Literature DB >> 29453263

Enzyme Activities of Two Recombinant Heme-Containing Peroxidases, TvDyP1 and TvVP2, Identified from the Secretome of Trametes versicolor.

Sawsan Amara1, Thomas Perrot2, David Navarro3,4, Aurélie Deroy2, Amine Benkhelfallah3, Amani Chalak3, Marianne Daou3, Didier Chevret5, Craig B Faulds3, Jean-Guy Berrin3, Mélanie Morel-Rouhier2, Eric Gelhaye2, Eric Record1.   

Abstract

Trametesversicolor is a wood-inhabiting agaricomycete known for its ability to cause strong white-rot decay on hardwood and for its high tolerance of phenolic compounds. The goal of the present work was to gain insights into the molecular biology and biochemistry of the heme-including class II and dye-decolorizing peroxidases secreted by this fungus. Proteomic analysis of the secretome of T. versicolor BRFM 1218 grown on oak wood revealed a set of 200 secreted proteins, among which were the dye-decolorizing peroxidase TvDyP1 and the versatile peroxidase TvVP2. Both peroxidases were heterologously produced in Escherichia coli, biochemically characterized, and tested for the ability to oxidize complex substrates. Both peroxidases were found to be active against several substrates under acidic conditions, and TvDyP1 was very stable over a relatively large pH range of 2.0 to 6.0, while TvVP2 was more stable at pH 5.0 to 6.0 only. The thermostability of both enzymes was also tested, and TvDyP1 was globally found to be more stable than TvVP2. After 180 min of incubation at temperatures ranging from 30 to 50°C, the activity of TvVP2 drastically decreased, with 10 to 30% of the initial activity retained. Under the same conditions, TvDyP1 retained 20 to 80% of its enzyme activity. The two proteins were catalytically characterized, and TvVP2 was shown to accept a wider range of reducing substrates than TvDyP1. Furthermore, both enzymes were found to be active against two flavonoids, quercetin and catechin, found in oak wood, with TvVP2 displaying more rapid oxidation of the two compounds. They were tested for the ability to decolorize five industrial dyes, and TvVP2 presented a greater ability to oxidize and decolorize the dye substrates than TvDyP1.IMPORTANCETrametesversicolor is a wood-inhabiting agaricomycete known for its ability to cause strong white-rot decay on hardwood and for its high tolerance of phenolic compounds. Among white-rot fungi, the basidiomycete T. versicolor has been extensively studied for its ability to degrade wood, specifically lignin, thanks to an extracellular oxidative enzymatic system. The corresponding oxidative system was previously studied in several works for classical lignin and manganese peroxidases, and in this study, two new components of the oxidative system of T. versicolor, one dye-decolorizing peroxidase and one versatile peroxidase, were biochemically characterized in depth and compared to other fungal peroxidases.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  Trametes versicolor; class II heme peroxidase; dye-decolorizing peroxidase; fungal secretome; versatile peroxidase; white-rot fungus

Mesh:

Substances:

Year:  2018        PMID: 29453263      PMCID: PMC5881066          DOI: 10.1128/AEM.02826-17

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  45 in total

Review 1.  Suicide inactivation of peroxidases and the challenge of engineering more robust enzymes.

Authors:  Brenda Valderrama; Marcela Ayala; Rafael Vazquez-Duhalt
Journal:  Chem Biol       Date:  2002-05

2.  The oxidation of natural flavonoid quercetin.

Authors:  Romana Sokolová; Šárka Ramešová; Ilaria Degano; Magdaléna Hromadová; Miroslav Gál; Ján Žabka
Journal:  Chem Commun (Camb)       Date:  2012-02-22       Impact factor: 6.222

3.  Heterologous expression and physicochemical characterization of a fungal dye-decolorizing peroxidase from Auricularia auricula-judae.

Authors:  Dolores Linde; Cristina Coscolín; Christiane Liers; Martin Hofrichter; Angel T Martínez; Francisco J Ruiz-Dueñas
Journal:  Protein Expr Purif       Date:  2014-08-18       Impact factor: 1.650

4.  Purification and characterization of two DyP isozymes from Thanatephorus cucumeris Dec 1 specifically expressed in an air-membrane surface bioreactor.

Authors:  Takuya Shimokawa; Makoto Shoda; Yasushi Sugano
Journal:  J Biosci Bioeng       Date:  2009-02       Impact factor: 2.894

Review 5.  A critical review of the application of white rot fungus to environmental pollution control.

Authors:  Dawen Gao; Lina Du; Jiaoling Yang; Wei-Min Wu; Hong Liang
Journal:  Crit Rev Biotechnol       Date:  2010-03       Impact factor: 8.429

6.  Catechin metabolism: glutathione conjugate formation catalyzed by tyrosinase, peroxidase, and cytochrome p450.

Authors:  M Y Moridani; H Scobie; P Salehi; P J O'Brien
Journal:  Chem Res Toxicol       Date:  2001-07       Impact factor: 3.739

Review 7.  New and classic families of secreted fungal heme peroxidases.

Authors:  Martin Hofrichter; René Ullrich; Marek J Pecyna; Christiane Liers; Taina Lundell
Journal:  Appl Microbiol Biotechnol       Date:  2010-05-22       Impact factor: 4.813

8.  Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on 10 sequenced genomes.

Authors:  Francisco J Ruiz-Dueñas; Taina Lundell; Dimitrios Floudas; Laszlo G Nagy; José M Barrasa; David S Hibbett; Angel T Martínez
Journal:  Mycologia       Date:  2013-08-06       Impact factor: 2.696

9.  Substrate oxidation by dye-decolorizing peroxidases (DyPs) from wood- and litter-degrading agaricomycetes compared to other fungal and plant heme-peroxidases.

Authors:  Christiane Liers; Marek J Pecyna; Harald Kellner; Anja Worrich; Holger Zorn; Kari T Steffen; Martin Hofrichter; René Ullrich
Journal:  Appl Microbiol Biotechnol       Date:  2012-10-31       Impact factor: 4.813

10.  Characterization of dye-decolorizing peroxidases from Rhodococcus jostii RHA1.

Authors:  Joseph N Roberts; Rahul Singh; Jason C Grigg; Michael E P Murphy; Timothy D H Bugg; Lindsay D Eltis
Journal:  Biochemistry       Date:  2011-05-19       Impact factor: 3.162

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  4 in total

1.  Identification of Copper-Containing Oxidoreductases in the Secretomes of Three Colletotrichum Species with a Focus on Copper Radical Oxidases for the Biocatalytic Production of Fatty Aldehydes.

Authors:  David Ribeaucourt; Safwan Saker; David Navarro; Bastien Bissaro; Elodie Drula; Lydie Oliveira Correia; Mireille Haon; Sacha Grisel; Nicolas Lapalu; Bernard Henrissat; Richard J O'Connell; Fanny Lambert; Mickaël Lafond; Jean-Guy Berrin
Journal:  Appl Environ Microbiol       Date:  2021-10-06       Impact factor: 5.005

2.  Exploring the Diversity of Fungal DyPs in Mangrove Soils to Produce and Characterize Novel Biocatalysts.

Authors:  Amal Ben Ayed; Geoffroy Saint-Genis; Laurent Vallon; Dolores Linde; Annick Turbé-Doan; Mireille Haon; Marianne Daou; Emmanuel Bertrand; Craig B Faulds; Giuliano Sciara; Martino Adamo; Roland Marmeisse; Sophie Comtet-Marre; Pierre Peyret; Danis Abrouk; Francisco J Ruiz-Dueñas; Cyril Marchand; Mylène Hugoni; Patricia Luis; Tahar Mechichi; Eric Record
Journal:  J Fungi (Basel)       Date:  2021-04-21

3.  Differential regulation of Pleurotus ostreatus dye peroxidases gene expression in response to dyes and potential application of recombinant Pleos-DyP1 in decolorization.

Authors:  J Cuamatzi-Flores; E Esquivel-Naranjo; S Nava-Galicia; A López-Munguía; A Arroyo-Becerra; M A Villalobos-López; M Bibbins-Martínez
Journal:  PLoS One       Date:  2019-01-04       Impact factor: 3.240

4.  A DyP-Type Peroxidase of Pleurotus sapidus with Alkene Cleaving Activity.

Authors:  Nina-Katharina Krahe; Ralf G Berger; Franziska Ersoy
Journal:  Molecules       Date:  2020-03-27       Impact factor: 4.411

  4 in total

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