Literature DB >> 23666335

Characterization of a novel dye-decolorizing peroxidase (DyP)-type enzyme from Irpex lacteus and its application in enzymatic hydrolysis of wheat straw.

Davinia Salvachúa1, Alicia Prieto, Ángel T Martínez, María Jesús Martínez.   

Abstract

Irpex lacteus is a white rot basidiomycete proposed for a wide spectrum of biotechnological applications which presents an interesting, but still scarcely known, enzymatic oxidative system. Among these enzymes, the production, purification, and identification of a new dye-decolorizing peroxidase (DyP)-type enzyme, as well as its physico-chemical, spectroscopic, and catalytic properties, are described in the current work. According to its N-terminal sequence and peptide mass fingerprinting analyses, I. lacteus DyP showed high homology (>95%) with the hypothetical (not isolated or characterized) protein cpop21 from an unidentified species of the family Polyporaceae. The enzyme had a low optimal pH, was very stable to acid pH and temperature, and showed improved activity and stability at high H2O2 concentrations compared to other peroxidases. Other attractive features of I. lacteus DyP were its high catalytic efficiency oxidizing the recalcitrant anthraquinone and azo dyes assayed (kcat/Km of 1.6 × 10(6) s(-1) M(-1)) and its ability to oxidize nonphenolic aromatic compounds like veratryl alcohol. In addition, the effect of this DyP during the enzymatic hydrolysis of wheat straw was checked. The results suggest that I. lacteus DyP displayed a synergistic action with cellulases during the hydrolysis of wheat straw, increasing significantly the fermentable glucose recoveries from this substrate. These data show a promising biotechnological potential for this enzyme.

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Year:  2013        PMID: 23666335      PMCID: PMC3697495          DOI: 10.1128/AEM.00699-13

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  36 in total

1.  The role of enzymes produced by white-rot fungus Irpex lacteus in the decolorization of the textile industry effluent.

Authors:  Kwang-Soo Shin
Journal:  J Microbiol       Date:  2004-03       Impact factor: 3.422

2.  Purification and characterization of two DyP isozymes from Thanatephorus cucumeris Dec 1 specifically expressed in an air-membrane surface bioreactor.

Authors:  Takuya Shimokawa; Makoto Shoda; Yasushi Sugano
Journal:  J Biosci Bioeng       Date:  2009-02       Impact factor: 2.894

3.  The catalytic mechanism of dye-decolorizing peroxidase DyP may require the swinging movement of an aspartic acid residue.

Authors:  Toru Yoshida; Hideaki Tsuge; Hiroki Konno; Toru Hisabori; Yasushi Sugano
Journal:  FEBS J       Date:  2011-05-31       Impact factor: 5.542

4.  Expression on wood, molecular cloning and characterization of three lignin peroxidase (LiP) encoding genes of the white rot fungus Phlebia radiata.

Authors:  Kristiina S Hildén; Miia R Mäkelä; Terhi K Hakala; Annele Hatakka; Taina Lundell
Journal:  Curr Genet       Date:  2005-12-07       Impact factor: 3.886

5.  Manganese peroxidase isoenzymes produced by Pleurotus ostreatus grown on wood sawdust.

Authors:  P Giardina; G Palmieri; B Fontanella; V Rivieccio; G Sannia
Journal:  Arch Biochem Biophys       Date:  2000-04-01       Impact factor: 4.013

Review 6.  New and classic families of secreted fungal heme peroxidases.

Authors:  Martin Hofrichter; René Ullrich; Marek J Pecyna; Christiane Liers; Taina Lundell
Journal:  Appl Microbiol Biotechnol       Date:  2010-05-22       Impact factor: 4.813

7.  Mechanism of peroxidase inactivation in liquid cultures of the ligninolytic fungus pleurotus pulmonarius

Authors: 
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

Review 8.  Enzymatic delignification of plant cell wall: from nature to mill.

Authors:  Angel T Martínez; Francisco J Ruiz-Dueñas; María Jesús Martínez; José C Del Río; Ana Gutiérrez
Journal:  Curr Opin Biotechnol       Date:  2009-06-06       Impact factor: 9.740

9.  Substrate oxidation by dye-decolorizing peroxidases (DyPs) from wood- and litter-degrading agaricomycetes compared to other fungal and plant heme-peroxidases.

Authors:  Christiane Liers; Marek J Pecyna; Harald Kellner; Anja Worrich; Holger Zorn; Kari T Steffen; Martin Hofrichter; René Ullrich
Journal:  Appl Microbiol Biotechnol       Date:  2012-10-31       Impact factor: 4.813

10.  Degradation of PAHs by ligninolytic enzymes of Irpex lacteus.

Authors:  T Cajthaml; P Erbanová; A Kollmann; C Novotný; V Sasek; C Mougin
Journal:  Folia Microbiol (Praha)       Date:  2008-08-31       Impact factor: 2.099

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  33 in total

1.  Cell-free one-pot conversion of (+)-valencene to (+)-nootkatone by a unique dye-decolorizing peroxidase combined with a laccase from Funalia trogii.

Authors:  Julia Kolwek; Christoph Behrens; Diana Linke; Ulrich Krings; Ralf G Berger
Journal:  J Ind Microbiol Biotechnol       Date:  2017-12-22       Impact factor: 3.346

2.  A novel and efficient fungal delignification strategy based on versatile peroxidase for lignocellulose bioconversion.

Authors:  Wen Kong; Xiao Fu; Lei Wang; Ahmad Alhujaily; Jingli Zhang; Fuying Ma; Xiaoyu Zhang; Hongbo Yu
Journal:  Biotechnol Biofuels       Date:  2017-09-13       Impact factor: 6.040

Review 3.  Functional genomic analysis of bacterial lignin degraders: diversity in mechanisms of lignin oxidation and metabolism.

Authors:  Rommel Santiago Granja-Travez; Gabriela Felix Persinoti; Fabio M Squina; Timothy D H Bugg
Journal:  Appl Microbiol Biotechnol       Date:  2020-02-22       Impact factor: 4.813

Review 4.  DyP-type peroxidases: a promising and versatile class of enzymes.

Authors:  Dana I Colpa; Marco W Fraaije; Edwin van Bloois
Journal:  J Ind Microbiol Biotechnol       Date:  2013-11-09       Impact factor: 3.346

5.  Enzyme Activities of Two Recombinant Heme-Containing Peroxidases, TvDyP1 and TvVP2, Identified from the Secretome of Trametes versicolor.

Authors:  Sawsan Amara; Thomas Perrot; David Navarro; Aurélie Deroy; Amine Benkhelfallah; Amani Chalak; Marianne Daou; Didier Chevret; Craig B Faulds; Jean-Guy Berrin; Mélanie Morel-Rouhier; Eric Gelhaye; Eric Record
Journal:  Appl Environ Microbiol       Date:  2018-04-02       Impact factor: 4.792

Review 6.  Biocatalytic portfolio of Basidiomycota.

Authors:  Claudia Schmidt-Dannert
Journal:  Curr Opin Chem Biol       Date:  2016-01-23       Impact factor: 8.822

7.  A novel bacterial class V dye-decolourizing peroxidase from the extremophile Deinococcus radiodurans: cloning, expression optimization, purification, crystallization, initial characterization and X-ray diffraction analysis.

Authors:  Kelly Stefany Tuna Frade; Andreia Cecília Pimenta Fernandes; Celia Marisa Silveira; Carlos Frazão; Elin Moe
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-06-26       Impact factor: 1.056

8.  Deciphering lignocellulose deconstruction by the white rot fungus Irpex lacteus based on genomic and transcriptomic analyses.

Authors:  Xing Qin; Xiaoyun Su; Huiying Luo; Rui Ma; Bin Yao; Fuying Ma
Journal:  Biotechnol Biofuels       Date:  2018-03-02       Impact factor: 6.040

9.  Characterization of a Dye-Decolorizing Peroxidase from Irpex lacteus Expressed in Escherichia coli: An Enzyme with Wide Substrate Specificity Able to Transform Lignosulfonates.

Authors:  Laura Isabel de Eugenio; Rosa Peces-Pérez; Dolores Linde; Alicia Prieto; Jorge Barriuso; Francisco Javier Ruiz-Dueñas; María Jesús Martínez
Journal:  J Fungi (Basel)       Date:  2021-04-22

Review 10.  DyP-Type Peroxidases: Recent Advances and Perspectives.

Authors:  Yasushi Sugano; Toru Yoshida
Journal:  Int J Mol Sci       Date:  2021-05-24       Impact factor: 5.923

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