Literature DB >> 23897514

n→π* interactions in poly(lactic acid) suggest a role in protein folding.

Robert W Newberry1, Ronald T Raines.   

Abstract

Poly(lactic acid) (PLA) is a versatile synthetic polyester. We noted that this depsipeptide analog of polyalanine has a helical structure that resembles a polyproline II helix. Using natural bond orbital analysis, we find that n→π* interactions between sequential ester carbonyl groups contribute 0.44 kcal mol(-1) per monomer to the conformational stability of PLA helices. We conclude that analogous n→π* interactions could direct the folding of a polypeptide chain into a polyproline II helix prior to the formation of hydrogen bonds between backbone amides.

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Year:  2013        PMID: 23897514      PMCID: PMC3839959          DOI: 10.1039/c3cc44317e

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  25 in total

1.  An investigation into the origin of the dramatically reduced reactivity of peptide-prolyl-thioesters in native chemical ligation.

Authors:  Samuel B Pollock; Stephen B H Kent
Journal:  Chem Commun (Camb)       Date:  2010-12-21       Impact factor: 6.222

Review 2.  An evaluation of peptide-bond isosteres.

Authors:  Amit Choudhary; Ronald T Raines
Journal:  Chembiochem       Date:  2011-07-12       Impact factor: 3.164

3.  Signature of n→π* interactions in α-helices.

Authors:  Amit Choudhary; Ronald T Raines
Journal:  Protein Sci       Date:  2011-04-26       Impact factor: 6.725

4.  Urea promotes polyproline II helix formation: implications for protein denatured states.

Authors:  Shelly J Whittington; Brian W Chellgren; Veronique M Hermann; Trevor P Creamer
Journal:  Biochemistry       Date:  2005-04-26       Impact factor: 3.162

5.  Quantum mechanical origin of the conformational preferences of 4-thiaproline and its S-oxides.

Authors:  Amit Choudhary; Khian Hong Pua; Ronald T Raines
Journal:  Amino Acids       Date:  2010-03-12       Impact factor: 3.520

6.  An n→π* interaction in aspirin: implications for structure and reactivity.

Authors:  Amit Choudhary; Kimberli J Kamer; Ronald T Raines
Journal:  J Org Chem       Date:  2011-09-06       Impact factor: 4.354

7.  A stereoelectronic effect in prebiotic nucleotide synthesis.

Authors:  Amit Choudhary; Kimberli J Kamer; Matthew W Powner; John D Sutherland; Ronald T Raines
Journal:  ACS Chem Biol       Date:  2010-07-16       Impact factor: 5.100

8.  Amide-to-E-olefin versus amide-to-ester backbone H-bond perturbations: Evaluating the O-O repulsion for extracting H-bond energies.

Authors:  Yanwen Fu; Jianmin Gao; Jan Bieschke; Maria A Dendle; Jeffery W Kelly
Journal:  J Am Chem Soc       Date:  2006-12-20       Impact factor: 15.419

Review 9.  Collagen structure and stability.

Authors:  Matthew D Shoulders; Ronald T Raines
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

10.  Nature of amide carbonyl--carbonyl interactions in proteins.

Authors:  Amit Choudhary; Deepa Gandla; Grant R Krow; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2009-06-03       Impact factor: 15.419

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  8 in total

1.  n→π* Interactions Modulate the Disulfide Reduction Potential of Epidithiodiketopiperazines.

Authors:  Henry R Kilgore; Chase R Olsson; Kyan A D'Angelo; Mohammad Movassaghi; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2020-08-21       Impact factor: 15.419

2.  A key n→π* Interaction in N-acyl homoserine lactones.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  ACS Chem Biol       Date:  2014-02-26       Impact factor: 5.100

3.  n→π* interactions engender chirality in carbonyl groups.

Authors:  Amit Choudhary; Robert W Newberry; Ronald T Raines
Journal:  Org Lett       Date:  2014-06-13       Impact factor: 6.005

4.  The n→π* Interaction.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  Acc Chem Res       Date:  2017-07-23       Impact factor: 22.384

5.  Relative orientation of the carbonyl groups determines the nature of orbital interactions in carbonyl-carbonyl short contacts.

Authors:  Biswajit Sahariah; Bani Kanta Sarma
Journal:  Chem Sci       Date:  2018-10-29       Impact factor: 9.825

Review 6.  Fluorescence in "Nonfluorescent" Polymers.

Authors:  Dhruba P Chatterjee; Mahuya Pakhira; Arun K Nandi
Journal:  ACS Omega       Date:  2020-11-25

7.  Crystal structure of N-(3-oxo-butano-yl)-l-homoserine lactone.

Authors:  R W Newberry; R T Raines
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2016-01-09

8.  Reciprocal carbonyl-carbonyl interactions in small molecules and proteins.

Authors:  Abdur Rahim; Pinaki Saha; Kunal Kumar Jha; Nagamani Sukumar; Bani Kanta Sarma
Journal:  Nat Commun       Date:  2017-07-19       Impact factor: 14.919

  8 in total

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