Literature DB >> 33529943

A predictive multiscale model for simulating flow-induced platelet activation: Correlating in silico results with in vitro results.

Peng Zhang1, Jawaad Sheriff2, Shmuel Einav2, Marvin J Slepian3, Yuefan Deng4, Danny Bluestein5.   

Abstract

Flow-induced platelet activation prompts complex filopodial formation. Continuum methods fail to capture such molecular-scale mechanisms. A multiscale numerical model was developed to simulate this activation process, where a Dissipative Particle Dynamics (DPD) model of viscous blood flow is interfaced with a Coarse Grained Molecular Dynamics (CGMD) platelet model. Embedded in DPD blood flow, the macroscopic dynamic stresses are interactively transferred to the CGMD model, inducing intra-platelet associated events. The platelets activate by a biomechanical transductive linkage chain and dynamically change their shape in response. The models are fully coupled via a hybrid-potential interface and multiple time-stepping (MTS) schemes for handling the disparity between the spatiotemporal scales. Cumulative hemodynamic stresses that may lead to platelet activation are mapped on the surface membrane and simultaneously transmitted to the cytoplasm and cytoskeleton. Upon activation, the flowing platelets lose their quiescent discoid shape and evolve by forming filopodia. The model predictions were validated by a set of in vitro experiments, Platelets were exposed to various combinations of shear stresses and durations in our programmable hemodynamic shearing device (HSD). Their shape change was measured at multiple time points using scanning electron microscopy (SEM). The CGMD model parameters were fine-tuned by interrogating a parameter space established in these experiments. Segmentation of the SEM imaging streams was conducted by a deep machine learning system. This model can be further employed to simulate shear mediated platelet activation thrombosis initiation and to study the effects of modulating platelet properties to enhance their shear resistance via mechanotransduction pathways.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Filopodia formation; Mechanical transduction; Multiscale simulations; Platelet activation

Mesh:

Year:  2021        PMID: 33529943      PMCID: PMC8590631          DOI: 10.1016/j.jbiomech.2021.110275

Source DB:  PubMed          Journal:  J Biomech        ISSN: 0021-9290            Impact factor:   2.712


  33 in total

1.  Platelet shape changes and adhesion under high shear flow.

Authors:  Mitsuhiro Kuwahara; Mitsuhiko Sugimoto; Shizuko Tsuji; Hideto Matsui; Tomohiro Mizuno; Shigeki Miyata; Akira Yoshioka
Journal:  Arterioscler Thromb Vasc Biol       Date:  2002-02-01       Impact factor: 8.311

2.  Platelet morphologic changes and fibrinogen receptor localization. Initial responses in ADP-activated human platelets.

Authors:  M E Hensler; M Frojmovic; R G Taylor; R R Hantgan; J C Lewis
Journal:  Am J Pathol       Date:  1992-09       Impact factor: 4.307

3.  Particle-based methods for multiscale modeling of blood flow in the circulation and in devices: challenges and future directions. Sixth International Bio-Fluid Mechanics Symposium and Workshop March 28-30, 2008 Pasadena, California.

Authors:  Takami Yamaguchi; Takuji Ishikawa; Y Imai; N Matsuki; Mikhail Xenos; Yuefan Deng; Danny Bluestein
Journal:  Ann Biomed Eng       Date:  2010-03       Impact factor: 3.934

4.  Visualization of microtubule growth in living platelets reveals a dynamic marginal band with multiple microtubules.

Authors:  Sunita Patel-Hett; Jennifer L Richardson; Harald Schulze; Ksenija Drabek; Natasha A Isaac; Karin Hoffmeister; Ramesh A Shivdasani; J Chloë Bulinski; Niels Galjart; John H Hartwig; Joseph E Italiano
Journal:  Blood       Date:  2008-01-29       Impact factor: 22.113

Review 5.  Plasma viscosity: a forgotten variable.

Authors:  Gábor Késmárky; Péter Kenyeres; Miklós Rábai; Kálmán Tóth
Journal:  Clin Hemorheol Microcirc       Date:  2008       Impact factor: 2.375

6.  Multiscale Particle-Based Modeling of Flowing Platelets in Blood Plasma Using Dissipative Particle Dynamics and Coarse Grained Molecular Dynamics.

Authors:  Peng Zhang; Chao Gao; Na Zhang; Marvin J Slepian; Yuefan Deng; Danny Bluestein
Journal:  Cell Mol Bioeng       Date:  2014-12-01       Impact factor: 2.321

Review 7.  Actin, a central player in cell shape and movement.

Authors:  Thomas D Pollard; John A Cooper
Journal:  Science       Date:  2009-11-27       Impact factor: 47.728

8.  The cytoskeleton of the resting human blood platelet: structure of the membrane skeleton and its attachment to actin filaments.

Authors:  J H Hartwig; M DeSisto
Journal:  J Cell Biol       Date:  1991-02       Impact factor: 10.539

9.  Activation induced morphological changes and integrin αIIbβ3 activity of living platelets.

Authors:  Sandra Posch; Isabel Neundlinger; Michael Leitner; Peter Siostrzonek; Simon Panzer; Peter Hinterdorfer; Andreas Ebner
Journal:  Methods       Date:  2013-04-06       Impact factor: 3.608

10.  Routine Access to Millisecond Time Scale Events with Accelerated Molecular Dynamics.

Authors:  Levi C T Pierce; Romelia Salomon-Ferrer; Cesar Augusto F de Oliveira; J Andrew McCammon; Ross C Walker
Journal:  J Chem Theory Comput       Date:  2012-07-27       Impact factor: 6.006

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  4 in total

1.  In Vitro Measurements of Shear-Mediated Platelet Adhesion Kinematics as Analyzed through Machine Learning.

Authors:  Jawaad Sheriff; Peineng Wang; Peng Zhang; Ziji Zhang; Yuefan Deng; Danny Bluestein
Journal:  Ann Biomed Eng       Date:  2021-05-10       Impact factor: 3.934

2.  Models of Shear-Induced Platelet Activation and Numerical Implementation With Computational Fluid Dynamics Approaches.

Authors:  Dong Han; Jiafeng Zhang; Bartley P Griffith; Zhongjun J Wu
Journal:  J Biomech Eng       Date:  2022-04-01       Impact factor: 2.097

3.  An Accelerated Thrombosis Model for Computational Fluid Dynamics Simulations in Rotary Blood Pumps.

Authors:  Christopher Blum; Sascha Groß-Hardt; Ulrich Steinseifer; Michael Neidlin
Journal:  Cardiovasc Eng Technol       Date:  2022-01-14       Impact factor: 2.305

4.  A fibrin enhanced thrombosis model for medical devices operating at low shear regimes or large surface areas.

Authors:  Rodrigo Méndez Rojano; Angela Lai; Mansur Zhussupbekov; Greg W Burgreen; Keith Cook; James F Antaki
Journal:  PLoS Comput Biol       Date:  2022-10-03       Impact factor: 4.779

  4 in total

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