Literature DB >> 24556113

A key n→π* Interaction in N-acyl homoserine lactones.

Robert W Newberry1, Ronald T Raines.   

Abstract

Many Gram-negative bacteria employ N-acyl homoserine lactones (AHLs) as signal molecules for quorum sensing. The binding of AHLs to their target LuxR-type receptor proteins can effect changes in growth, virulence, and other phenotypes. LuxR-type receptors therefore present attractive pharmaceutical targets for control of bacterial pathogenesis. Here, we present X-ray crystallographic and computational evidence that the conformation of free AHLs is biased away from the conformation observed when bound to their cognate receptor due to the influence of an n→π* interaction. In this n→π* interaction, the p-type lone pair (n) of the N-acyl oxygen overlaps with the π* orbital of the lactone carbonyl group. This overlap results in the release of approximately 0.64 kcal/mol of energy. We also show that this interaction can be attenuated by installing electron-withdrawing groups on the N-acyl chain. Modulating this previously unappreciated interaction could present a new avenue toward effective inhibitors of bacterial quorum sensing.

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Year:  2014        PMID: 24556113      PMCID: PMC4219647          DOI: 10.1021/cb500022u

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  38 in total

1.  The Protein Data Bank.

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Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Quorum sensing: cell-to-cell communication in bacteria.

Authors:  Christopher M Waters; Bonnie L Bassler
Journal:  Annu Rev Cell Dev Biol       Date:  2005       Impact factor: 13.827

3.  Importance of ring puckering versus interstrand hydrogen bonds for the conformational stability of collagen.

Authors:  Roman S Erdmann; Helma Wennemers
Journal:  Angew Chem Int Ed Engl       Date:  2011-06-08       Impact factor: 15.336

4.  Interplay of hydrogen bonds and n→π* interactions in proteins.

Authors:  Gail J Bartlett; Robert W Newberry; Brett VanVeller; Ronald T Raines; Derek N Woolfson
Journal:  J Am Chem Soc       Date:  2013-12-03       Impact factor: 15.419

5.  A stereoelectronic effect in prebiotic nucleotide synthesis.

Authors:  Amit Choudhary; Kimberli J Kamer; Matthew W Powner; John D Sutherland; Ronald T Raines
Journal:  ACS Chem Biol       Date:  2010-07-16       Impact factor: 5.100

6.  The "azido gauche effect"-implications for the conformation of azidoprolines.

Authors:  Louis-Sebastian Sonntag; Sabine Schweizer; Christian Ochsenfeld; Helma Wennemers
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

7.  Stereoelectronic effects on the transition barrier of polyproline conformational interconversion.

Authors:  Yi-Chun Chiang; Yu-Ju Lin; Jia-Cherng Horng
Journal:  Protein Sci       Date:  2009-09       Impact factor: 6.725

8.  N-acylhomoserine lactones undergo lactonolysis in a pH-, temperature-, and acyl chain length-dependent manner during growth of Yersinia pseudotuberculosis and Pseudomonas aeruginosa.

Authors:  Edwin A Yates; Bodo Philipp; Catherine Buckley; Steve Atkinson; Siri Ram Chhabra; R Elizabeth Sockett; Morris Goldner; Yves Dessaux; Miguel Cámara; Harry Smith; Paul Williams
Journal:  Infect Immun       Date:  2002-10       Impact factor: 3.441

9.  Cis-trans amide bond rotamers in β-peptoids and peptoids: evaluation of stereoelectronic effects in backbone and side chains.

Authors:  Jonas S Laursen; Jens Engel-Andreasen; Peter Fristrup; Pernille Harris; Christian A Olsen
Journal:  J Am Chem Soc       Date:  2013-02-07       Impact factor: 15.419

10.  Nature of amide carbonyl--carbonyl interactions in proteins.

Authors:  Amit Choudhary; Deepa Gandla; Grant R Krow; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2009-06-03       Impact factor: 15.419

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  10 in total

1.  n→π* Interactions Are Competitive with Hydrogen Bonds.

Authors:  Robert W Newberry; Samuel J Orke; Ronald T Raines
Journal:  Org Lett       Date:  2016-07-13       Impact factor: 6.005

2.  n→π* Interactions Modulate the Disulfide Reduction Potential of Epidithiodiketopiperazines.

Authors:  Henry R Kilgore; Chase R Olsson; Kyan A D'Angelo; Mohammad Movassaghi; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2020-08-21       Impact factor: 15.419

3.  Attractive Interactions between Heteroallenes and the Cucurbituril Portal.

Authors:  Ofer Reany; Amanda Li; Maayan Yefet; Michael K Gilson; Ehud Keinan
Journal:  J Am Chem Soc       Date:  2017-06-07       Impact factor: 15.419

4.  n→π* interactions engender chirality in carbonyl groups.

Authors:  Amit Choudhary; Robert W Newberry; Ronald T Raines
Journal:  Org Lett       Date:  2014-06-13       Impact factor: 6.005

5.  Synthesis and biological evaluation of novel N-α-haloacylated homoserine lactones as quorum sensing modulators.

Authors:  Michail Syrpas; Ewout Ruysbergh; Christian V Stevens; Norbert De Kimpe; Sven Mangelinckx
Journal:  Beilstein J Org Chem       Date:  2014-10-30       Impact factor: 2.883

6.  The n→π* Interaction.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  Acc Chem Res       Date:  2017-07-23       Impact factor: 22.384

7.  Stereodivergent, Diels-Alder-initiated organocascades employing α,β-unsaturated acylammonium salts: scope, mechanism, and application.

Authors:  Mikail E Abbasov; Brandi M Hudson; Dean J Tantillo; Daniel Romo
Journal:  Chem Sci       Date:  2016-10-21       Impact factor: 9.825

8.  Relative orientation of the carbonyl groups determines the nature of orbital interactions in carbonyl-carbonyl short contacts.

Authors:  Biswajit Sahariah; Bani Kanta Sarma
Journal:  Chem Sci       Date:  2018-10-29       Impact factor: 9.825

9.  Crystal structure of N-(3-oxo-butano-yl)-l-homoserine lactone.

Authors:  R W Newberry; R T Raines
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2016-01-09

10.  Reciprocal carbonyl-carbonyl interactions in small molecules and proteins.

Authors:  Abdur Rahim; Pinaki Saha; Kunal Kumar Jha; Nagamani Sukumar; Bani Kanta Sarma
Journal:  Nat Commun       Date:  2017-07-19       Impact factor: 14.919

  10 in total

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