Literature DB >> 23795028

1-[3-(2-Benz-yloxy-6-hy-droxy-4-methyl-phen-yl)-5-[3,5-bis-(tri-fluoro-meth-yl)phen-yl]-4,5-di-hydro-1H-pyrazol-1-yl]propane-1-one.

U H Patel1, S A Gandhi, V M Barot, N V S Varma.   

Abstract

In the title compound, C28H24F6N2O3, the mean plane of the central pyrazoline ring forms dihedral angles of 2.08 (9) and 69.02 (16)° with the 2-benz-yloxy-6-hy-droxy-4-methyl-phenyl and 3,5-bis-(tri-fluoro-meth-yl)phenyl rings, respectively. The dihedral angle between the mean planes of the pyrazoline and 3,5-bis-(tri-fluoro-meth-yl)phenyl rings is 68.97 (9)°. An intra-molecular O-H⋯N hydrogen bond is observed, which forms an S(6) graph-set motif. In the crystal, pairs of weak C-H⋯F halogen inter-actions link the mol-ecules into inversion dimers while molecular chains along [100] are formed by C-H⋯O contacts.

Entities:  

Year:  2013        PMID: 23795028      PMCID: PMC3684926          DOI: 10.1107/S160053681301180X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For pharmacalogical and anti­cancer properties of pyrazoline derivatives, see: Smith et al. (2001 ▶). For graph-set motifs, see: Bernstein et al., (1995 ▶). For related structures, see: Patel et al. (2007 ▶, 2012 ▶).

Experimental

Crystal data

C28H24F6N2O3 M = 550.49 Monoclinic, a = 4.8822 (2) Å b = 23.4752 (9) Å c = 22.4311 (9) Å β = 91.494 (2)° V = 2569.97 (18) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 273 K 0.54 × 0.34 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.951, T max = 0.988 19610 measured reflections 4514 independent reflections 2491 reflections with I > 2σ(I) R int = 0.075

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.246 S = 1.00 4514 reflections 352 parameters H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.41 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶ ); cell refinement: SAINT (Bruker, 2008 ▶ ); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681301180X/jj2162sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681301180X/jj2162Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S160053681301180X/jj2162Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H24F6N2O3Z = 4
Mr = 550.49F(000) = 1136
Monoclinic, P21/nDx = 1.423 Mg m3
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 4.8822 (2) Åθ = 2.9–27.7°
b = 23.4752 (9) ŵ = 0.12 mm1
c = 22.4311 (9) ÅT = 273 K
β = 91.494 (2)°Needle, white
V = 2569.97 (18) Å30.54 × 0.34 × 0.10 mm
Bruker Kappa APEXII CCD diffractometer4514 independent reflections
Radiation source: sealed X-ray tube2491 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.075
CCD scansθmax = 25.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −5→5
Tmin = 0.951, Tmax = 0.988k = −27→27
19610 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.246H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.1524P)2] where P = (Fo2 + 2Fc2)/3
4514 reflections(Δ/σ)max < 0.001
352 parametersΔρmax = 0.56 e Å3
0 restraintsΔρmin = −0.41 e Å3
Experimental. IR (cm-1): 2929 (C—H str. (asym) alkyl), 1458 (C—H def (asym)alkyl), 1387(C—H def (sym) alkyl), 3072 (C—H str.arom.), 1593. (C=Cstr. arom.), 1128 (C—H i.p.def arom.), 847 (C—H o.o.p.def.arom.), 1272 (C—O—C (sym) ether), 1066 (C—O—C (asym) ether), 3380(OHstr. phenol). 1659 (N—CO&not; CH2CH3), 1379 (N-COCH2CH3 def., pyrazoline), 1588 (C=N str., pyrazoline), 2863 (C—H ring (str.), pyrazoline), 682 (C—H def. of CH2, pyrazoline), 1197 (C—N str., pyrazoline), 1117 (C—F str.).1H NMR (CDCl3) δp.p.m.: 0.96 (trip, 3H, J=7.3 &7.2 Hz), 1.70 (Qur, 2H),2.31(s,3H), 3.36 (dd, 1H, J=15.3 & 3.5 Hz), 3.83 (dd, 1H, J=11.7 & 7.2 Hz), 5.02 (s, 2H), 5.32 (trip, 1H, J= 3.1 & 8.08 Hz), 6.33 (S, 1H), 6.52 (S,1H), 7.16–7.23(m, 8H), 11.24 (s, 1H).13C NMR (CDCl3) δp.p.m.: 21.98(C-1, CH3), 70.91 (C-2,CH2 C6 H5), 159.37(C-3,Pyrazoline), 46.49 (C-4,Pyrazoline), 57.92 (C-5, Pyrazoline), 170.03(C-6,CO CH2 CH3), 36.15 (C-7,CO CH2 CH3), 13.83 (C-8, CO CH2 CH3), 124.44(C-9, CF3), 124.44 (C-10, CF3).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.1214 (5)0.55900 (10)0.66924 (11)0.0539 (7)
N20.3088 (5)0.58603 (11)0.63303 (10)0.0543 (7)
C30.3815 (6)0.63423 (12)0.65664 (13)0.0496 (8)
C40.2432 (7)0.64580 (13)0.71404 (14)0.0579 (8)
H4A0.1350.68040.71150.069*
H4B0.37570.64920.74680.069*
C50.0589 (6)0.59313 (13)0.72178 (13)0.0515 (8)
H5−0.13380.60480.71950.062*
C6−0.0355 (7)0.51471 (13)0.64937 (14)0.0543 (8)
C70.0403 (7)0.48937 (15)0.59035 (15)0.0658 (9)
H7A0.22810.4760.59330.079*
H7B0.03150.5190.56020.079*
C8−0.1418 (8)0.44063 (16)0.57049 (18)0.0830 (12)
H8A−0.08270.42650.53270.124*
H8B−0.32770.45370.56650.124*
H8C−0.13070.41060.59950.124*
O9−0.2171 (5)0.49645 (10)0.68000 (10)0.0699 (7)
C100.5820 (6)0.67000 (13)0.62685 (13)0.0532 (8)
C110.6938 (7)0.65374 (13)0.57238 (14)0.0571 (8)
C120.8825 (7)0.68729 (15)0.54402 (15)0.0654 (9)
H120.94990.67550.50760.079*
C130.9730 (7)0.73805 (15)0.56867 (17)0.0640 (9)
C140.8683 (7)0.75504 (14)0.62281 (16)0.0657 (10)
H140.92780.78890.64020.079*
C150.6766 (7)0.72210 (14)0.65103 (15)0.0605 (9)
O160.6203 (5)0.60455 (10)0.54461 (10)0.0770 (8)
H160.50780.58770.56460.115*
C171.1739 (8)0.77503 (17)0.53729 (18)0.0844 (12)
H17A1.21230.80830.56090.127*
H17B1.09760.78630.49920.127*
H17C1.34040.75420.53170.127*
O180.5648 (6)0.73696 (10)0.70381 (11)0.0824 (8)
C190.6523 (9)0.78764 (16)0.73329 (19)0.0842 (12)
H19A0.63850.81970.70610.101*
H19B0.8420.78390.74670.101*
C200.4748 (8)0.79714 (18)0.78508 (18)0.0758 (11)
C210.3242 (9)0.8464 (2)0.7888 (2)0.0907 (13)
H210.34010.87330.75860.109*
C220.1532 (11)0.8579 (3)0.8341 (3)0.1063 (15)
H220.05720.89210.83520.128*
C230.1262 (10)0.8189 (3)0.8770 (3)0.1106 (17)
H230.00650.82620.90770.133*
C240.2689 (13)0.7684 (3)0.8775 (2)0.1151 (17)
H240.25020.7420.9080.138*
C250.4458 (10)0.7582 (2)0.8295 (2)0.0996 (14)
H250.54380.72420.82830.12*
C260.1172 (6)0.56381 (12)0.78105 (13)0.0485 (8)
C270.0104 (7)0.58758 (14)0.83107 (14)0.0611 (9)
H27−0.10310.61920.8270.073*
C280.0657 (8)0.56612 (15)0.88733 (15)0.0690 (10)
C290.2329 (8)0.51930 (16)0.89386 (15)0.0690 (10)
H290.27230.50440.93150.083*
C300.3422 (7)0.49453 (13)0.84349 (15)0.0603 (9)
C310.2878 (6)0.51677 (13)0.78742 (14)0.0546 (8)
H310.3650.50030.75410.065*
C32−0.0504 (12)0.5936 (2)0.94053 (18)0.0946 (14)
C360.5136 (10)0.44223 (17)0.8505 (2)0.0807 (12)
F370.3614 (6)0.39586 (11)0.85326 (17)0.1375 (12)
F380.6768 (7)0.43269 (13)0.80719 (16)0.1480 (14)
F390.6615 (8)0.44101 (13)0.89967 (16)0.1546 (14)
F33−0.1600 (12)0.56096 (17)0.97657 (17)0.219 (3)
F340.1149 (8)0.6254 (3)0.9680 (2)0.235 (3)
F35−0.2551 (10)0.6284 (2)0.92844 (15)0.190 (2)
U11U22U33U12U13U23
N10.0651 (17)0.0526 (16)0.0442 (15)−0.0098 (13)0.0082 (12)0.0046 (12)
N20.0614 (16)0.0565 (17)0.0448 (15)−0.0068 (13)0.0004 (12)0.0073 (12)
C30.0554 (18)0.0452 (18)0.0480 (18)0.0006 (14)−0.0038 (14)0.0049 (14)
C40.071 (2)0.0496 (18)0.054 (2)0.0050 (15)0.0087 (16)0.0039 (15)
C50.0540 (18)0.0507 (18)0.0499 (18)0.0048 (14)0.0050 (14)0.0034 (14)
C60.0599 (19)0.0476 (18)0.055 (2)−0.0019 (15)0.0010 (16)0.0059 (15)
C70.074 (2)0.064 (2)0.059 (2)−0.0114 (17)0.0156 (17)−0.0002 (16)
C80.091 (3)0.076 (3)0.083 (3)−0.017 (2)0.015 (2)−0.023 (2)
O90.0737 (15)0.0703 (16)0.0666 (16)−0.0161 (12)0.0206 (12)0.0007 (12)
C100.0591 (19)0.0504 (18)0.0498 (19)−0.0019 (15)0.0004 (15)0.0066 (14)
C110.067 (2)0.0492 (18)0.055 (2)−0.0003 (16)−0.0012 (16)0.0047 (16)
C120.073 (2)0.065 (2)0.059 (2)−0.0020 (18)0.0139 (17)0.0091 (17)
C130.062 (2)0.059 (2)0.071 (2)−0.0037 (17)0.0012 (17)0.0181 (18)
C140.080 (2)0.0501 (19)0.067 (2)−0.0122 (17)0.0000 (19)0.0046 (16)
C150.066 (2)0.059 (2)0.056 (2)−0.0091 (16)−0.0026 (16)0.0033 (16)
O160.0990 (19)0.0673 (16)0.0659 (16)−0.0194 (13)0.0254 (13)−0.0101 (12)
C170.084 (3)0.077 (3)0.093 (3)−0.017 (2)0.012 (2)0.022 (2)
O180.108 (2)0.0729 (17)0.0669 (17)−0.0386 (14)0.0217 (14)−0.0174 (13)
C190.094 (3)0.067 (2)0.092 (3)−0.022 (2)0.011 (2)−0.020 (2)
C200.082 (3)0.070 (3)0.075 (3)−0.015 (2)−0.001 (2)−0.019 (2)
C210.095 (3)0.089 (3)0.089 (3)−0.005 (3)0.003 (2)−0.026 (2)
C220.112 (4)0.104 (4)0.103 (4)−0.005 (3)0.006 (3)−0.019 (3)
C230.100 (4)0.123 (5)0.109 (4)−0.007 (3)0.007 (3)−0.048 (4)
C240.147 (5)0.117 (4)0.081 (4)−0.023 (4)0.004 (3)−0.006 (3)
C250.112 (4)0.094 (3)0.093 (4)−0.004 (3)0.000 (3)−0.011 (3)
C260.0526 (18)0.0464 (17)0.0467 (18)−0.0022 (13)0.0056 (14)0.0002 (13)
C270.072 (2)0.0548 (19)0.057 (2)0.0073 (16)0.0118 (17)0.0005 (16)
C280.095 (3)0.063 (2)0.050 (2)0.003 (2)0.0152 (18)−0.0002 (17)
C290.090 (3)0.069 (2)0.048 (2)−0.011 (2)0.0017 (18)0.0079 (17)
C300.071 (2)0.0503 (19)0.060 (2)−0.0009 (16)0.0009 (17)0.0112 (16)
C310.0609 (19)0.0533 (19)0.0497 (19)0.0025 (15)0.0049 (15)0.0012 (15)
C320.141 (4)0.098 (3)0.046 (2)0.014 (3)0.010 (3)−0.008 (2)
C360.099 (3)0.065 (3)0.078 (3)0.011 (2)−0.009 (3)0.018 (2)
F370.136 (2)0.0594 (16)0.216 (3)0.0071 (15)−0.006 (2)0.0306 (18)
F380.167 (3)0.128 (2)0.152 (3)0.088 (2)0.065 (2)0.053 (2)
F390.187 (3)0.125 (2)0.148 (3)0.057 (2)−0.078 (2)0.0105 (19)
F330.400 (7)0.148 (3)0.119 (3)0.008 (4)0.160 (4)−0.001 (2)
F340.156 (3)0.362 (7)0.188 (4)−0.068 (4)0.061 (3)−0.206 (5)
F350.242 (4)0.229 (4)0.102 (2)0.119 (4)0.033 (3)−0.038 (2)
N1—C61.360 (4)C17—H17C0.96
N1—N21.392 (3)O18—C191.421 (4)
N1—C51.464 (4)C19—C201.484 (5)
N2—C31.295 (4)C19—H19A0.97
C3—C101.464 (4)C19—H19B0.97
C3—C41.495 (4)C20—C251.362 (6)
C4—C51.541 (4)C20—C211.374 (6)
C4—H4A0.97C21—C221.359 (6)
C4—H4B0.97C21—H210.93
C5—C261.517 (4)C22—C231.338 (7)
C5—H50.98C22—H220.93
C6—O91.214 (4)C23—C241.376 (8)
C6—C71.506 (5)C23—H230.93
C7—C81.509 (5)C24—C251.418 (7)
C7—H7A0.97C24—H240.93
C7—H7B0.97C25—H250.93
C8—H8A0.96C26—C271.368 (4)
C8—H8B0.96C26—C311.388 (4)
C8—H8C0.96C27—C281.379 (5)
C10—C111.404 (4)C27—H270.93
C10—C151.411 (4)C28—C291.374 (5)
C11—O161.356 (4)C28—C321.482 (5)
C11—C121.380 (5)C29—C301.390 (5)
C12—C131.381 (5)C29—H290.93
C12—H120.93C30—C311.381 (4)
C13—C141.389 (5)C30—C361.492 (5)
C13—C171.499 (5)C31—H310.93
C14—C151.380 (5)C32—F331.244 (6)
C14—H140.93C32—F341.251 (6)
C15—O181.362 (4)C32—F351.315 (6)
O16—H160.82C36—F381.291 (5)
C17—H17A0.96C36—F391.303 (5)
C17—H17B0.96C36—F371.320 (5)
C6—N1—N2122.0 (3)H17A—C17—H17C109.5
C6—N1—C5123.7 (3)H17B—C17—H17C109.5
N2—N1—C5112.0 (2)C15—O18—C19119.7 (3)
C3—N2—N1109.7 (2)O18—C19—C20108.4 (3)
N2—C3—C10119.6 (3)O18—C19—H19A110
N2—C3—C4112.7 (3)C20—C19—H19A110
C10—C3—C4127.7 (3)O18—C19—H19B110
C3—C4—C5103.3 (2)C20—C19—H19B110
C3—C4—H4A111.1H19A—C19—H19B108.4
C5—C4—H4A111.1C25—C20—C21117.1 (4)
C3—C4—H4B111.1C25—C20—C19123.0 (4)
C5—C4—H4B111.1C21—C20—C19119.9 (4)
H4A—C4—H4B109.1C22—C21—C20123.5 (5)
N1—C5—C26114.8 (2)C22—C21—H21118.2
N1—C5—C4102.3 (2)C20—C21—H21118.2
C26—C5—C4111.5 (2)C23—C22—C21118.5 (5)
N1—C5—H5109.3C23—C22—H22120.8
C26—C5—H5109.3C21—C22—H22120.8
C4—C5—H5109.3C22—C23—C24122.4 (5)
O9—C6—N1119.9 (3)C22—C23—H23118.8
O9—C6—C7123.9 (3)C24—C23—H23118.8
N1—C6—C7116.2 (3)C23—C24—C25117.3 (5)
C6—C7—C8113.8 (3)C23—C24—H24121.4
C6—C7—H7A108.8C25—C24—H24121.4
C8—C7—H7A108.8C20—C25—C24121.2 (5)
C6—C7—H7B108.8C20—C25—H25119.4
C8—C7—H7B108.8C24—C25—H25119.4
H7A—C7—H7B107.7C27—C26—C31118.7 (3)
C7—C8—H8A109.5C27—C26—C5117.8 (3)
C7—C8—H8B109.5C31—C26—C5123.3 (3)
H8A—C8—H8B109.5C26—C27—C28122.1 (3)
C7—C8—H8C109.5C26—C27—H27118.9
H8A—C8—H8C109.5C28—C27—H27118.9
H8B—C8—H8C109.5C29—C28—C27119.4 (3)
C11—C10—C15116.1 (3)C29—C28—C32120.0 (3)
C11—C10—C3121.4 (3)C27—C28—C32120.6 (4)
C15—C10—C3122.5 (3)C28—C29—C30119.2 (3)
O16—C11—C12116.5 (3)C28—C29—H29120.4
O16—C11—C10121.8 (3)C30—C29—H29120.4
C12—C11—C10121.7 (3)C31—C30—C29120.9 (3)
C11—C12—C13121.2 (3)C31—C30—C36120.1 (3)
C11—C12—H12119.4C29—C30—C36119.0 (3)
C13—C12—H12119.4C30—C31—C26119.7 (3)
C12—C13—C14118.5 (3)C30—C31—H31120.2
C12—C13—C17121.2 (4)C26—C31—H31120.2
C14—C13—C17120.3 (3)F33—C32—F34109.3 (5)
C15—C14—C13120.6 (3)F33—C32—F35100.3 (5)
C15—C14—H14119.7F34—C32—F35101.9 (5)
C13—C14—H14119.7F33—C32—C28115.8 (4)
O18—C15—C14123.2 (3)F34—C32—C28113.7 (5)
O18—C15—C10114.9 (3)F35—C32—C28114.2 (4)
C14—C15—C10121.9 (3)F38—C36—F39107.1 (4)
C11—O16—H16109.5F38—C36—F37104.6 (4)
C13—C17—H17A109.5F39—C36—F37104.0 (3)
C13—C17—H17B109.5F38—C36—C30114.8 (3)
H17A—C17—H17B109.5F39—C36—C30113.8 (4)
C13—C17—H17C109.5F37—C36—C30111.6 (4)
N1—C6—C7—C8−179.7 (3)C15—O18—C19—C20173.2 (3)
C14—C15—O18—C19−2.2 (5)O18—C19—C20—C21−120.8 (4)
D—H···AD—HH···AD···AD—H···A
O16—H16···N20.821.842.568 (3)147
C31—H31···O9i0.932.673.490 (4)148
C21—H21···F37ii0.932.723.488 (6)140
C29—H29···F33iii0.932.643.490 (5)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O16—H16⋯N20.821.842.568 (3)147
C31—H31⋯O9i 0.932.673.490 (4)148
C21—H21⋯F37ii 0.932.723.488 (6)140
C29—H29⋯F33iii 0.932.643.490 (5)152

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  C--H...O hydrogen-bonding and C--H...pi interactions in 3-(4-fluorophenyl)-1,5,7-trimethyl-1,2,3,4-tetrahydropyrido[2,3-d]pyrimidine-2,4-dione.

Authors:  Urmila H Patel; Pinal D Patel; Neha Thakker
Journal:  Acta Crystallogr C       Date:  2007-05-11       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  The anti-inflammatory activities of cannabinoid receptor ligands in mouse peritonitis models.

Authors:  S R Smith; G Denhardt; C Terminelli
Journal:  Eur J Pharmacol       Date:  2001-11-30       Impact factor: 4.432

4.  3-(2-Chloro-3-hy-droxy-4-meth-oxy-phen-yl)-1-(4,5-dimeth-oxy-2-methyl-phen-yl)prop-2-en-1-one.

Authors:  U H Patel; S A Gandhi; V M Barot; M C Patel
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-12

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  2 in total

1.  Crystal structure of 3,5-dimeth-oxy-2-[5-(naphthalen-1-yl)-4,5-di-hydro-1H-pyrazol-3-yl]phenol.

Authors:  Dongsoo Koh
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-09-12

2.  Crystal structure of 3-meth-oxy-2-[5-(naphthalen-1-yl)-4,5-di-hydro-1H-pyrazol-3-yl]phenol.

Authors:  Dongsoo Koh
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-10-07
  2 in total

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