| Literature DB >> 23734227 |
Griffin M Weber1, Isaac S Kohane.
Abstract
Evidence-based medicine employs expert opinion and clinical data to inform clinical decision making. The objective of this study is to determine whether it is possible to complement these sources of evidence with information about physician "group intelligence" that exists in electronic health records. Specifically, we measured laboratory test "repeat intervals", defined as the amount of time it takes for a physician to repeat a test that was previously ordered for the same patient. Our assumption is that while the result of a test is a direct measure of one marker of a patient's health, the physician's decision to order the test is based on multiple factors including past experience, available treatment options, and information about the patient that might not be coded in the electronic health record. By examining repeat intervals in aggregate over large numbers of patients, we show that it is possible to 1) determine what laboratory test results physicians consider "normal", 2) identify subpopulations of patients that deviate from the norm, and 3) identify situations where laboratory tests are over-ordered. We used laboratory tests as just one example of how physician group intelligence can be used to support evidence based medicine in a way that is automated and continually updated.Entities:
Mesh:
Year: 2013 PMID: 23734227 PMCID: PMC3666978 DOI: 10.1371/journal.pone.0064933
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Summary of repeat intervals for 97 laboratory tests.
| Laboratory Test (LOINC Name) | LOINC Code | Median Repeat Interval | Min Bin Median Repeat Interval | Max Bin Median Repeat Interval | Ratio Bin Median Repeat Interval | StDev Repeat Interval | Entropy | Category |
| pH SerPl-sCnc | 2753-2 | 0.121 | 0.059 | 0.150 | 2.541 | 111.8 | 0.722 | BGB |
| Base Excess BldA-sCnc | 1925-7 | 0.122 | 0.078 | 0.176 | 2.248 | 144.1 | 0.881 | BG |
| O2 Satn from pO2 Fr Bld | 2713-6 | 0.123 | 0.065 | 0.176 | 2.691 | 135.6 | 0.881 | BGB |
| pO2 Bld Qn | 11556-8 | 0.124 | 0.027 | 0.168 | 6.205 | 117.4 | 0.811 | BGB |
| pCO2 Bld Qn | 11557-6 | 0.124 | 0.063 | 0.150 | 2.400 | 127.5 | 0.610 | BGB |
| Inhaled O2 rate | 3151-8 | 0.136 | 0.059 | 0.235 | 3.976 | 43.0 | 1.279 | GB |
| Ca-I Bld-sCnc | 1994-3 | 0.157 | 0.082 | 0.169 | 2.068 | 156.8 | 0.286 | BGB |
| HCO3 Bld-sCnc | 1959-6 | 0.208 | 0.118 | 0.253 | 2.147 | 76.8 | 0.881 | BG |
| Ca-I SerPl-sCnc | 1995-0 | 0.218 | 0.167 | 0.258 | 1.550 | 169.2 | 0.722 | BG |
| Gentamicin SerPl-mCnc | 35668-3 | 0.379 | 0.076 | 2.418 | 31.945 | 199.4 | 1.915 | BG |
| CK MB SerPl EIA-cCnc | 6773-6 | 0.402 | 0.342 | 0.472 | 1.379 | 368.9 | 0.971 | BGB |
| CK/CK MB SerPl-cRto | 2158-4 | 0.424 | 0.383 | 0.463 | 1.208 | 337.7 | 0.934 | GBGB |
| Osmolality SerPl Qn | 2692-2 | 0.444 | 0.278 | 0.850 | 3.060 | 269.4 | 1.458 | GB |
| Troponin T SerPl-mCnc | 6598-7 | 0.485 | 0.440 | 0.539 | 1.224 | 116.6 | 0.000 | BG |
| CK SerPl-cCnc | 2157-6 | 0.642 | 0.424 | 1.017 | 2.402 | 400.8 | 0.881 | GB |
| Troponin I SerPl-mCnc | 10839-9 | 0.741 | 0.439 | 19.857 | 45.244 | 284.7 | 1.882 | GB |
| aPTT Plas Qn | 5898-2 | 0.927 | 0.378 | 1.270 | 3.356 | 346.7 | 1.141 | GB |
| Potassium SerPl-sCnc | 2823-3 | 0.958 | 0.444 | 0.987 | 2.224 | 291.7 | 0.286 | BGB |
| Vancomycin SerPl-mCnc | 20578-1 | 0.974 | 0.144 | 1.519 | 10.519 | 174.3 | 0.848 | BG |
| Magnesium SerPl-sCnc | 11554-3 | 0.977 | 0.483 | 1.042 | 2.157 | 284.7 | 0.286 | GB |
| CO2 SerPl-sCnc | 2028-9 | 0.988 | 0.408 | 1.144 | 2.801 | 311.5 | 0.748 | BGB |
| Glucose SerPl-mCnc | 6777-7 | 0.996 | 0.292 | 24.978 | 85.437 | 332.3 | 2.528 | GB |
| Sodium SerPl-sCnc | 2951-2 | 0.997 | 0.426 | 1.846 | 4.329 | 310.6 | 0.748 | BGB |
| Anion Gap3 SerPl-sCnc | 10466-1 | 1.000 | 0.829 | 1.015 | 1.224 | 307.1 | 0.000 | BGB |
| Hgb Bld-mCnc | 718-7 | 1.010 | 0.391 | 33.962 | 86.865 | 324.8 | 2.461 | BG |
| Hct Fr Bld Auto | 4544-3 | 1.026 | 0.490 | 40.188 | 81.970 | 336.9 | 2.595 | BG |
| PT PPP Qn | 5902-2 | 1.035 | 0.974 | 3.119 | 3.202 | 332.6 | 1.054 | GBG |
| Chloride SerPl-sCnc | 2075-0 | 1.049 | 0.600 | 1.876 | 3.127 | 330.5 | 0.748 | BGB |
| INR PPP Qn | 6301-6 | 1.053 | 0.982 | 6.998 | 7.127 | 235.8 | 1.154 | GBG |
| BUN SerPl-mCnc | 3094-0 | 1.068 | 0.722 | 2.994 | 4.145 | 338.5 | 1.439 | BGB |
| Creat SerPl-mCnc | 2160-0 | 1.090 | 0.892 | 2.193 | 2.460 | 333.4 | 0.993 | BGB |
| RDW RBC Auto-Rto | 788-0 | 1.103 | 0.987 | 42.922 | 43.495 | 337.1 | 1.871 | GB |
| MCH RBC Qn Auto | 785-6 | 1.204 | 1.052 | 2.788 | 2.650 | 351.9 | 0.992 | GBG |
| MCV RBC Qn Auto | 787-2 | 1.205 | 1.052 | 2.754 | 2.618 | 347.8 | 1.076 | GBG |
| WBC # Bld Auto | 6690-2 | 1.213 | 0.769 | 15.403 | 20.037 | 351.6 | 1.923 | BGB |
| Phenytoin SerPl-mCnc | 3968-5 | 1.217 | 1.122 | 1.944 | 1.733 | 201.3 | 0.610 | GBGB |
| RBC # Bld Auto | 789-8 | 1.217 | 0.796 | 43.963 | 55.242 | 347.5 | 2.361 | BG |
| Platelet # Bld Auto | 777-3 | 1.225 | 0.735 | 7.033 | 9.573 | 349.8 | 2.009 | BGB |
| MCHC RBC Auto-mCnc | 786-4 | 1.231 | 1.040 | 2.024 | 1.947 | 355.6 | 0.993 | BGB |
| Calcium SerPl-sCnc | 2000-8 | 1.644 | 0.736 | 35.068 | 47.640 | 390.6 | 2.458 | BG |
| Digoxin SerPl-mCnc | 10535-3 | 1.960 | 1.001 | 3.143 | 3.139 | 263.6 | 1.157 | GB |
| Phosphate SerPl-mCnc | 2777-1 | 1.965 | 1.003 | 5.594 | 5.574 | 384.3 | 1.971 | BGB |
| Lipase SerPl-cCnc | 3040-3 | 1.974 | 0.999 | 5.031 | 5.038 | 427.1 | 1.839 | BGB |
| Metamyelocytes Fr Bld Manual | 740-1 | 2.426 | 1.053 | 4.111 | 3.902 | 289.6 | 1.720 | GB |
| Amylase SerPl-cCnc | 1798-8 | 2.446 | 0.989 | 10.447 | 10.564 | 529.3 | 2.204 | BGB |
| Myelocytes Fr Bld Manual | 749-2 | 2.456 | 1.043 | 4.278 | 4.101 | 277.0 | 1.720 | GB |
| Neuts Seg Fr Bld Manual | 769-0 | 2.673 | 1.067 | 5.905 | 5.536 | 365.7 | 2.195 | BGB |
| Monocytes Fr Bld Manual | 744-3 | 2.760 | 1.092 | 4.041 | 3.699 | 358.7 | 1.788 | BGB |
| Basophils Fr Bld Manual | 707-0 | 2.776 | 2.021 | 6.968 | 3.448 | 359.8 | 1.076 | BG |
| Lymphocytes Fr Bld Manual | 737-7 | 2.790 | 1.060 | 11.269 | 10.627 | 390.8 | 2.409 | BGB |
| Eosinophil Fr Bld Manual | 714-6 | 2.846 | 1.886 | 5.990 | 3.176 | 367.6 | 1.713 | BG |
| Neuts Band # Bld Manual | 763-3 | 2.924 | 1.028 | 8.065 | 7.842 | 172.1 | 2.285 | GB |
| Estradiol SerPl-mCnc | 2243-4 | 2.988 | 1.051 | 13.929 | 13.248 | 232.2 | 1.981 | GBG |
| Atypical Lymphs Fr Bld Manual | 735-1 | 3.040 | 2.123 | 5.901 | 2.780 | 416.0 | 1.739 | BG |
| Neuts Band Fr Bld Manual | 764-1 | 3.894 | 1.020 | 42.122 | 41.291 | 396.5 | 2.771 | GBGB |
| Cyclosporin Bld-mCnc | 3520-4 | 5.970 | 2.974 | 11.236 | 3.778 | 92.6 | 1.533 | GB |
| LDH SerPl-cCnc | 2532-0 | 8.132 | 1.031 | 33.894 | 32.889 | 368.5 | 2.984 | BGB |
| HCG SerPl-sCnc | 2119-6 | 8.895 | 2.992 | 276.063 | 92.256 | 531.9 | 2.704 | GBG |
| Globulin Ser-mCnc | 2336-6 | 10.912 | 1.037 | 28.033 | 27.038 | 458.4 | 2.409 | BGB |
| Prot SerPl-mCnc | 2885-2 | 15.105 | 0.982 | 102.826 | 104.717 | 448.8 | 2.566 | BG |
| Retics/100 RBC Fr | 4679-7 | 17.717 | 6.372 | 41.006 | 6.436 | 516.0 | 2.522 | BGB |
| Bilirub SerPl-mCnc | 1975-2 | 19.547 | 0.956 | 47.202 | 49.362 | 442.4 | 2.458 | GB |
| Urate SerPl-mCnc | 3084-1 | 20.169 | 1.050 | 44.928 | 42.789 | 415.0 | 2.823 | BGB |
| Albumin SerPl-mCnc | 1751-7 | 20.757 | 1.118 | 128.127 | 114.598 | 444.0 | 3.141 | BG |
| ALP SerPl-cCnc | 6768-6 | 27.978 | 1.289 | 70.348 | 54.580 | 443.2 | 2.561 | GB |
| Basophils Fr Bld Auto | 706-2 | 28.043 | 2.110 | 52.266 | 24.774 | 410.5 | 2.804 | BGB |
| Eosinophil Fr Bld Auto | 713-8 | 28.081 | 2.555 | 52.915 | 20.711 | 410.3 | 2.522 | BGB |
| ALT SerPl-cCnc | 1742-6 | 28.414 | 1.110 | 58.151 | 52.369 | 430.1 | 2.361 | BGB |
| Eosinophil # Bld Auto | 711-2 | 28.920 | 2.501 | 60.021 | 24.002 | 409.5 | 2.746 | BGB |
| Basophils # Bld Auto | 704-7 | 29.528 | 4.877 | 52.957 | 10.858 | 411.1 | 2.571 | BGB |
| AST SerPl-cCnc | 1920-8 | 30.291 | 1.055 | 78.035 | 73.977 | 431.8 | 2.461 | BGB |
| Monocytes Fr Bld Auto | 5905-5 | 34.410 | 5.740 | 56.119 | 9.776 | 464.5 | 2.384 | BGB |
| Neutrophils Fr Bld Auto | 770-8 | 34.686 | 1.885 | 92.702 | 49.168 | 468.3 | 3.141 | GB |
| Lymphocytes Fr Bld Auto | 736-9 | 34.826 | 1.797 | 114.231 | 63.560 | 464.9 | 2.946 | BG |
| Neutrophils # Bld Auto | 752-6 | 34.932 | 1.768 | 75.975 | 42.971 | 457.9 | 2.461 | BGB |
| Monocytes # Bld Auto | 742-7 | 35.744 | 3.636 | 83.958 | 23.090 | 470.4 | 2.358 | BGB |
| Lymphocytes # Bld Auto | 731-0 | 37.134 | 1.963 | 99.138 | 50.498 | 462.7 | 2.622 | BG |
| PMV Bld Qn | 28542-9 | 37.998 | 10.019 | 67.001 | 6.687 | 254.6 | 2.119 | BGB |
| Sp Gr Ur Qn Strip | 5811-5 | 49.284 | 33.625 | 81.578 | 2.426 | 581.0 | 1.782 | GBGB |
| RBC # UrnS HPF | 5808-1 | 49.988 | 12.815 | 83.504 | 6.516 | 619.8 | 2.115 | GB |
| pH Ur Strip-sCnc | 5803-2 | 51.020 | 36.494 | 70.001 | 1.918 | 594.1 | 1.295 | BGB |
| Trigl SerPl-mCnc | 2571-8 | 108.380 | 42.058 | 225.953 | 5.372 | 498.3 | 2.121 | GB |
| ESR Bld Qn Westrgrn | 4537-7 | 125.983 | 21.147 | 246.166 | 11.641 | 672.5 | 2.085 | GB |
| Cholest SerPl-mCnc | 2093-3 | 127.327 | 1.059 | 204.759 | 193.346 | 503.5 | 1.933 | BGB |
| Hgb A1c Fr Bld | 4548-4 | 132.945 | 113.022 | 216.175 | 1.913 | 328.8 | 1.076 | GB |
| Mean Glucose Bld gHb Est-mCnc | 27353-2 | 137.837 | 120.280 | 266.906 | 2.219 | 325.6 | 1.076 | GB |
| Ferritin SerPl-mCnc | 2276-4 | 151.261 | 34.569 | 213.974 | 6.190 | 622.9 | 1.457 | GB |
| T4 SerPl-mCnc | 3026-2 | 154.974 | 47.040 | 202.118 | 4.297 | 629.6 | 1.357 | BGB |
| Iron SerPl-mCnc | 2498-4 | 160.883 | 83.993 | 266.211 | 3.169 | 628.1 | 1.846 | BGB |
| TIBC SerPl-mCnc | 2500-7 | 166.066 | 27.024 | 248.118 | 9.182 | 649.0 | 1.717 | BG |
| TSH SerPl-aCnc | 3016-3 | 232.133 | 55.991 | 368.103 | 6.574 | 578.2 | 1.579 | BGB |
| Cholest/HDLc SerPl-mRto | 9830-1 | 247.117 | 131.251 | 367.034 | 2.796 | 348.0 | 1.234 | GB |
| VLDLc SerPl-mCnc | 2092-5 | 253.763 | 175.665 | 363.871 | 2.071 | 563.9 | 0.993 | GB |
| B-LP SerPl Calc-sCnc | 14815-5 | 264.197 | 166.951 | 346.086 | 2.073 | 578.8 | 0.881 | BGB |
| LDLc SerPl-mCnc | 2090-9 | 273.672 | 172.881 | 343.069 | 1.984 | 517.4 | 0.881 | BGB |
| HDLc SerPl-mCnc | 2086-7 | 276.331 | 146.957 | 370.070 | 2.518 | 528.6 | 1.188 | BG |
| PSA SerPl-mCnc | 2857-1 | 350.024 | 75.940 | 380.037 | 5.004 | 392.9 | 1.076 | BGB |
Listed for each test are the LOINC (Logical Observation Identifiers Names and Code) name and code; the median repeat interval and standard deviation for all 100,000 repeat intervals; the minimum and maximum median repeat intervals of the 20 value bins and their ratio; the entropy; and the category: “bad-good” (BG), “bad-good-bad” (BGB), “good-bad” (GB), “good-bad-good” (GBG), and “good-bad-good-bad” (GBGB). Repeat intervals are given in days.
Entropy time periods.
| Time Period | Description | Start (Days) | Peak (Days) |
| 1 | 2 hours | 0.000 | 0.093 |
| 2 | 4 hours | 0.103 | 0.170 |
| 3 | 8 hours | 0.188 | 0.342 |
| 4 | 12 hours | 0.418 | 0.510 |
| 5 | 24 hours | 0.624 | 1.028 |
| 6 | 2 days | 1.533 | 2.070 |
| 7 | 3 days | 2.528 | 3.088 |
| 8 | 4 days | 3.413 | 4.169 |
| 9 | 7 days | 5.627 | 6.873 |
| 10 | 2 weeks | 10.253 | 13.840 |
| 11 | 3 weeks | 16.905 | 20.648 |
| 12 | 4 weeks | 25.219 | 27.872 |
| 13 | 5 weeks | 30.803 | 34.042 |
| 14 | 6 weeks | 37.622 | 41.579 |
| 15 | 2 months | 45.952 | 62.029 |
| 16 | 3 months | 75.763 | 92.536 |
| 17 | 4 months | 113.024 | 124.911 |
| 18 | 6 months | 152.567 | 186.345 |
| 19 | 1 year | 251.540 | 375.253 |
| 20 | 2 years | 683.756 | 755.667 |
Listed are the start of each time period and the most common repeat interval (peak).
Figure 1Repeat intervals for 97 common laboratory tests.
(a) Frequency distribution of repeat intervals for all labs. Vertical bars indicate the boundaries used in the entropy calculations to convert repeat intervals to one of 20 discrete categories. (b) Median repeat interval for each of 97 tests. Vertical bars indicate the 25th and 75th percentiles.
Figure 2The median repeat interval for different initial (a) WBC, (b) HDLc, (c) HbA1c, and (d) hCG values.
Error bars represent the 25th and 75th percentiles. Triangles indicate reference values for BWH (black) and MGH (gray).
Figure 3Factors that affect repeat interval, including (a) age and (b) inpatient vs outpatient setting.
Error bars represent the 25th and 75th percentiles.