Literature DB >> 23737081

Calibrated predictions for multivariate competing risks models.

Malka Gorfine1, Li Hsu, David M Zucker, Giovanni Parmigiani.   

Abstract

Prediction models for time-to-event data play a prominent role in assessing the individual risk of a disease, such as cancer. Accurate disease prediction models provide an efficient tool for identifying individuals at high risk, and provide the groundwork for estimating the population burden and cost of disease and for developing patient care guidelines. We focus on risk prediction of a disease in which family history is an important risk factor that reflects inherited genetic susceptibility, shared environment, and common behavior patterns. In this work family history is accommodated using frailty models, with the main novel feature being allowing for competing risks, such as other diseases or mortality. We show through a simulation study that naively treating competing risks as independent right censoring events results in non-calibrated predictions, with the expected number of events overestimated. Discrimination performance is not affected by ignoring competing risks. Our proposed prediction methodologies correctly account for competing events, are very well calibrated, and easy to implement.

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Mesh:

Year:  2013        PMID: 23737081      PMCID: PMC3884047          DOI: 10.1007/s10985-013-9260-x

Source DB:  PubMed          Journal:  Lifetime Data Anal        ISSN: 1380-7870            Impact factor:   1.588


  13 in total

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3.  Prognostic models with competing risks: methods and application to coronary risk prediction.

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5.  Frailty Models for Familial Risk with Application to Breast Cancer.

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Journal:  J Am Stat Assoc       Date:  2013-12-01       Impact factor: 5.033

6.  Frailty-based competing risks model for multivariate survival data.

Authors:  Malka Gorfine; Li Hsu
Journal:  Biometrics       Date:  2010-08-05       Impact factor: 2.571

Review 7.  Familial breast cancer: collaborative reanalysis of individual data from 52 epidemiological studies including 58,209 women with breast cancer and 101,986 women without the disease.

Authors: 
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Authors:  Ewout W Steyerberg; Andrew J Vickers; Nancy R Cook; Thomas Gerds; Mithat Gonen; Nancy Obuchowski; Michael J Pencina; Michael W Kattan
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9.  Multiple diseases in carrier probability estimation: accounting for surviving all cancers other than breast and ovary in BRCAPRO.

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10.  Predicting the 30-year risk of cardiovascular disease: the framingham heart study.

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Journal:  Circulation       Date:  2009-06-08       Impact factor: 29.690

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Journal:  Genet Epidemiol       Date:  2020-06-07       Impact factor: 2.135

3.  Evaluating center performance in the competing risks setting: Application to outcomes of wait-listed end-stage renal disease patients.

Authors:  Sai H Dharmarajan; Douglas E Schaubel; Rajiv Saran
Journal:  Biometrics       Date:  2017-07-06       Impact factor: 2.571

4.  Hierarchical models for semi-competing risks data with application to quality of end-of-life care for pancreatic cancer.

Authors:  Kyu Ha Lee; Francesca Dominici; Deborah Schrag; Sebastien Haneuse
Journal:  J Am Stat Assoc       Date:  2016-10-18       Impact factor: 5.033

5.  Variation in cancer risk among families with genetic susceptibility.

Authors:  Theodore Huang; Danielle Braun; Henry T Lynch; Giovanni Parmigiani
Journal:  Genet Epidemiol       Date:  2020-10-08       Impact factor: 2.135

6.  A risk score for predicting atrial fibrillation in individuals with preclinical diastolic dysfunction: a retrospective study in a single large urban center in the United States.

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Journal:  BMC Cardiovasc Disord       Date:  2019-02-27       Impact factor: 2.298

7.  A competing risks model with binary time varying covariates for estimation of breast cancer risks in BRCA1 families.

Authors:  Yun-Hee Choi; Hae Jung; Saundra Buys; Mary Daly; Esther M John; John Hopper; Irene Andrulis; Mary Beth Terry; Laurent Briollais
Journal:  Stat Methods Med Res       Date:  2021-07-07       Impact factor: 3.021

  7 in total

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