Literature DB >> 23695489

Simulation of platelets suspension flowing through a stenosis model using a dissipative particle dynamics approach.

Joao S Soares1, Chao Gao, Yared Alemu, Marvin Slepian, Danny Bluestein.   

Abstract

Stresses on blood cellular constituents induced by blood flow can be represented by a continuum approach down to the μm level; however, the molecular mechanisms of thrombosis and platelet activation and aggregation are on the order of nm. The coupling of the disparate length and time scales between molecular and macroscopic transport phenomena represents a major computational challenge. In order to bridge the gap between macroscopic flow scales and the cellular scales with the goal of depicting and predicting flow induced thrombogenicity, multi-scale approaches based on particle methods are better suited. We present a top-scale model to describe bulk flow of platelet suspensions: we employ dissipative particle dynamics to model viscous flow dynamics and present a novel and general no-slip boundary condition that allows the description of three-dimensional viscous flows through complex geometries. Dissipative phenomena associated with boundary layers and recirculation zones are observed and favorably compared to benchmark viscous flow solutions (Poiseuille and Couette flows). Platelets in suspension, modeled as coarse-grained finite-sized ensembles of bound particles constituting an enclosed deformable membrane with flat ellipsoid shape, show self-orbiting motions in shear flows consistent with Jeffery's orbits, and are transported with the flow, flipping and colliding with the walls and interacting with other platelets.

Entities:  

Mesh:

Year:  2013        PMID: 23695489      PMCID: PMC3781184          DOI: 10.1007/s10439-013-0829-z

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  30 in total

1.  Computational simulation of platelet deposition and activation: II. Results for Poiseuille flow over collagen.

Authors:  E N Sorensen; G W Burgreen; W R Wagner; J F Antaki
Journal:  Ann Biomed Eng       Date:  1999 Jul-Aug       Impact factor: 3.934

2.  Modeling fibrin aggregation in blood flow with discrete-particles.

Authors:  Krzysztof Boryczko; Witold Dzwinel; David A Yuen
Journal:  Comput Methods Programs Biomed       Date:  2004-09       Impact factor: 5.428

3.  A multiscale red blood cell model with accurate mechanics, rheology, and dynamics.

Authors:  Dmitry A Fedosov; Bruce Caswell; George Em Karniadakis
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

4.  Modeling the flow of dense suspensions of deformable particles in three dimensions.

Authors:  Michael M Dupin; Ian Halliday; Chris M Care; Lyuba Alboul; Lance L Munn
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-06-27

Review 5.  Mathematical modeling and computer simulation in blood coagulation.

Authors:  Fazoil I Ataullakhanov; Mikhail A Panteleev
Journal:  Pathophysiol Haemost Thromb       Date:  2005

6.  Time-dependent and outflow boundary conditions for Dissipative Particle Dynamics.

Authors:  Huan Lei; Dmitry A Fedosov; George Em Karniadakis
Journal:  J Comput Phys       Date:  2011-05-31       Impact factor: 3.553

Review 7.  Research approaches for studying flow-induced thromboembolic complications in blood recirculating devices.

Authors:  Danny Bluestein
Journal:  Expert Rev Med Devices       Date:  2004-09       Impact factor: 3.166

8.  Hydrodynamics from dissipative particle dynamics.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1995-08

9.  Predicting dynamics and rheology of blood flow: A comparative study of multiscale and low-dimensional models of red blood cells.

Authors:  Wenxiao Pan; Dmitry A Fedosov; Bruce Caswell; George Em Karniadakis
Journal:  Microvasc Res       Date:  2011-05-27       Impact factor: 3.514

Review 10.  Mechanisms involved in platelet procoagulant response.

Authors:  E M Bevers; P Comfurius; R F Zwaal
Journal:  Adv Exp Med Biol       Date:  1993       Impact factor: 2.622

View more
  16 in total

1.  A Multiple Time Stepping Algorithm for Efficient Multiscale Modeling of Platelets Flowing in Blood Plasma.

Authors:  Peng Zhang; Na Zhang; Yuefan Deng; Danny Bluestein
Journal:  J Comput Phys       Date:  2015-03-01       Impact factor: 3.553

2.  Mechanical platelet activation potential in abdominal aortic aneurysms.

Authors:  Kirk B Hansen; Amirhossein Arzani; Shawn C Shadden
Journal:  J Biomech Eng       Date:  2015-02-05       Impact factor: 2.097

3.  A multiscale biomechanical model of platelets: Correlating with in-vitro results.

Authors:  Peng Zhang; Li Zhang; Marvin J Slepian; Yuefan Deng; Danny Bluestein
Journal:  J Biomech       Date:  2016-11-11       Impact factor: 2.712

4.  Shear-mediated platelet activation in the free flow: Perspectives on the emerging spectrum of cell mechanobiological mechanisms mediating cardiovascular implant thrombosis.

Authors:  Marvin J Slepian; Jawaad Sheriff; Marcus Hutchinson; Phat Tran; Naing Bajaj; Joe G N Garcia; S Scott Saavedra; Danny Bluestein
Journal:  J Biomech       Date:  2016-11-10       Impact factor: 2.712

5.  Numerical simulation of a single cell passing through a narrow slit.

Authors:  L L Xiao; Y Liu; S Chen; B M Fu
Journal:  Biomech Model Mechanobiol       Date:  2016-04-15

6.  Sub-cellular modeling of platelet transport in blood flow through microchannels with constriction.

Authors:  Alireza Yazdani; George Em Karniadakis
Journal:  Soft Matter       Date:  2016-05-11       Impact factor: 3.679

7.  Multiscale Particle-Based Modeling of Flowing Platelets in Blood Plasma Using Dissipative Particle Dynamics and Coarse Grained Molecular Dynamics.

Authors:  Peng Zhang; Chao Gao; Na Zhang; Marvin J Slepian; Yuefan Deng; Danny Bluestein
Journal:  Cell Mol Bioeng       Date:  2014-12-01       Impact factor: 2.321

8.  Quantifying Platelet Margination in Diabetic Blood Flow.

Authors:  Hung-Yu Chang; Alireza Yazdani; Xuejin Li; Konstantinos A A Douglas; Christos S Mantzoros; George Em Karniadakis
Journal:  Biophys J       Date:  2018-08-30       Impact factor: 4.033

9.  A predictive multiscale model for simulating flow-induced platelet activation: Correlating in silico results with in vitro results.

Authors:  Peng Zhang; Jawaad Sheriff; Shmuel Einav; Marvin J Slepian; Yuefan Deng; Danny Bluestein
Journal:  J Biomech       Date:  2021-01-25       Impact factor: 2.712

10.  A Multiscale Model for Recruitment Aggregation of Platelets by Correlating with In Vitro Results.

Authors:  Prachi Gupta; Peng Zhang; Jawaad Sheriff; Danny Bluestein; Yuefan Deng
Journal:  Cell Mol Bioeng       Date:  2019-07-09       Impact factor: 2.321

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.