Literature DB >> 23898358

High throughput fabrication of disposable nanofluidic lab-on-chip devices for single molecule studies.

Jeroen A van Kan1, Ce Zhang, Piravi Perumal Malar, Johan R C van der Maarel.   

Abstract

An easy method is introduced allowing fast polydimethylsiloxane (PDMS) replication of nanofluidic lab-on-chip devices using accurately fabricated molds featuring cross-sections down to 60 nm. A high quality master is obtained through proton beam writing and UV lithography. This master can be used more than 200 times to replicate nanofluidic devices capable of handling single DNA molecules. This method allows to fabricate nanofluidic devices through simple PDMS casting. The extensions of YOYO-1 stained bacteriophage T4 and λ-DNA inside these nanochannels have been investigated using fluorescence microscopy and follow the scaling prediction of a large, locally coiled polymer chain confined in nanochannels.

Entities:  

Year:  2012        PMID: 23898358      PMCID: PMC3423307          DOI: 10.1063/1.4740231

Source DB:  PubMed          Journal:  Biomicrofluidics        ISSN: 1932-1058            Impact factor:   2.800


  26 in total

1.  Separation of long DNA molecules in a microfabricated entropic trap array.

Authors:  J Han; H G Craighead
Journal:  Science       Date:  2000-05-12       Impact factor: 47.728

2.  Rapid prototyping of nanofluidic systems using size-reduced electrospun nanofibers for biomolecular analysis.

Authors:  Seung-Min Park; Yun Suk Huh; Kylan Szeto; Daniel J Joe; Jun Kameoka; Geoffrey W Coates; Joshua B Edel; David Erickson; Harold G Craighead
Journal:  Small       Date:  2010-11-05       Impact factor: 13.281

Review 3.  Future lab-on-a-chip technologies for interrogating individual molecules.

Authors:  Harold Craighead
Journal:  Nature       Date:  2006-07-27       Impact factor: 49.962

4.  Concentration polarization and nonlinear electrokinetic flow near a nanofluidic channel.

Authors:  Sung Jae Kim; Ying-Chih Wang; Jeong Hoon Lee; Hongchul Jang; Jongyoon Han
Journal:  Phys Rev Lett       Date:  2007-07-25       Impact factor: 9.161

5.  Nanofluidic devices and their applications.

Authors:  Patrick Abgrall; Nam Trung Nguyen
Journal:  Anal Chem       Date:  2008-03-06       Impact factor: 6.986

6.  Tuneable elastomeric nanochannels for nanofluidic manipulation.

Authors:  Dongeun Huh; K L Mills; Xiaoyue Zhu; Mark A Burns; M D Thouless; Shuichi Takayama
Journal:  Nat Mater       Date:  2007-05-07       Impact factor: 43.841

7.  Stretching DNA in polymer nanochannels fabricated by thermal imprint in PMMA.

Authors:  Lasse H Thamdrup; Anna Klukowska; Anders Kristensen
Journal:  Nanotechnology       Date:  2008-02-20       Impact factor: 3.874

8.  Ionic effects on the equilibrium dynamics of DNA confined in nanoslits.

Authors:  Chih-Chen Hsieh; Anthony Balducci; Patrick S Doyle
Journal:  Nano Lett       Date:  2008-05-07       Impact factor: 11.189

9.  Fast DNA sequencing with a graphene-based nanochannel device.

Authors:  Seung Kyu Min; Woo Youn Kim; Yeonchoo Cho; Kwang S Kim
Journal:  Nat Nanotechnol       Date:  2011-02-06       Impact factor: 39.213

10.  A method for nanofluidic device prototyping using elastomeric collapse.

Authors:  Seung-min Park; Yun Suk Huh; Harold G Craighead; David Erickson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-27       Impact factor: 11.205

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  8 in total

1.  Fabrication of two dimensional polyethylene terephthalate nanofluidic chip using hot embossing and thermal bonding technique.

Authors:  Zhifu Yin; E Cheng; Helin Zou; Li Chen; Shenbo Xu
Journal:  Biomicrofluidics       Date:  2014-11-25       Impact factor: 2.800

2.  Effects of Hfq on the conformation and compaction of DNA.

Authors:  Kai Jiang; Ce Zhang; Durgarao Guttula; Fan Liu; Jeroen A van Kan; Christophe Lavelle; Krzysztof Kubiak; Antoine Malabirade; Alain Lapp; Véronique Arluison; Johan R C van der Maarel
Journal:  Nucleic Acids Res       Date:  2015-03-30       Impact factor: 16.971

3.  Internal Motion of Chromatin Fibers Is Governed by Dynamics of Uncompressed Linker Strands.

Authors:  Rajib Basak; William Rosencrans; Indresh Yadav; Peiyan Yan; Nikolay V Berezhnoy; Qinming Chen; Jeroen A van Kan; Lars Nordenskiöld; Anatoly Zinchenko; Johan R C van der Maarel
Journal:  Biophys J       Date:  2020-10-27       Impact factor: 4.033

4.  Evaluation of Blob Theory for the Diffusion of DNA in Nanochannels.

Authors:  Damini Gupta; Aditya Bikram Bhandari; Kevin D Dorfman
Journal:  Macromolecules       Date:  2018-02-20       Impact factor: 5.985

5.  Compaction and condensation of DNA mediated by the C-terminal domain of Hfq.

Authors:  Antoine Malabirade; Kai Jiang; Krzysztof Kubiak; Alvaro Diaz-Mendoza; Fan Liu; Jeroen A van Kan; Jean-François Berret; Véronique Arluison; Johan R C van der Maarel
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

6.  Low auto-fluorescence fabrication methods for plastic nanoslits.

Authors:  Zhifu Yin; Liping Qi; Helin Zou; Lei Sun; Shenbo Xu
Journal:  IET Nanobiotechnol       Date:  2016-04       Impact factor: 1.847

7.  Amplified stretch of bottlebrush-coated DNA in nanofluidic channels.

Authors:  Ce Zhang; Armando Hernandez-Garcia; Kai Jiang; Zongying Gong; Durgarao Guttula; Siow Yee Ng; Piravi P Malar; Jeroen A van Kan; Liang Dai; Patrick S Doyle; Renko de Vries; Johan R C van der Maarel
Journal:  Nucleic Acids Res       Date:  2013-09-03       Impact factor: 16.971

8.  A novel 2D silicon nano-mold fabrication technique for linear nanochannels over a 4 inch diameter substrate.

Authors:  Zhifu Yin; Liping Qi; Helin Zou; Lei Sun
Journal:  Sci Rep       Date:  2016-01-11       Impact factor: 4.379

  8 in total

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