Literature DB >> 26594549

Crystal structure of 3-meth-oxy-2-[5-(naphthalen-1-yl)-4,5-di-hydro-1H-pyrazol-3-yl]phenol.

Dongsoo Koh1.   

Abstract

In the title compound, C20H18N2O2, the central pyrazoline ring has an envelope conformation with the atom substituted by the naphthalene ring as the flap. It bridges a benzene ring and a naphthalene ring system which are almost normal to one another, making a dihedral angle of 82.03 (6) °. There is an intra-molecular O-H⋯N hydrogen bond forming an S(6) ring motif. In the crystal, mol-ecules are linked by pairs of N-H⋯π inter-actions, forming inversion dimers. There are also C-H⋯π inter-actions present and the dimers are linked via C-H⋯O hydrogen bonds, forming ribbons propagating along the a-axis direction.

Entities:  

Keywords:  C—H⋯π inter­action; N—H⋯π inter­action; crystal structure; hydrogen bonds; pyrazoline

Year:  2015        PMID: 26594549      PMCID: PMC4645021          DOI: 10.1107/S2056989015018472

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the biological properties and synthesis of pyrazoline derivatives, see: Viveka et al. (2015 ▸); Neudorfer et al. (2014 ▸); Hwang et al. (2013 ▸); Congiu et al. (2010 ▸). For the N—H⋯π inter­action, see: Naveen et al. (2015 ▸). For related structures, see: Zhu et al. (2013 ▸); Patel et al. (2013 ▸).

Experimental

Crystal data

C20H18N2O2 M = 318.36 Triclinic, a = 7.7280 (12) Å b = 8.6933 (14) Å c = 12.721 (2) Å α = 78.507 (4)° β = 73.781 (4)° γ = 76.148 (4)° V = 788.7 (2) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 147 K 0.23 × 0.14 × 0.10 mm

Data collection

Bruker Kappa APEX-DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2012 ▸) T min = 0.980, T max = 0.991 6731 measured reflections 3605 independent reflections 2963 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.119 S = 1.06 3605 reflections 226 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.26 e Å−3

Data collection: APEX2 (Bruker, 2012 ▸); cell refinement: SAINT (Bruker, 2012 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: PLATON (Spek, 2009 ▸); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▸) and PLATON. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989015018472/su5207sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015018472/su5207Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015018472/su5207Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015018472/su5207fig1.tif The mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. The intra­molecular O-H⋯N hydrogen bond is shown as a dashed line (see Table 1). Click here for additional data file. . DOI: 10.1107/S2056989015018472/su5207fig2.tif Part of the crystal structure of the title compound, showing the intra­molecular O—H⋯N hydrogen bond and the inter­molecular N—H⋯π inter­actions, as dashed lines (see Table 1). H atoms not involved in these inter­actions have been omitted for clarity. CCDC reference: 1429221 Additional supporting information: crystallographic information; 3D view; checkCIF report
C20H18N2O2Z = 2
Mr = 318.36F(000) = 336
Triclinic, P1Dx = 1.341 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.7280 (12) ÅCell parameters from 2949 reflections
b = 8.6933 (14) Åθ = 2.4–27.5°
c = 12.721 (2) ŵ = 0.09 mm1
α = 78.507 (4)°T = 147 K
β = 73.781 (4)°Needle, yellow
γ = 76.148 (4)°0.23 × 0.14 × 0.10 mm
V = 788.7 (2) Å3
Bruker Kappa APEX-DUO CCD diffractometer3605 independent reflections
Radiation source: fine-focus sealed tube2963 reflections with I > 2σ(I)
Bruker Triumph monochromatorRint = 0.027
φ and ω scansθmax = 27.5°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2012)h = −10→9
Tmin = 0.980, Tmax = 0.991k = −11→10
6731 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0564P)2 + 0.190P] where P = (Fo2 + 2Fc2)/3
3605 reflections(Δ/σ)max < 0.001
226 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.59916 (15)0.28958 (14)0.48006 (8)0.0359 (3)
O20.28750 (13)0.15225 (12)0.24649 (8)0.0271 (2)
N10.58945 (14)0.25517 (12)0.16583 (8)0.0194 (2)
N20.75708 (14)0.27317 (13)0.09019 (9)0.0201 (2)
C10.60118 (16)0.26040 (14)0.26482 (10)0.0185 (3)
C20.78599 (16)0.29279 (15)0.26322 (10)0.0206 (3)
H2A0.86800.19420.28810.025*
H2B0.77270.37560.30980.025*
C30.85658 (16)0.35262 (14)0.13973 (10)0.0187 (3)
H3A0.99180.31160.11560.022*
C40.81502 (15)0.53454 (14)0.11606 (10)0.0173 (2)
C50.67014 (16)0.61697 (15)0.07244 (11)0.0207 (3)
H5A0.59460.55890.05500.025*
C60.63041 (17)0.78560 (15)0.05276 (11)0.0236 (3)
H6A0.52910.83950.02240.028*
C70.73662 (17)0.87181 (15)0.07702 (11)0.0223 (3)
H7A0.70900.98540.06350.027*
C80.88810 (16)0.79261 (14)0.12231 (10)0.0182 (3)
C91.00239 (17)0.88065 (15)0.14546 (10)0.0219 (3)
H9A0.97540.99430.13190.026*
C101.15088 (17)0.80452 (16)0.18700 (11)0.0246 (3)
H10A1.22670.86490.20180.029*
C111.19088 (17)0.63583 (16)0.20777 (11)0.0239 (3)
H11A1.29400.58300.23670.029*
C121.08277 (16)0.54708 (15)0.18673 (10)0.0207 (3)
H12A1.11130.43360.20200.025*
C130.92878 (15)0.62248 (14)0.14245 (9)0.0171 (2)
C140.45128 (16)0.22550 (15)0.36055 (10)0.0206 (3)
C150.45112 (18)0.23952 (16)0.46981 (11)0.0260 (3)
C160.3089 (2)0.20441 (19)0.55885 (12)0.0347 (3)
H16A0.31100.21430.63150.042*
C170.1636 (2)0.1547 (2)0.54096 (13)0.0389 (4)
H17A0.06560.13110.60210.047*
C180.1581 (2)0.13886 (19)0.43663 (12)0.0340 (3)
H18A0.05710.10460.42600.041*
C190.30079 (17)0.17304 (16)0.34678 (11)0.0234 (3)
C200.6108 (2)0.3009 (2)0.58802 (13)0.0419 (4)
H20A0.72290.33890.58270.063*
H20B0.61400.19530.63320.063*
H20C0.50340.37640.62240.063*
H2O0.383 (3)0.178 (2)0.1972 (18)0.050 (5)*
H2N0.739 (2)0.318 (2)0.0247 (15)0.032 (4)*
U11U22U33U12U13U23
O10.0432 (6)0.0524 (7)0.0186 (5)−0.0193 (5)−0.0083 (4)−0.0069 (5)
O20.0268 (5)0.0338 (6)0.0235 (5)−0.0144 (4)−0.0055 (4)−0.0010 (4)
N10.0224 (5)0.0184 (5)0.0177 (5)−0.0075 (4)−0.0019 (4)−0.0034 (4)
N20.0237 (5)0.0202 (5)0.0167 (5)−0.0086 (4)−0.0009 (4)−0.0042 (4)
C10.0216 (6)0.0148 (6)0.0192 (6)−0.0041 (4)−0.0047 (5)−0.0027 (5)
C20.0218 (6)0.0197 (6)0.0210 (6)−0.0053 (4)−0.0059 (5)−0.0022 (5)
C30.0186 (5)0.0167 (6)0.0209 (6)−0.0045 (4)−0.0033 (4)−0.0036 (5)
C40.0175 (5)0.0171 (6)0.0160 (6)−0.0046 (4)−0.0003 (4)−0.0033 (4)
C50.0190 (6)0.0210 (6)0.0236 (6)−0.0063 (5)−0.0049 (5)−0.0045 (5)
C60.0209 (6)0.0222 (6)0.0265 (7)−0.0004 (5)−0.0079 (5)−0.0021 (5)
C70.0235 (6)0.0165 (6)0.0250 (7)−0.0019 (5)−0.0044 (5)−0.0033 (5)
C80.0196 (6)0.0183 (6)0.0155 (6)−0.0042 (4)−0.0003 (4)−0.0046 (5)
C90.0260 (6)0.0206 (6)0.0194 (6)−0.0074 (5)−0.0010 (5)−0.0066 (5)
C100.0267 (6)0.0306 (7)0.0213 (6)−0.0126 (5)−0.0041 (5)−0.0089 (5)
C110.0209 (6)0.0321 (7)0.0202 (6)−0.0041 (5)−0.0073 (5)−0.0055 (5)
C120.0213 (6)0.0208 (6)0.0194 (6)−0.0035 (5)−0.0046 (5)−0.0029 (5)
C130.0177 (5)0.0185 (6)0.0142 (6)−0.0039 (4)−0.0013 (4)−0.0032 (4)
C140.0242 (6)0.0177 (6)0.0181 (6)−0.0033 (5)−0.0034 (5)−0.0013 (5)
C150.0306 (7)0.0260 (7)0.0207 (7)−0.0052 (5)−0.0061 (5)−0.0024 (5)
C160.0419 (8)0.0403 (9)0.0171 (7)−0.0072 (6)−0.0017 (6)−0.0017 (6)
C170.0331 (8)0.0492 (10)0.0256 (8)−0.0127 (7)0.0054 (6)0.0028 (7)
C180.0271 (7)0.0419 (9)0.0301 (8)−0.0130 (6)−0.0030 (6)0.0036 (6)
C190.0243 (6)0.0220 (6)0.0217 (7)−0.0047 (5)−0.0049 (5)0.0013 (5)
C200.0533 (10)0.0545 (11)0.0247 (8)−0.0106 (8)−0.0159 (7)−0.0118 (7)
O1—C151.3637 (16)C8—C91.4183 (16)
O1—C201.4253 (17)C8—C131.4223 (17)
O2—C191.3582 (16)C9—C101.3675 (18)
O2—H2O0.87 (2)C9—H9A0.9500
N1—C11.2980 (16)C10—C111.4108 (19)
N1—N21.4032 (14)C10—H10A0.9500
N2—C31.4710 (15)C11—C121.3714 (17)
N2—H2N0.880 (18)C11—H11A0.9500
C1—C141.4662 (17)C12—C131.4201 (16)
C1—C21.5145 (16)C12—H12A0.9500
C2—C31.5387 (17)C14—C191.4109 (18)
C2—H2A0.9900C14—C151.4189 (18)
C2—H2B0.9900C15—C161.383 (2)
C3—C41.5218 (16)C16—C171.383 (2)
C3—H3A1.0000C16—H16A0.9500
C4—C51.3709 (17)C17—C181.375 (2)
C4—C131.4349 (16)C17—H17A0.9500
C5—C61.4097 (18)C18—C191.3885 (19)
C5—H5A0.9500C18—H18A0.9500
C6—C71.3634 (18)C20—H20A0.9800
C6—H6A0.9500C20—H20B0.9800
C7—C81.4174 (17)C20—H20C0.9800
C7—H7A0.9500
C15—O1—C20118.42 (12)C8—C9—H9A119.5
C19—O2—H2O108.3 (13)C9—C10—C11119.64 (11)
C1—N1—N2109.49 (10)C9—C10—H10A120.2
N1—N2—C3108.34 (9)C11—C10—H10A120.2
N1—N2—H2N110.6 (11)C12—C11—C10120.83 (11)
C3—N2—H2N116.6 (11)C12—C11—H11A119.6
N1—C1—C14120.08 (11)C10—C11—H11A119.6
N1—C1—C2111.19 (10)C11—C12—C13120.89 (12)
C14—C1—C2128.58 (11)C11—C12—H12A119.6
C1—C2—C3101.19 (9)C13—C12—H12A119.6
C1—C2—H2A111.5C12—C13—C8118.13 (11)
C3—C2—H2A111.5C12—C13—C4122.86 (11)
C1—C2—H2B111.5C8—C13—C4119.00 (10)
C3—C2—H2B111.5C19—C14—C15117.14 (11)
H2A—C2—H2B109.3C19—C14—C1120.32 (11)
N2—C3—C4114.54 (10)C15—C14—C1122.53 (11)
N2—C3—C2100.63 (9)O1—C15—C16123.05 (12)
C4—C3—C2111.44 (10)O1—C15—C14115.53 (11)
N2—C3—H3A110.0C16—C15—C14121.42 (13)
C4—C3—H3A110.0C15—C16—C17119.26 (13)
C2—C3—H3A110.0C15—C16—H16A120.4
C5—C4—C13119.03 (11)C17—C16—H16A120.4
C5—C4—C3122.04 (10)C18—C17—C16121.39 (13)
C13—C4—C3118.91 (10)C18—C17—H17A119.3
C4—C5—C6121.70 (11)C16—C17—H17A119.3
C4—C5—H5A119.1C17—C18—C19119.76 (14)
C6—C5—H5A119.1C17—C18—H18A120.1
C7—C6—C5120.35 (11)C19—C18—H18A120.1
C7—C6—H6A119.8O2—C19—C18116.51 (12)
C5—C6—H6A119.8O2—C19—C14122.46 (11)
C6—C7—C8120.27 (12)C18—C19—C14121.03 (12)
C6—C7—H7A119.9O1—C20—H20A109.5
C8—C7—H7A119.9O1—C20—H20B109.5
C7—C8—C9120.87 (11)H20A—C20—H20B109.5
C7—C8—C13119.64 (11)O1—C20—H20C109.5
C9—C8—C13119.47 (11)H20A—C20—H20C109.5
C10—C9—C8121.02 (12)H20B—C20—H20C109.5
C10—C9—H9A119.5
C1—N1—N2—C3−22.01 (13)C9—C8—C13—C120.77 (17)
N2—N1—C1—C14−172.78 (10)C7—C8—C13—C40.13 (17)
N2—N1—C1—C23.08 (13)C9—C8—C13—C4−178.41 (10)
N1—C1—C2—C315.56 (13)C5—C4—C13—C12−179.29 (11)
C14—C1—C2—C3−169.03 (11)C3—C4—C13—C122.02 (17)
N1—N2—C3—C4−89.55 (12)C5—C4—C13—C8−0.16 (17)
N1—N2—C3—C230.09 (12)C3—C4—C13—C8−178.84 (10)
C1—C2—C3—N2−26.20 (11)N1—C1—C14—C195.35 (18)
C1—C2—C3—C495.64 (10)C2—C1—C14—C19−169.70 (11)
N2—C3—C4—C512.88 (16)N1—C1—C14—C15−175.78 (11)
C2—C3—C4—C5−100.52 (13)C2—C1—C14—C159.2 (2)
N2—C3—C4—C13−168.47 (10)C20—O1—C15—C162.2 (2)
C2—C3—C4—C1378.13 (13)C20—O1—C15—C14−177.87 (13)
C13—C4—C5—C60.10 (18)C19—C14—C15—O1179.62 (11)
C3—C4—C5—C6178.75 (11)C1—C14—C15—O10.72 (18)
C4—C5—C6—C70.0 (2)C19—C14—C15—C16−0.46 (19)
C5—C6—C7—C80.00 (19)C1—C14—C15—C16−179.36 (13)
C6—C7—C8—C9178.47 (11)O1—C15—C16—C17179.83 (13)
C6—C7—C8—C13−0.06 (18)C14—C15—C16—C17−0.1 (2)
C7—C8—C9—C10−178.63 (12)C15—C16—C17—C180.3 (2)
C13—C8—C9—C10−0.10 (18)C16—C17—C18—C190.0 (2)
C8—C9—C10—C11−0.32 (19)C17—C18—C19—O2178.98 (13)
C9—C10—C11—C120.06 (19)C17—C18—C19—C14−0.6 (2)
C10—C11—C12—C130.63 (19)C15—C14—C19—O2−178.77 (11)
C11—C12—C13—C8−1.03 (18)C1—C14—C19—O20.16 (19)
C11—C12—C13—C4178.11 (11)C15—C14—C19—C180.80 (19)
C7—C8—C13—C12179.31 (11)C1—C14—C19—C18179.73 (12)
D—H···AD—HH···AD···AD—H···A
O2—H2O···N10.87 (2)1.79 (2)2.5681 (14)148.0 (19)
N2—H2N···Cg3i0.88 (2)2.56 (2)3.1811 (13)128.1 (14)
C3—H3A···Cg2i1.002.803.5306 (15)130
C12—H12A···O2ii0.952.543.4488 (17)161
Table 1

Hydrogen-bond geometry (, )

Cg2 and Cg3 are the centroids of rings C4C8/C13 and C8C13, respectively.

DHA DHHA D A DHA
O2H2ON10.87(2)1.79(2)2.5681(14)148.0(19)
N2H2N Cg3i 0.88(2)2.56(2)3.1811(13)128.1(14)
C3H3A Cg2i 1.002.803.5306(15)130
C12H12AO2ii 0.952.543.4488(17)161

Symmetry codes: (i) ; (ii) .

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