Literature DB >> 17406544

In-gel digestion for mass spectrometric characterization of proteins and proteomes.

Andrej Shevchenko1, Henrik Tomas, Jan Havlis, Jesper V Olsen, Matthias Mann.   

Abstract

In-gel digestion of proteins isolated by gel electrophoresis is a cornerstone of mass spectrometry (MS)-driven proteomics. The 10-year-old recipe by Shevchenko et al. has been optimized to increase the speed and sensitivity of analysis. The protocol is for the in-gel digestion of both silver and Coomassie-stained protein spots or bands and can be followed by MALDI-MS or LC-MS/MS analysis to identify proteins at sensitivities better than a few femtomoles of protein starting material.

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Year:  2006        PMID: 17406544     DOI: 10.1038/nprot.2006.468

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  1666 in total

1.  The acidic A-domain of Arabidopsis TOC159 occurs as a hyperphosphorylated protein.

Authors:  Birgit Agne; Charles Andrès; Cyril Montandon; Bastien Christ; Anouk Ertan; Friederike Jung; Sibylle Infanger; Sylvain Bischof; Sacha Baginsky; Felix Kessler
Journal:  Plant Physiol       Date:  2010-05-10       Impact factor: 8.340

2.  Changes in protein expression of pacific oyster Crassostrea gigas exposed in situ to urban sewage.

Authors:  Fabrício Flores-Nunes; Tânia Gomes; Rui Company; Roberta R M Moraes; Silvio T Sasaki; Satie Taniguchi; Márcia C Bicego; Cláudio M R Melo; Afonso C D Bainy; Maria J Bebianno
Journal:  Environ Sci Pollut Res Int       Date:  2014-11-16       Impact factor: 4.223

3.  Cyclostreptin derivatives specifically target cellular tubulin and further map the paclitaxel site.

Authors:  Enrique Calvo; Isabel Barasoain; Ruth Matesanz; Benet Pera; Emilio Camafeita; Oriol Pineda; Ernest Hamel; Christopher D Vanderwal; José Manuel Andreu; Juan A López; José Fernando Díaz
Journal:  Biochemistry       Date:  2011-12-30       Impact factor: 3.162

4.  Transmembrane protein 147 (TMEM147) is a novel component of the Nicalin-NOMO protein complex.

Authors:  Ulf Dettmer; Peer-Hendrik Kuhn; Claudia Abou-Ajram; Stefan F Lichtenthaler; Marcus Krüger; Elisabeth Kremmer; Christian Haass; Christof Haffner
Journal:  J Biol Chem       Date:  2010-06-10       Impact factor: 5.157

5.  A plasmodesmata-localized protein mediates crosstalk between cell-to-cell communication and innate immunity in Arabidopsis.

Authors:  Jung-Youn Lee; Xu Wang; Weier Cui; Ross Sager; Shannon Modla; Kirk Czymmek; Boris Zybaliov; Klaas van Wijk; Chong Zhang; Hua Lu; Venkatachalam Lakshmanan
Journal:  Plant Cell       Date:  2011-09-20       Impact factor: 11.277

6.  Nucleoredoxin guards against oxidative stress by protecting antioxidant enzymes.

Authors:  Sophie Kneeshaw; Rumana Keyani; Valérie Delorme-Hinoux; Lisa Imrie; Gary J Loake; Thierry Le Bihan; Jean-Philippe Reichheld; Steven H Spoel
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-19       Impact factor: 11.205

7.  Parkinson's disease-related phosphorylation at Tyr39 rearranges α-synuclein amyloid fibril structure revealed by cryo-EM.

Authors:  Kun Zhao; Yeh-Jun Lim; Zhenying Liu; Houfang Long; Yunpeng Sun; Jin-Jian Hu; Chunyu Zhao; Youqi Tao; Xing Zhang; Dan Li; Yan-Mei Li; Cong Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-31       Impact factor: 11.205

8.  Lysine biotinylation and methionine oxidation in the heat shock protein HSP60 synergize in the elimination of reactive oxygen species in human cell cultures.

Authors:  Yong Li; Sridhar A Malkaram; Jie Zhou; Janos Zempleni
Journal:  J Nutr Biochem       Date:  2014-01-28       Impact factor: 6.048

9.  Notch signaling regulates the phosphorylation of Akt and survival of lipopolysaccharide-activated macrophages via regulator of G protein signaling 19 (RGS19).

Authors:  Naunpun Sangphech; Barbara A Osborne; Tanapat Palaga
Journal:  Immunobiology       Date:  2014-04-06       Impact factor: 3.144

10.  Proteomic analysis of salt stress and recovery in leaves of Vigna unguiculata cultivars differing in salt tolerance.

Authors:  Carlos Eduardo Braga de Abreu; Gyedre dos Santos Araújo; Ana Cristina de Oliveira Monteiro-Moreira; José Hélio Costa; Hugo de Brito Leite; Frederico Bruno Mendes Batista Moreno; José Tarquinio Prisco; Enéas Gomes-Filho
Journal:  Plant Cell Rep       Date:  2014-04-26       Impact factor: 4.570

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