Date:  2005-09       Impact factor: 2.695

6.  Perspectives for medical informatics. Reusing the electronic medical record for clinical research.

Authors:  H U Prokosch; T Ganslandt
Journal:  Methods Inf Med       Date:  2009       Impact factor: 2.176

7.  The HIPAA privacy rule: practical advice for academic and research institutions.

Authors:  Kim P Gunter
Journal:  Healthc Financ Manage       Date:  2002-02

8.  The clinical research data repository of the US National Institutes of Health.

Authors:  James J Cimino; Elaine J Ayres
Journal:  Stud Health Technol Inform       Date:  2010

9.  Sharing clinical research data in the United States under the Health Insurance Portability and Accountability Act and the Privacy Rule.

Authors:  James D Miller
Journal:  Trials       Date:  2010-11-19       Impact factor: 2.279

  9 in total
  11 in total

1.  Data governance requirements for distributed clinical research networks: triangulating perspectives of diverse stakeholders.

Authors:  Katherine K Kim; Dennis K Browe; Holly C Logan; Roberta Holm; Lori Hack; Lucila Ohno-Machado
Journal:  J Am Med Inform Assoc       Date:  2013-12-03       Impact factor: 4.497

2.  Design and Implementation of a Secure Computing Environment for Analysis of Sensitive Data at an Academic Medical Center.

Authors:  Peter R Oxley; John Ruffing; Thomas R Campion; Terrie R Wheeler; Curtis L Cole
Journal:  AMIA Annu Symp Proc       Date:  2018-12-05

3.  Understanding enterprise data warehouses to support clinical and translational research.

Authors:  Thomas R Campion; Catherine K Craven; David A Dorr; Boyd M Knosp
Journal:  J Am Med Inform Assoc       Date:  2020-07-01       Impact factor: 7.942

4.  MAV-clic: management, analysis, and visualization of clinical data.

Authors:  Zeeshan Ahmed; Minjung Kim; Bruce T Liang
Journal:  JAMIA Open       Date:  2018-12-29

5.  Using supervised machine learning classifiers to estimate likelihood of participating in clinical trials of a de-identified version of ResearchMatch.

Authors:  Janette Vazquez; Samir Abdelrahman; Loretta M Byrne; Michael Russell; Paul Harris; Julio C Facelli
Journal:  J Clin Transl Sci       Date:  2020-09-04

6.  MLBCD: a machine learning tool for big clinical data.

Authors:  Gang Luo
Journal:  Health Inf Sci Syst       Date:  2015-09-28

7.  PredicT-ML: a tool for automating machine learning model building with big clinical data.

Authors:  Gang Luo
Journal:  Health Inf Sci Syst       Date:  2016-06-08

8.  Predicting Appropriate Admission of Bronchiolitis Patients in the Emergency Department: Rationale and Methods.

Authors:  Gang Luo; Bryan L Stone; Michael D Johnson; Flory L Nkoy
Journal:  JMIR Res Protoc       Date:  2016-03-07

9.  Using Computational Approaches to Improve Risk-Stratified Patient Management: Rationale and Methods.

Authors:  Gang Luo; Bryan L Stone; Farrant Sakaguchi; Xiaoming Sheng; Maureen A Murtaugh
Journal:  JMIR Res Protoc       Date:  2015-10-26

10.  Practicing precision medicine with intelligently integrative clinical and multi-omics data analysis.

Authors:  Zeeshan Ahmed
Journal:  Hum Genomics       Date:  2020-10-02       Impact factor: 4.639

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