Literature DB >> 23732863

Extending the distance range accessed with continuous wave EPR with Gd3+ spin probes at high magnetic fields.

Devin T Edwards1, Zhidong Ma, Thomas J Meade, Daniella Goldfarb, Songi Han, Mark S Sherwin.   

Abstract

Interspin distances between 0.8 nm and 2.0 nm can be measured through the dipolar broadening of the continuous wave (cw) EPR spectrum of nitroxide spin labels at X-band (9.4 GHz, 0.35 T). We introduce Gd(3+) as a promising alternative spin label for distance measurements by cw EPR above 7 Tesla, where the |-1/2〉 to |1/2〉 transition narrows below 1 mT and becomes extremely sensitive to dipolar broadening. To estimate the distance limits of cw EPR with Gd(3+), we have measured spectra of frozen solutions of GdCl3 at 8.6 T (240 GHz) and 10 K at concentrations ranging from 50 mM to 0.1 mM, covering a range of average interspin distances. These experiments show substantial dipolar broadening at distances where line broadening cannot be observed with nitroxides at X-band. This data, and its agreement with calculated dipolar-broadened lineshapes, show Gd(3+) to be sensitive to distances as long as ∼3.8 nm. Further, the linewidth of a bis-Gd(3+) complex with a flexible ∼1.6 nm bridge is strongly broadened as compared to the mono-Gd(3+) complex, demonstrating the potential for application to pairwise distances. Gd-DOTA-based chelates that can be functionalized to protein surfaces display linewidths narrower than aqueous GdCl3, implying they should be even more sensitive to dipolar broadening. Therefore, we suggest that the combination of tailored Gd(3+) labels and high magnetic fields can extend the longest interspin distances measurable by cw EPR from 2.0 nm to 3.8 nm. cw EPR data at 260 K demonstrate that the line broadening remains clear out to similar average interspin distances, offering Gd(3+) probes as promising distance rulers at temperatures higher than possible with conventional pulsed EPR distance measurements.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23732863      PMCID: PMC4142211          DOI: 10.1039/c3cp43787f

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  42 in total

1.  Dead-time free measurement of dipole-dipole interactions between electron spins.

Authors:  M Pannier; S Veit; A Godt; G Jeschke; H W Spiess
Journal:  J Magn Reson       Date:  2000-02       Impact factor: 2.229

2.  Sensitivity enhancement in pulse EPR distance measurements.

Authors:  G Jeschke; A Bender; H Paulsen; H Zimmermann; A Godt
Journal:  J Magn Reson       Date:  2004-07       Impact factor: 2.229

Review 3.  The 'glass transition' in protein dynamics: what it is, why it occurs, and how to exploit it.

Authors:  Dagmar Ringe; Gregory A Petsko
Journal:  Biophys Chem       Date:  2003-09       Impact factor: 2.352

4.  Gadolinium tagging for high-precision measurements of 6 nm distances in protein assemblies by EPR.

Authors:  Hiromasa Yagi; Debamalya Banerjee; Bim Graham; Thomas Huber; Daniella Goldfarb; Gottfried Otting
Journal:  J Am Chem Soc       Date:  2011-06-16       Impact factor: 15.419

5.  Pulsed electron paramagnetic resonance spectroscopy powered by a free-electron laser.

Authors:  S Takahashi; L-C Brunel; D T Edwards; J van Tol; G Ramian; S Han; M S Sherwin
Journal:  Nature       Date:  2012-09-20       Impact factor: 49.962

6.  W-Band pulse EPR distance measurements in peptides using Gd(3+)-dipicolinic acid derivatives as spin labels.

Authors:  Michal Gordon-Grossman; Ilia Kaminker; Yana Gofman; Yechiel Shai; Daniella Goldfarb
Journal:  Phys Chem Chem Phys       Date:  2011-05-09       Impact factor: 3.676

7.  A high-frequency EPR study of frozen solutions of Gd(III) complexes: straightforward determination of the zero-field splitting parameters and simulation of the NMRD profiles.

Authors:  Meriem Benmelouka; Johan Van Tol; Alain Borel; Marc Port; Lothar Helm; Louis Claude Brunel; André E Merbach
Journal:  J Am Chem Soc       Date:  2006-06-21       Impact factor: 15.419

8.  Pulsed ESR dipolar spectroscopy for distance measurements in immobilized spin labeled proteins in liquid solution.

Authors:  Zhongyu Yang; Yangping Liu; Peter Borbat; Jay L Zweier; Jack H Freed; Wayne L Hubbell
Journal:  J Am Chem Soc       Date:  2012-06-11       Impact factor: 15.419

Review 9.  Long-range distance determinations in biomacromolecules by EPR spectroscopy.

Authors:  Olav Schiemann; Thomas F Prisner
Journal:  Q Rev Biophys       Date:  2007-06-13       Impact factor: 5.318

10.  Determination of the distance between two spin labels attached to a macromolecule.

Authors:  M D Rabenstein; Y K Shin
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-29       Impact factor: 11.205

View more
  5 in total

1.  Determining the Secondary Structure of Membrane Proteins and Peptides Via Electron Spin Echo Envelope Modulation (ESEEM) Spectroscopy.

Authors:  Lishan Liu; Daniel J Mayo; Indra D Sahu; Andy Zhou; Rongfu Zhang; Robert M McCarrick; Gary A Lorigan
Journal:  Methods Enzymol       Date:  2015-08-01       Impact factor: 1.600

2.  Photonic band-gap resonators for high-field/high-frequency EPR of microliter-volume liquid aqueous samples.

Authors:  Sergey Milikisiyants; Alexander A Nevzorov; Alex I Smirnov
Journal:  J Magn Reson       Date:  2018-09-20       Impact factor: 2.229

3.  Gd3+-Gd3+ distances exceeding 3 nm determined by very high frequency continuous wave electron paramagnetic resonance.

Authors:  Jessica A Clayton; Mian Qi; Adelheid Godt; Daniella Goldfarb; Songi Han; Mark S Sherwin
Journal:  Phys Chem Chem Phys       Date:  2017-02-15       Impact factor: 3.676

4.  Gd(iii) and Mn(ii) complexes for dynamic nuclear polarization: small molecular chelate polarizing agents and applications with site-directed spin labeling of proteins.

Authors:  Monu Kaushik; Thorsten Bahrenberg; Thach V Can; Marc A Caporini; Robert Silvers; Jörg Heiliger; Albert A Smith; Harald Schwalbe; Robert G Griffin; Björn Corzilius
Journal:  Phys Chem Chem Phys       Date:  2016-08-22       Impact factor: 3.676

5.  Quantitative analysis of zero-field splitting parameter distributions in Gd(iii) complexes.

Authors:  Jessica A Clayton; Katharina Keller; Mian Qi; Julia Wegner; Vanessa Koch; Henrik Hintz; Adelheid Godt; Songi Han; Gunnar Jeschke; Mark S Sherwin; Maxim Yulikov
Journal:  Phys Chem Chem Phys       Date:  2018-04-18       Impact factor: 3.676

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.