Literature DB >> 23868376

Protein structure in context: the molecular landscape of angiogenesis.

Elise A Span1, David S Goodsell, Ramani Ramchandran, Margaret A Franzen, Tim Herman, Daniel S Sem.   

Abstract

A team of students, educators, and researchers has developed new materials to teach cell signaling within its cellular context. Two nontraditional modalities are employed: physical models, to explore the atomic details of several of the proteins in the angiogenesis signaling cascade, and illustrations of the proteins in their cellular environment, to give an intuitive understanding of the cellular context of the pathway. The experiences of the team underscore the use of these types of materials as an effective mode for fostering students' understanding of the molecular world and the scientific method used to define it.
Copyright © 2013 Wiley Periodicals, Inc.

Entities:  

Keywords:  VEGF signaling; angiogenesis; protein structure; visual learning

Mesh:

Substances:

Year:  2013        PMID: 23868376      PMCID: PMC4074543          DOI: 10.1002/bmb.20706

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.160


  10 in total

Review 1.  The molecular perspective: cadherin.

Authors:  David S Goodsell
Journal:  Oncologist       Date:  2002

2.  A combination of hand-held models and computer imaging programs helps students answer oral questions about molecular structure and function: a controlled investigation of student learning.

Authors:  Michelle A Harris; Ronald F Peck; Shannon Colton; Jennifer Morris; Elias Chaibub Neto; Julie Kallio
Journal:  CBE Life Sci Educ       Date:  2009       Impact factor: 3.325

Review 3.  Inside a living cell.

Authors:  D S Goodsell
Journal:  Trends Biochem Sci       Date:  1991-06       Impact factor: 13.807

4.  The minds' eye: Biomedical visualization: The most powerful tool in science.

Authors:  Linda S Nye
Journal:  Biochem Mol Biol Educ       Date:  2004-03       Impact factor: 1.160

5.  Tactile teaching: Exploring protein structure/function using physical models*.

Authors:  Tim Herman; Jennifer Morris; Shannon Colton; Ann Batiza; Michael Patrick; Margaret Franzen; David S Goodsell
Journal:  Biochem Mol Biol Educ       Date:  2006-07       Impact factor: 1.160

6.  Physical models enhance molecular three-dimensional literacy in an introductory biochemistry course*.

Authors:  Jacqueline R Roberts; Eric Hagedorn; Paul Dillenburg; Michael Patrick; Timothy Herman
Journal:  Biochem Mol Biol Educ       Date:  2005-03       Impact factor: 1.160

7.  Miniseries: Illustrating the machinery of life: Eukaryotic cell panorama.

Authors:  David S Goodsell
Journal:  Biochem Mol Biol Educ       Date:  2011 Mar-Apr       Impact factor: 1.160

8.  Escherichia coli.

Authors:  David S Goodsell
Journal:  Biochem Mol Biol Educ       Date:  2009-11       Impact factor: 1.160

9.  Putting proteins in context: scientific illustrations bring together information from diverse sources to provide an integrative view of the molecular biology of cells.

Authors:  David S Goodsell
Journal:  Bioessays       Date:  2012-07-16       Impact factor: 4.345

Review 10.  The role of adherens junctions and VE-cadherin in the control of vascular permeability.

Authors:  Elisabetta Dejana; Fabrizio Orsenigo; Maria Grazia Lampugnani
Journal:  J Cell Sci       Date:  2008-07-01       Impact factor: 5.285

  10 in total
  3 in total

Review 1.  From Atoms to Cells: Using Mesoscale Landscapes to Construct Visual Narratives.

Authors:  David S Goodsell; Margaret A Franzen; Tim Herman
Journal:  J Mol Biol       Date:  2018-06-07       Impact factor: 5.469

Review 2.  Protein Neighbors and Proximity Proteomics.

Authors:  Johanna S Rees; Xue-Wen Li; Sarah Perrett; Kathryn S Lilley; Antony P Jackson
Journal:  Mol Cell Proteomics       Date:  2015-09-08       Impact factor: 5.911

Review 3.  Magnetism of materials: theory and practice in magnetic resonance imaging.

Authors:  Michele Gaeta; Marco Cavallaro; Sergio Lucio Vinci; Enricomaria Mormina; Alfredo Blandino; Maria Adele Marino; Francesca Granata; Agostino Tessitore; Karol Galletta; Tommaso D'Angelo; Carmela Visalli
Journal:  Insights Imaging       Date:  2021-12-04
  3 in total

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