Literature DB >> 21445900

Miniseries: Illustrating the machinery of life: Eukaryotic cell panorama.

David S Goodsell1.   

Abstract

Diverse biological data may be used to create illustrations of molecules in their cellular context. This report describes the scientific results that support an illustration of a eukaryotic cell, enlarged by one million times to show the distribution and arrangement of macromolecules. The panoramic cross section includes eight panels that extend from the nucleus to the cell surface, showing the process of protein synthesis and export. Results from biochemistry, electron microscopy, NMR spectroscopy and x-ray crystallography were used to create the image.
Copyright © 2011 Wiley Periodicals, Inc.

Mesh:

Year:  2011        PMID: 21445900     DOI: 10.1002/bmb.20494

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.160


  12 in total

Review 1.  From Atoms to Cells: Using Mesoscale Landscapes to Construct Visual Narratives.

Authors:  David S Goodsell; Margaret A Franzen; Tim Herman
Journal:  J Mol Biol       Date:  2018-06-07       Impact factor: 5.469

2.  More than meets the eye. Modern experimental techniques require increasingly sophisticated approaches to data visualization.

Authors:  Andrea Rinaldi
Journal:  EMBO Rep       Date:  2012-09-18       Impact factor: 8.807

3.  Putting proteins in context: scientific illustrations bring together information from diverse sources to provide an integrative view of the molecular biology of cells.

Authors:  David S Goodsell
Journal:  Bioessays       Date:  2012-07-16       Impact factor: 4.345

Review 4.  Absence of a simple code: how transcription factors read the genome.

Authors:  Matthew Slattery; Tianyin Zhou; Lin Yang; Ana Carolina Dantas Machado; Raluca Gordân; Remo Rohs
Journal:  Trends Biochem Sci       Date:  2014-08-14       Impact factor: 13.807

Review 5.  RNA phase separation-mediated direction of molecular trafficking under conditions of molecular crowding.

Authors:  Kazuki Kohata; Daisuke Miyoshi
Journal:  Biophys Rev       Date:  2020-05-16

6.  Protein structure in context: the molecular landscape of angiogenesis.

Authors:  Elise A Span; David S Goodsell; Ramani Ramchandran; Margaret A Franzen; Tim Herman; Daniel S Sem
Journal:  Biochem Mol Biol Educ       Date:  2013 Jul-Aug       Impact factor: 1.160

7.  3D molecular models of whole HIV-1 virions generated with cellPACK.

Authors:  Graham T Johnson; David S Goodsell; Ludovic Autin; Stefano Forli; Michel F Sanner; Arthur J Olson
Journal:  Faraday Discuss       Date:  2014-09-25       Impact factor: 4.008

8.  cellPACK: a virtual mesoscope to model and visualize structural systems biology.

Authors:  Graham T Johnson; Ludovic Autin; Mostafa Al-Alusi; David S Goodsell; Michel F Sanner; Arthur J Olson
Journal:  Nat Methods       Date:  2014-12-01       Impact factor: 28.547

9.  Compartmentalization and Functionality of Nuclear Disorder: Intrinsic Disorder and Protein-Protein Interactions in Intra-Nuclear Compartments.

Authors:  Fanchi Meng; Insung Na; Lukasz Kurgan; Vladimir N Uversky
Journal:  Int J Mol Sci       Date:  2015-12-25       Impact factor: 5.923

10.  Defining the subcellular interface of nanoparticles by live-cell imaging.

Authors:  Peter H Hemmerich; Anna H von Mikecz
Journal:  PLoS One       Date:  2013-04-26       Impact factor: 3.240

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