Literature DB >> 23795132

5-Benz-yloxy-3-methyl-1-tosyl-1H-indole.

Gustavo Pozza Silveira1, Allen G Oliver, Bruce C Noll.   

Abstract

The title compound, C23H21NO3S, represents one of the few examples of a 5-substituted indole with a toluene-sulfonyl group bonded to the N atom. The benzyl group adopts a synclinal geometry with respect to the indole ring [dihedral angle = 59.95 (4)°], while the tolyl ring is oriented close to perpendicular to the indole ring, making a dihedral angle of 81.85 (3)°. The indole N atom exhibits a slight pyramidalization.

Entities:  

Year:  2013        PMID: 23795132      PMCID: PMC3685113          DOI: 10.1107/S1600536813014001

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to physostigmine and related marine natural products, see: Marino et al. (1989 ▶, 1992 ▶). For recent, related structural and synthetic studies, see: Pozza Silveira et al. (2012 ▶); Silveira & Marino (2013 ▶). For related compounds, see: Xiong et al. (2001 ▶); Witulski et al. (2000 ▶). For reference structural data see: Allen et al. (1995 ▶).

Experimental

Crystal data

C23H21NO3S M = 391.47 Monoclinic, a = 8.317 (3) Å b = 15.601 (6) Å c = 14.752 (5) Å β = 90.884 (11)° V = 1914.1 (12) Å3 Z = 4 Mo Kα radiation μ = 0.19 mm−1 T = 100 K 0.39 × 0.33 × 0.15 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.636, T max = 0.746 30660 measured reflections 6415 independent reflections 5550 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.102 S = 1.04 6415 reflections 255 parameters H-atom parameters constrained Δρmax = 0.59 e Å−3 Δρmin = −0.42 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2012 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813014001/kj2226sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813014001/kj2226Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813014001/kj2226Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H21NO3SDx = 1.358 Mg m3
Mr = 391.47Melting point: 402 K
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 8.317 (3) ÅCell parameters from 9980 reflections
b = 15.601 (6) Åθ = 2.6–31.6°
c = 14.752 (5) ŵ = 0.19 mm1
β = 90.884 (11)°T = 100 K
V = 1914.1 (12) Å3Block, colourless
Z = 40.39 × 0.33 × 0.15 mm
F(000) = 824
Bruker APEXII diffractometer6415 independent reflections
Radiation source: fine-focus sealed tube5550 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
Detector resolution: 8.33 pixels mm-1θmax = 31.6°, θmin = 1.9°
combination of ω and φ–scansh = −10→12
Absorption correction: multi-scan (SADABS; Bruker, 2008)k = −22→22
Tmin = 0.636, Tmax = 0.746l = −21→21
30660 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0536P)2 + 0.775P] where P = (Fo2 + 2Fc2)/3
6415 reflections(Δ/σ)max = 0.001
255 parametersΔρmax = 0.59 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
N10.84082 (10)0.26302 (5)0.60391 (6)0.01478 (15)
O10.35145 (9)0.40007 (6)0.39442 (5)0.02043 (16)
S10.98068 (3)0.19050 (2)0.58368 (2)0.01438 (6)
O21.08199 (9)0.19022 (5)0.66274 (5)0.01998 (15)
C20.77142 (12)0.27143 (6)0.69017 (6)0.01592 (17)
H20.82030.25340.74560.019*
O31.04493 (9)0.21088 (5)0.49733 (5)0.01909 (15)
C30.62522 (12)0.30883 (6)0.68241 (6)0.01519 (17)
C3'0.59545 (12)0.32359 (6)0.58690 (6)0.01410 (17)
C40.46627 (12)0.36208 (7)0.54150 (6)0.01652 (18)
H40.37770.38460.57370.020*
C50.47154 (12)0.36630 (7)0.44789 (6)0.01665 (18)
C60.60430 (13)0.33495 (7)0.40057 (7)0.01818 (19)
H60.60500.33900.33630.022*
C70.73415 (12)0.29828 (7)0.44561 (7)0.01689 (18)
H70.82460.27770.41360.020*
C7'0.72720 (12)0.29276 (6)0.53938 (6)0.01406 (16)
C80.51260 (13)0.33196 (7)0.75577 (7)0.0202 (2)
H8A0.56230.31870.81480.030*
H8B0.41290.29910.74840.030*
H8C0.48840.39340.75250.030*
C90.21302 (12)0.42980 (7)0.44164 (7)0.01792 (18)
H9A0.24260.47920.48060.022*
H9B0.17130.38360.48080.022*
C100.08711 (11)0.45595 (6)0.37411 (6)0.01452 (17)
C110.02533 (13)0.53835 (7)0.37424 (7)0.01724 (18)
H110.06740.57950.41570.021*
C12−0.09749 (14)0.56142 (7)0.31438 (7)0.0217 (2)
H12−0.13900.61810.31480.026*
C13−0.15915 (13)0.50175 (8)0.25425 (7)0.0240 (2)
H13−0.24470.51710.21400.029*
C14−0.09673 (13)0.41950 (8)0.25233 (7)0.0222 (2)
H14−0.13800.37880.21010.027*
C150.02576 (13)0.39676 (7)0.31194 (7)0.01826 (18)
H150.06850.34030.31050.022*
C160.87513 (12)0.09408 (6)0.57724 (6)0.01472 (17)
C170.82732 (14)0.06170 (7)0.49366 (7)0.0208 (2)
H170.85710.08970.43920.025*
C180.73530 (15)−0.01231 (7)0.49093 (7)0.0232 (2)
H180.7026−0.03520.43390.028*
C190.68993 (13)−0.05376 (7)0.56976 (7)0.01902 (19)
C200.73877 (14)−0.01942 (7)0.65257 (7)0.0206 (2)
H200.7076−0.04690.70700.025*
C210.83179 (13)0.05392 (7)0.65732 (7)0.01885 (19)
H210.86550.07650.71430.023*
C220.59305 (15)−0.13461 (8)0.56597 (9)0.0263 (2)
H22A0.5294−0.13600.50950.040*
H22B0.5209−0.13660.61780.040*
H22C0.6654−0.18420.56810.040*
U11U22U33U12U13U23
N10.0144 (4)0.0164 (4)0.0135 (3)0.0039 (3)−0.0007 (3)0.0004 (3)
O10.0149 (3)0.0329 (4)0.0135 (3)0.0072 (3)−0.0001 (3)0.0038 (3)
S10.01210 (11)0.01661 (11)0.01444 (11)0.00244 (8)0.00002 (8)0.00062 (7)
O20.0160 (3)0.0249 (4)0.0189 (3)0.0024 (3)−0.0046 (3)0.0003 (3)
C20.0187 (4)0.0165 (4)0.0125 (4)0.0018 (3)−0.0011 (3)0.0009 (3)
O30.0167 (3)0.0226 (3)0.0180 (3)0.0019 (3)0.0042 (3)0.0027 (3)
C30.0174 (4)0.0165 (4)0.0116 (4)0.0017 (3)−0.0001 (3)0.0003 (3)
C3'0.0146 (4)0.0158 (4)0.0119 (4)0.0009 (3)0.0003 (3)0.0002 (3)
C40.0149 (4)0.0211 (4)0.0135 (4)0.0037 (3)0.0005 (3)0.0011 (3)
C50.0148 (4)0.0214 (4)0.0137 (4)0.0021 (3)−0.0011 (3)0.0027 (3)
C60.0172 (4)0.0249 (5)0.0124 (4)0.0024 (4)0.0010 (3)0.0021 (3)
C70.0154 (4)0.0219 (4)0.0135 (4)0.0027 (3)0.0021 (3)0.0011 (3)
C7'0.0139 (4)0.0152 (4)0.0130 (4)0.0011 (3)−0.0007 (3)0.0010 (3)
C80.0221 (5)0.0251 (5)0.0136 (4)0.0054 (4)0.0027 (3)−0.0001 (3)
C90.0151 (4)0.0245 (5)0.0142 (4)0.0038 (4)0.0000 (3)0.0008 (3)
C100.0123 (4)0.0173 (4)0.0140 (4)0.0002 (3)0.0002 (3)0.0024 (3)
C110.0183 (5)0.0173 (4)0.0161 (4)0.0017 (3)0.0008 (3)−0.0004 (3)
C120.0221 (5)0.0246 (5)0.0186 (4)0.0094 (4)0.0021 (4)0.0036 (4)
C130.0169 (5)0.0378 (6)0.0171 (4)0.0061 (4)−0.0024 (4)0.0019 (4)
C140.0182 (5)0.0293 (5)0.0191 (4)−0.0035 (4)−0.0025 (4)−0.0031 (4)
C150.0181 (5)0.0166 (4)0.0201 (4)−0.0013 (3)−0.0003 (3)0.0003 (3)
C160.0146 (4)0.0155 (4)0.0140 (4)0.0031 (3)0.0007 (3)0.0000 (3)
C170.0269 (5)0.0216 (5)0.0140 (4)−0.0009 (4)−0.0005 (4)0.0006 (3)
C180.0292 (6)0.0226 (5)0.0178 (4)−0.0022 (4)−0.0025 (4)−0.0025 (4)
C190.0169 (4)0.0171 (4)0.0231 (5)0.0021 (3)0.0019 (4)−0.0016 (3)
C200.0231 (5)0.0202 (4)0.0187 (4)0.0007 (4)0.0054 (4)0.0007 (4)
C210.0228 (5)0.0196 (4)0.0142 (4)0.0009 (4)0.0023 (3)−0.0007 (3)
C220.0227 (5)0.0219 (5)0.0344 (6)−0.0032 (4)0.0025 (4)−0.0030 (4)
N1—C7'1.4096 (13)C17—C181.3855 (16)
N1—C21.4116 (13)C18—C191.3881 (16)
N1—S11.6531 (9)C19—C201.3889 (16)
O1—C51.3687 (12)C19—C221.4973 (16)
O1—C91.4320 (13)C20—C211.3824 (16)
S1—O31.4249 (9)C2—H20.9500
S1—O21.4284 (9)C4—H40.9500
S1—C161.7436 (11)C6—H60.9500
C2—C31.3521 (14)C7—H70.9500
C3—C3'1.4454 (14)C8—H8A0.9800
C3—C81.4866 (14)C8—H8B0.9800
C3'—C41.3933 (14)C8—H8C0.9800
C3'—C7'1.3955 (13)C9—H9A0.9900
C4—C51.3839 (14)C9—H9B0.9900
C5—C61.4035 (14)C11—H110.9500
C6—C71.3831 (14)C12—H120.9500
C7—C7'1.3880 (14)C13—H130.9500
C9—C101.4912 (14)C14—H140.9500
C10—C111.3844 (14)C15—H150.9500
C10—C151.3928 (14)C17—H170.9500
C11—C121.3874 (15)C18—H180.9500
C12—C131.3793 (17)C20—H200.9500
C13—C141.3847 (18)C21—H210.9500
C14—C151.3818 (15)C22—H22A0.9800
C16—C171.3852 (14)C22—H22B0.9800
C16—C211.3897 (14)C22—H22C0.9800
C7'—N1—C2107.40 (8)C20—C21—C16118.84 (10)
C7'—N1—S1124.73 (7)C3—C2—H2125.0
C2—N1—S1121.67 (7)N1—C2—H2125.0
C5—O1—C9115.43 (8)C5—C4—H4121.2
O3—S1—O2120.40 (5)C3'—C4—H4121.2
O3—S1—N1106.46 (5)C7—C6—H6119.3
O2—S1—N1105.22 (5)C5—C6—H6119.3
O3—S1—C16109.83 (5)C6—C7—H7121.3
O2—S1—C16109.39 (5)C7'—C7—H7121.3
N1—S1—C16104.19 (5)C3—C8—H8A109.5
C3—C2—N1110.09 (8)C3—C8—H8B109.5
C2—C3—C3'106.96 (9)H8A—C8—H8B109.5
C2—C3—C8128.25 (9)C3—C8—H8C109.5
C3'—C3—C8124.79 (9)H8A—C8—H8C109.5
C4—C3'—C7'120.85 (9)H8B—C8—H8C109.5
C4—C3'—C3131.03 (9)O1—C9—H9A109.9
C7'—C3'—C3108.11 (9)C10—C9—H9A109.9
C5—C4—C3'117.65 (9)O1—C9—H9B109.9
O1—C5—C4124.01 (9)C10—C9—H9B109.9
O1—C5—C6114.85 (9)H9A—C9—H9B108.3
C4—C5—C6121.14 (9)C10—C11—H11119.7
C7—C6—C5121.30 (9)C12—C11—H11119.7
C6—C7—C7'117.41 (9)C13—C12—H12120.1
C7—C7'—C3'121.62 (9)C11—C12—H12120.1
C7—C7'—N1130.97 (9)C12—C13—H13119.9
C3'—C7'—N1107.32 (8)C14—C13—H13119.9
O1—C9—C10108.98 (8)C15—C14—H14120.1
C11—C10—C15118.98 (9)C13—C14—H14120.1
C11—C10—C9120.67 (9)C14—C15—H15119.7
C15—C10—C9120.32 (9)C10—C15—H15119.7
C10—C11—C12120.64 (10)C16—C17—H17120.6
C13—C12—C11119.80 (10)C18—C17—H17120.6
C12—C13—C14120.18 (10)C17—C18—H18119.3
C15—C14—C13119.86 (10)C19—C18—H18119.3
C14—C15—C10120.52 (10)C21—C20—H20119.3
C17—C16—C21121.18 (10)C19—C20—H20119.3
C17—C16—S1120.03 (8)C20—C21—H21120.6
C21—C16—S1118.66 (8)C16—C21—H21120.6
C16—C17—C18118.73 (10)C19—C22—H22A109.5
C17—C18—C19121.41 (10)C19—C22—H22B109.5
C18—C19—C20118.53 (10)H22A—C22—H22B109.5
C18—C19—C22120.95 (10)C19—C22—H22C109.5
C20—C19—C22120.52 (10)H22A—C22—H22C109.5
C21—C20—C19121.32 (10)H22B—C22—H22C109.5
C7'—N1—S1—O342.42 (9)S1—N1—C7'—C7−27.34 (16)
C2—N1—S1—O3−168.81 (8)C2—N1—C7'—C3'3.62 (11)
C7'—N1—S1—O2171.26 (8)S1—N1—C7'—C3'156.08 (7)
C2—N1—S1—O2−39.96 (9)C5—O1—C9—C10−174.12 (9)
C7'—N1—S1—C16−73.66 (9)O1—C9—C10—C11−122.47 (10)
C2—N1—S1—C1675.11 (9)O1—C9—C10—C1559.84 (12)
C7'—N1—C2—C3−3.23 (11)C15—C10—C11—C120.98 (15)
S1—N1—C2—C3−156.71 (8)C9—C10—C11—C12−176.74 (10)
N1—C2—C3—C3'1.52 (11)C10—C11—C12—C130.17 (16)
N1—C2—C3—C8−178.24 (10)C11—C12—C13—C14−1.24 (17)
C2—C3—C3'—C4−178.08 (11)C12—C13—C14—C151.14 (17)
C8—C3—C3'—C41.69 (18)C13—C14—C15—C100.02 (16)
C2—C3—C3'—C7'0.77 (11)C11—C10—C15—C14−1.07 (15)
C8—C3—C3'—C7'−179.46 (10)C9—C10—C15—C14176.66 (10)
C7'—C3'—C4—C51.80 (15)O3—S1—C16—C17−17.23 (10)
C3—C3'—C4—C5−179.47 (10)O2—S1—C16—C17−151.44 (9)
C9—O1—C5—C4−1.70 (15)N1—S1—C16—C1796.46 (9)
C9—O1—C5—C6178.08 (9)O3—S1—C16—C21166.80 (8)
C3'—C4—C5—O1178.12 (10)O2—S1—C16—C2132.59 (10)
C3'—C4—C5—C6−1.65 (16)N1—S1—C16—C21−79.50 (9)
O1—C5—C6—C7−179.40 (10)C21—C16—C17—C18−0.29 (16)
C4—C5—C6—C70.38 (17)S1—C16—C17—C18−176.15 (9)
C5—C6—C7—C7'0.75 (16)C16—C17—C18—C190.40 (17)
C6—C7—C7'—C3'−0.59 (15)C17—C18—C19—C200.04 (17)
C6—C7—C7'—N1−176.76 (10)C17—C18—C19—C22−178.85 (11)
C4—C3'—C7'—C7−0.71 (15)C18—C19—C20—C21−0.61 (17)
C3—C3'—C7'—C7−179.70 (9)C22—C19—C20—C21178.29 (10)
C4—C3'—C7'—N1176.26 (9)C19—C20—C21—C160.71 (16)
C3—C3'—C7'—N1−2.73 (11)C17—C16—C21—C20−0.25 (16)
C2—N1—C7'—C7−179.80 (11)S1—C16—C21—C20175.66 (8)
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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis of novel analogues of marine indole alkaloids: mono(indolyl)-4-trifluoromethylpyridines and bis(indolyl)-4-trifluoromethylpyridines as potential anticancer agents.

Authors:  W N Xiong; C G Yang; B Jiang
Journal:  Bioorg Med Chem       Date:  2001-07       Impact factor: 3.641

3.  Enantioselective synthesis of dihydro-1H-benzindoles.

Authors:  Gustavo P Silveira; Joseph P Marino
Journal:  J Org Chem       Date:  2013-03-22       Impact factor: 4.354

4.  (R)-4-Isopropyl-3-isopropyl-sulfanyl-5,5-diphenyl-1,3-oxazolidin-2-one.

Authors:  Gustavo Pozza Silveira; Cassandra Bonfante de Carvallho; Allen Oliver
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13
  4 in total
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1.  Crystal structure of (4R,5S)-4-methyl-3-methyl-sulfinyl-5-phenyl-1,3-oxazolidin-2-one.

Authors:  Gustavo Pozza Silveira; Vinicius Flores da Silva; Allen G Oliver
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-11-15

2.  Crystal structure of 4-methyl-N-{(E)-meth-yl[(3aR,8aS)-2-oxo-3,3a,8,8a-tetra-hydro-2H-indeno-[1,2-d][1,3]oxazol-3-yl]-λ(4)-sulfanyl-idene}benzene-sulfonamide.

Authors:  Patrícia A Pereira; Bruce C Noll; Allen G Oliver; Gustavo P Silveira
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-12-31

3.  7-Methyl-5-[(4-methyl-benzene)-sulfon-yl]-2H,5H-[1,3]dioxolo[4,5-f]indole: crystal structure and Hirshfeld analysis.

Authors:  Akbar Ali; Julio Zukerman-Schpector; Márcio Weber Paixão; Mukesh M Jotani; Edward R T Tiekink
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-01-19
  3 in total

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