Literature DB >> 23798001

Oncogene-induced cellular senescence elicits an anti-Warburg effect.

Mingxi Li1, Kenneth R Durbin, Steve M M Sweet, Jeremiah D Tipton, Yupeng Zheng, Neil L Kelleher.   

Abstract

Cellular senescence, an irreversible cell cycle arrest induced by a diversity of stimuli, has been considered as an innate tumor suppressing mechanism with implications and applications in cancer therapy. Using a targeted proteomics approach, we show that fibroblasts induced into senescence by expression of oncogenic Ras exhibit a decrease of global acetylation on all core histones, consistent with formation of senescence-associated heterochromatic foci. We also detected clear increases in repressive markers (e.g. >50% elevation of H3K27me2/3) along with decreases in histone marks associated with increased transcriptional expression/elongation (e.g. H3K36me2/3). Despite the increases in repressive marks of chromatin, 179 loci (of 2206 total) were found to be upregulated by global quantitative proteomics. The changes in the cytosolic proteome indicated an upregulation of mitochondrial proteins and downregulation of proteins involved in glycolysis. These alterations in primary metabolism are opposite to the well-known Warburg effect observed in cancer cells. This study significantly improves our understanding of stress-induced senescence and provides a potential application for triggering it in antiproliferative strategies that target the primary metabolism in cancer cells.
© 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Cell biology; Histones; Metabolism; Oxidative phosphorylation; Senescence

Mesh:

Substances:

Year:  2013        PMID: 23798001      PMCID: PMC3867201          DOI: 10.1002/pmic.201200298

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  53 in total

1.  Identification of novel candidates for replicative senescence by functional proteomics.

Authors:  Silvia Benvenuti; Rainer Cramer; Jim Bruce; Michael D Waterfield; Parmjit S Jat
Journal:  Oncogene       Date:  2002-06-27       Impact factor: 9.867

2.  In-gel digestion for mass spectrometric characterization of proteins and proteomes.

Authors:  Andrej Shevchenko; Henrik Tomas; Jan Havlis; Jesper V Olsen; Matthias Mann
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

3.  Chemical derivatization of histones for facilitated analysis by mass spectrometry.

Authors:  Benjamin A Garcia; Sahana Mollah; Beatrix M Ueberheide; Scott A Busby; Tara L Muratore; Jeffrey Shabanowitz; Donald F Hunt
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

4.  Pervasive combinatorial modification of histone H3 in human cells.

Authors:  Benjamin A Garcia; James J Pesavento; Craig A Mizzen; Neil L Kelleher
Journal:  Nat Methods       Date:  2007-05-21       Impact factor: 28.547

5.  DNA damage is able to induce senescence in tumor cells in vitro and in vivo.

Authors:  Robert H te Poele; Andrei L Okorokov; Lesley Jardine; Jeffrey Cummings; Simon P Joel
Journal:  Cancer Res       Date:  2002-03-15       Impact factor: 12.701

6.  H3K36 methylation antagonizes PRC2-mediated H3K27 methylation.

Authors:  Wen Yuan; Mo Xu; Chang Huang; Nan Liu; She Chen; Bing Zhu
Journal:  J Biol Chem       Date:  2011-01-14       Impact factor: 5.157

7.  Oncogenic ras provokes premature cell senescence associated with accumulation of p53 and p16INK4a.

Authors:  M Serrano; A W Lin; M E McCurrach; D Beach; S W Lowe
Journal:  Cell       Date:  1997-03-07       Impact factor: 41.582

Review 8.  Hallmarks of senescence in carcinogenesis and cancer therapy.

Authors:  Jerry W Shay; Igor B Roninson
Journal:  Oncogene       Date:  2004-04-12       Impact factor: 9.867

9.  One-pot shotgun quantitative mass spectrometry characterization of histones.

Authors:  Mariana D Plazas-Mayorca; Barry M Zee; Nicolas L Young; Ian M Fingerman; Gary LeRoy; Scott D Briggs; Benjamin A Garcia
Journal:  J Proteome Res       Date:  2009-11       Impact factor: 4.466

10.  Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence.

Authors:  Masashi Narita; Sabrina Nũnez; Edith Heard; Masako Narita; Athena W Lin; Stephen A Hearn; David L Spector; Gregory J Hannon; Scott W Lowe
Journal:  Cell       Date:  2003-06-13       Impact factor: 41.582

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  20 in total

1.  Inhibition of nucleotide synthesis promotes replicative senescence of human mammary epithelial cells.

Authors:  Alireza Delfarah; Sydney Parrish; Jason A Junge; Jesse Yang; Frances Seo; Si Li; John Mac; Pin Wang; Scott E Fraser; Nicholas A Graham
Journal:  J Biol Chem       Date:  2019-05-28       Impact factor: 5.157

Review 2.  Translational Control during Cellular Senescence.

Authors:  Matthew J Payea; Carlos Anerillas; Ravi Tharakan; Myriam Gorospe
Journal:  Mol Cell Biol       Date:  2021-01-25       Impact factor: 4.272

3.  ATM couples replication stress and metabolic reprogramming during cellular senescence.

Authors:  Katherine M Aird; Andrew J Worth; Nathaniel W Snyder; Joyce V Lee; Sharanya Sivanand; Qin Liu; Ian A Blair; Kathryn E Wellen; Rugang Zhang
Journal:  Cell Rep       Date:  2015-04-30       Impact factor: 9.423

4.  Comprehensive analysis of the ubiquitinome during oncogene-induced senescence in human fibroblasts.

Authors:  Fee Bengsch; Zhigang Tu; Hsin-Yao Tang; Hengrui Zhu; David W Speicher; Rugang Zhang
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

5.  Detection of the Ubiquitinome in Cells Undergoing Oncogene-Induced Senescence.

Authors:  Hengrui Zhu; Linh Le; Hsin-Yao Tang; David W Speicher; Rugang Zhang
Journal:  Methods Mol Biol       Date:  2017

Review 6.  Systems Proteomics View of the Endogenous Human Claudin Protein Family.

Authors:  Fei Liu; Michael Koval; Shoba Ranganathan; Susan Fanayan; William S Hancock; Emma K Lundberg; Ronald C Beavis; Lydie Lane; Paula Duek; Leon McQuade; Neil L Kelleher; Mark S Baker
Journal:  J Proteome Res       Date:  2016-01-12       Impact factor: 4.466

Review 7.  Melanocytic nevi and melanoma: unraveling a complex relationship.

Authors:  W E Damsky; M Bosenberg
Journal:  Oncogene       Date:  2017-06-12       Impact factor: 9.867

8.  Proteomic characterisation of triple negative breast cancer cells following CDK4/6 inhibition.

Authors:  Melina Beykou; Mar Arias-Garcia; Theodoros I Roumeliotis; Jyoti S Choudhary; Nicolas Moser; Pantelis Georgiou; Chris Bakal
Journal:  Sci Data       Date:  2022-07-11       Impact factor: 8.501

9.  Quantitation and Identification of Thousands of Human Proteoforms below 30 kDa.

Authors:  Kenneth R Durbin; Luca Fornelli; Ryan T Fellers; Peter F Doubleday; Masashi Narita; Neil L Kelleher
Journal:  J Proteome Res       Date:  2016-02-11       Impact factor: 4.466

10.  Metabolic stress is a barrier to Epstein-Barr virus-mediated B-cell immortalization.

Authors:  Karyn McFadden; Amy Y Hafez; Rigel Kishton; Joshua E Messinger; Pavel A Nikitin; Jeffrey C Rathmell; Micah A Luftig
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-22       Impact factor: 11.205

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