Literature DB >> 23906193

Spectroscopic and computational characterization of the NO adduct of substrate-bound Fe(II) cysteine dioxygenase: insights into the mechanism of O2 activation.

Elizabeth J Blaesi1, Jessica D Gardner, Brian G Fox, Thomas C Brunold.   

Abstract

Cysteine dioxygenase (CDO) is a mononuclear nonheme iron(II)-dependent enzyme critical for maintaining appropriate cysteine (Cys) and taurine levels in eukaryotic systems. Because CDO possesses both an unusual 3-His facial ligation sphere to the iron center and a rare Cys-Tyr cross-link near the active site, the mechanism by which it converts Cys and molecular oxygen to cysteine sulfinic acid is of broad interest. However, as of yet, direct experimental support for any of the proposed mechanisms is still lacking. In this study, we have used NO as a substrate analogue for O2 to prepare a species that mimics the geometric and electronic structures of an early reaction intermediate. The resultant unusual S = (1)/2 {FeNO}(7) species was characterized by magnetic circular dichroism, electron paramagnetic resonance, and electronic absorption spectroscopies as well as computational methods including density functional theory and semiempirical calculations. The NO adducts of Cys- and selenocysteine (Sec)-bound Fe(II)CDO exhibit virtually identical electronic properties; yet, CDO is unable to oxidize Sec. To explore the differences in reactivity between Cys- and Sec-bound CDO, the geometries and energies of viable O2-bound intermediates were evaluated computationally, and it was found that a low-energy quintet-spin intermediate on the Cys reaction pathway adopts a different geometry for the Sec-bound adduct. The absence of a low-energy O2 adduct for Sec-bound CDO is consistent with our experimental data and may explain why Sec is not oxidized by CDO.

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Year:  2013        PMID: 23906193      PMCID: PMC3974268          DOI: 10.1021/bi400825c

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  48 in total

1.  Correlating crosslink formation with enzymatic activity in cysteine dioxygenase.

Authors:  Eleni Siakkou; Malcolm T Rutledge; Sigurd M Wilbanks; Guy N L Jameson
Journal:  Biochim Biophys Acta       Date:  2011-08-03

2.  Cysteine dioxygenase.

Authors:  K Yamaguchi; Y Hosokawa
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

3.  Cu(I)-dependent biogenesis of the galactose oxidase redox cofactor.

Authors:  Mei M Whittaker; James W Whittaker
Journal:  J Biol Chem       Date:  2003-04-01       Impact factor: 5.157

Review 4.  The 2-His-1-carboxylate facial triad: a versatile platform for dioxygen activation by mononuclear non-heme iron(II) enzymes.

Authors:  Kevin D Koehntop; Joseph P Emerson; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2005-03-01       Impact factor: 3.358

5.  Siroheme- and [Fe4-S4]-dependent NirA from Mycobacterium tuberculosis is a sulfite reductase with a covalent Cys-Tyr bond in the active site.

Authors:  Robert Schnell; Tatyana Sandalova; Ulf Hellman; Ylva Lindqvist; Gunter Schneider
Journal:  J Biol Chem       Date:  2005-05-24       Impact factor: 5.157

6.  The reduction potential of nitric oxide (NO) and its importance to NO biochemistry.

Authors:  Michael D Bartberger; Wei Liu; Eleonora Ford; Katrina M Miranda; Christopher Switzer; Jon M Fukuto; Patrick J Farmer; David A Wink; Kendall N Houk
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-12       Impact factor: 11.205

7.  Iron nitrosyls of a pentadentate ligand containing a single carboxamide group: syntheses, structures, electronic properties, and photolability of NO.

Authors:  Apurba K Patra; John M Rowland; Dana S Marlin; Eckhard Bill; Marilyn M Olmstead; Pradip K Mascharak
Journal:  Inorg Chem       Date:  2003-10-20       Impact factor: 5.165

8.  Structural, spectroscopic, and computational study of an octahedral, non-heme [Fe-NO](6-8) Series: [Fe(NO)(cyclam-ac)]2+/+/0.

Authors:  Ricardo García Serres; Craig A Grapperhaus; Eberhard Bothe; Eckhard Bill; Thomas Weyhermüller; Frank Neese; Karl Wieghardt
Journal:  J Am Chem Soc       Date:  2004-04-28       Impact factor: 15.419

Review 9.  Sulfur amino acid metabolism: pathways for production and removal of homocysteine and cysteine.

Authors:  Martha H Stipanuk
Journal:  Annu Rev Nutr       Date:  2004       Impact factor: 11.848

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Journal:  J Am Chem Soc       Date:  2007-05-17       Impact factor: 15.419

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  16 in total

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Journal:  Biochemistry       Date:  2015-12-17       Impact factor: 3.162

Review 2.  Mono- and binuclear non-heme iron chemistry from a theoretical perspective.

Authors:  Tibor András Rokob; Jakub Chalupský; Daniel Bím; Prokopis C Andrikopoulos; Martin Srnec; Lubomír Rulíšek
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4.  Spectroscopic and Computational Investigation of the H155A Variant of Cysteine Dioxygenase: Geometric and Electronic Consequences of a Third-Sphere Amino Acid Substitution.

Authors:  Elizabeth J Blaesi; Brian G Fox; Thomas C Brunold
Journal:  Biochemistry       Date:  2015-05-01       Impact factor: 3.162

5.  Mechanism-based inhibition of human persulfide dioxygenase by γ-glutamyl-homocysteinyl-glycine.

Authors:  Omer Kabil; Nicole Motl; Martin Strack; Javier Seravalli; Nils Metzler-Nolte; Ruma Banerjee
Journal:  J Biol Chem       Date:  2018-07-06       Impact factor: 5.157

Review 6.  Go it alone: four-electron oxidations by mononuclear non-heme iron enzymes.

Authors:  Spencer C Peck; Wilfred A van der Donk
Journal:  J Biol Inorg Chem       Date:  2016-10-25       Impact factor: 3.358

7.  Synthesis, X-ray Structures, Electronic Properties, and O2/NO Reactivities of Thiol Dioxygenase Active-Site Models.

Authors:  Anne A Fischer; Nuru Stracey; Sergey V Lindeman; Thomas C Brunold; Adam T Fiedler
Journal:  Inorg Chem       Date:  2016-11-01       Impact factor: 5.165

8.  Spectroscopic and Computational Comparisons of Thiolate-Ligated Ferric Nonheme Complexes to Cysteine Dioxygenase: Second-Sphere Effects on Substrate (Analogue) Positioning.

Authors:  Anne A Fischer; Joshua R Miller; Richard J Jodts; Danushka M Ekanayake; Sergey V Lindeman; Thomas C Brunold; Adam T Fiedler
Journal:  Inorg Chem       Date:  2019-12-02       Impact factor: 5.165

9.  Formation of a Reactive, Alkyl Thiolate-Ligated FeIII-Superoxo Intermediate Derived from Dioxygen.

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Journal:  J Am Chem Soc       Date:  2019-01-24       Impact factor: 15.419

10.  Spectroscopic and Electronic Structure Study of ETHE1: Elucidating the Factors Influencing Sulfur Oxidation and Oxygenation in Mononuclear Nonheme Iron Enzymes.

Authors:  Serra Goudarzi; Jeffrey T Babicz; Omer Kabil; Ruma Banerjee; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2018-10-26       Impact factor: 15.419

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