Literature DB >> 23695317

Fourier-Bessel rotational invariant eigenimages.

Zhizhen Zhao1, Amit Singer.   

Abstract

We present an efficient and accurate algorithm for principal component analysis (PCA) of a large set of two-dimensional images and, for each image, the set of its uniform rotations in the plane and its reflection. The algorithm starts by expanding each image, originally given on a Cartesian grid, in the Fourier-Bessel basis for the disk. Because the images are essentially band limited in the Fourier domain, we use a sampling criterion to truncate the Fourier-Bessel expansion such that the maximum amount of information is preserved without the effect of aliasing. The constructed covariance matrix is invariant to rotation and reflection and has a special block diagonal structure. PCA is efficiently done for each block separately. This Fourier-Bessel-based PCA detects more meaningful eigenimages and has improved denoising capability compared to traditional PCA for a finite number of noisy images.

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Mesh:

Year:  2013        PMID: 23695317      PMCID: PMC3711886          DOI: 10.1364/JOSAA.30.000871

Source DB:  PubMed          Journal:  J Opt Soc Am A Opt Image Sci Vis        ISSN: 1084-7529            Impact factor:   2.129


  7 in total

1.  Image quality assessment: from error visibility to structural similarity.

Authors:  Zhou Wang; Alan Conrad Bovik; Hamid Rahim Sheikh; Eero P Simoncelli
Journal:  IEEE Trans Image Process       Date:  2004-04       Impact factor: 10.856

2.  Optimal approximation of uniformly rotated images: relationship between Karhunen-Loeve expansion and discrete cosine transform.

Authors:  M Uenohara; T Kanade
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

3.  Karhunen-Loéve expansion of a set of rotated templates.

Authors:  Matjaz Jogan; Emil Zagar; Ales Leonardis
Journal:  IEEE Trans Image Process       Date:  2003       Impact factor: 10.856

4.  Two-Dimensional Tomography from Noisy Projections Taken at Unknown Random Directions.

Authors:  A Singer; H-T Wu
Journal:  SIAM J Imaging Sci       Date:  2013-01-01       Impact factor: 2.867

5.  Use of multivariate statistics in analysing the images of biological macromolecules.

Authors:  M van Heel; J Frank
Journal:  Ultramicroscopy       Date:  1981       Impact factor: 2.689

6.  The reconstruction of structure from electron micrographs of randomly oriented particles.

Authors:  Z Kam
Journal:  J Theor Biol       Date:  1980-01-07       Impact factor: 2.691

7.  Computing steerable principal components of a large set of images and their rotations.

Authors:  Colin Ponce; Amit Singer
Journal:  IEEE Trans Image Process       Date:  2011-05-02       Impact factor: 10.856

  7 in total
  9 in total

1.  Orientation Determination of Cryo-EM Images Using Least Unsquared Deviations.

Authors:  Lanhui Wang; Amit Singer; Zaiwen Wen
Journal:  SIAM J Imaging Sci       Date:  2013-12-03       Impact factor: 2.867

2.  Steerable Principal Components for Space-Frequency Localized Images.

Authors:  Boris Landa; Yoel Shkolnisky
Journal:  SIAM J Imaging Sci       Date:  2017-04-13       Impact factor: 2.867

3.  Rotationally invariant image representation for viewing direction classification in cryo-EM.

Authors:  Zhizhen Zhao; Amit Singer
Journal:  J Struct Biol       Date:  2014-03-12       Impact factor: 2.867

4.  Covariance Matrix Estimation for the Cryo-EM Heterogeneity Problem.

Authors:  E Katsevich; A Katsevich; A Singer
Journal:  SIAM J Imaging Sci       Date:  2015-01-22       Impact factor: 2.867

5.  Super-resolution multi-reference alignment.

Authors:  Tamir Bendory; Ariel Jaffe; William Leeb; Nir Sharon; Amit Singer
Journal:  Inf inference       Date:  2021-02-18

6.  An approximate expectation-maximization for two-dimensional multi-target detection.

Authors:  Shay Kreymer; Amit Singer; Tamir Bendory
Journal:  IEEE Signal Process Lett       Date:  2022-04-13       Impact factor: 3.201

7.  Fast Steerable Principal Component Analysis.

Authors:  Zhizhen Zhao; Yoel Shkolnisky; Amit Singer
Journal:  IEEE Trans Comput Imaging       Date:  2016-01-18

8.  Removal of Vesicle Structures From Transmission Electron Microscope Images.

Authors:  Katrine Hommelhoff Jensen; Fred J Sigworth; Sami Sebastian Brandt
Journal:  IEEE Trans Image Process       Date:  2015-12-03       Impact factor: 10.856

9.  Orthogonal Matrix Retrieval In Cryo-Electron Microscopy.

Authors:  Tejal Bhamre; Teng Zhang; Amit Singer
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2015-04
  9 in total

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