Literature DB >> 23660027

Visualizing the human connectome.

Daniel S Margulies1, Joachim Böttger, Aimi Watanabe, Krzysztof J Gorgolewski.   

Abstract

Innovations in data visualization punctuate the landmark advances in human connectome research since its beginnings. From tensor glyphs for diffusion-weighted imaging, to advanced rendering of anatomical tracts, to more recent graph-based representations of functional connectivity data, many of the ways we have come to understand the human connectome are through the intuitive insight these visualizations enable. Nonetheless, several unresolved problems persist. For example, probabilistic tractography lacks the visual appeal of its deterministic equivalent, multimodal representations require extreme levels of data reduction, and rendering the full connectome within an anatomical space makes the contents cluttered and unreadable. In part, these challenges require compromises between several tensions that determine connectome visualization practice, such as prioritizing anatomic or connectomic information, aesthetic appeal or information content, and thoroughness or readability. To illustrate the ongoing negotiation between these priorities, we provide an overview of various visualization methods that have evolved for anatomical and functional connectivity data. We then describe interactive visualization tools currently available for use in research, and we conclude with concerns and developments in the presentation of connectivity results.
Copyright © 2013. Published by Elsevier Inc.

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Year:  2013        PMID: 23660027     DOI: 10.1016/j.neuroimage.2013.04.111

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  28 in total

1.  An Uncertainty Visual Analytics Framework for fMRI Functional Connectivity.

Authors:  Michael de Ridder; Karsten Klein; Jean Yang; Pengyi Yang; Jim Lagopoulos; Ian Hickie; Max Bennett; Jinman Kim
Journal:  Neuroinformatics       Date:  2019-04

2.  The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services.

Authors:  Paolo Avesani; Brent McPherson; Soichi Hayashi; Cesar F Caiafa; Robert Henschel; Eleftherios Garyfallidis; Lindsey Kitchell; Daniel Bullock; Andrew Patterson; Emanuele Olivetti; Olaf Sporns; Andrew J Saykin; Lei Wang; Ivo Dinov; David Hancock; Bradley Caron; Yiming Qian; Franco Pestilli
Journal:  Sci Data       Date:  2019-05-23       Impact factor: 6.444

3.  Computational and mathematical methods in brain atlasing.

Authors:  Wieslaw L Nowinski
Journal:  Neuroradiol J       Date:  2017-11-03

4.  Integrated Visualization of Human Brain Connectome Data.

Authors:  Huang Li; Shiaofen Fang; Joaquin Goni; Joey A Contreras; Yanhua Liang; Chengtao Cai; John D West; Shannon L Risacher; Yang Wang; Olaf Sporns; Andrew J Saykin; Li Shen
Journal:  Brain Inform Health (2015)       Date:  2015-08-21

Review 5.  The structural connectome in children: basic concepts, how to build it, and synopsis of challenges for the developing pediatric brain.

Authors:  Avner Meoded; Thierry A G M Huisman; Maria Grazia Sacco Casamassima; George I Jallo; Andrea Poretti
Journal:  Neuroradiology       Date:  2017-04-05       Impact factor: 2.804

6.  A multivariate distance-based analytic framework for connectome-wide association studies.

Authors:  Zarrar Shehzad; Clare Kelly; Philip T Reiss; R Cameron Craddock; John W Emerson; Katie McMahon; David A Copland; F Xavier Castellanos; Michael P Milham
Journal:  Neuroimage       Date:  2014-02-28       Impact factor: 6.556

Review 7.  Functional connectomics from resting-state fMRI.

Authors:  Stephen M Smith; Diego Vidaurre; Christian F Beckmann; Matthew F Glasser; Mark Jenkinson; Karla L Miller; Thomas E Nichols; Emma C Robinson; Gholamreza Salimi-Khorshidi; Mark W Woolrich; Deanna M Barch; Kamil Uğurbil; David C Van Essen
Journal:  Trends Cogn Sci       Date:  2013-11-12       Impact factor: 20.229

Review 8.  Dynamic functional connectivity: promise, issues, and interpretations.

Authors:  R Matthew Hutchison; Thilo Womelsdorf; Elena A Allen; Peter A Bandettini; Vince D Calhoun; Maurizio Corbetta; Stefania Della Penna; Jeff H Duyn; Gary H Glover; Javier Gonzalez-Castillo; Daniel A Handwerker; Shella Keilholz; Vesa Kiviniemi; David A Leopold; Francesco de Pasquale; Olaf Sporns; Martin Walter; Catie Chang
Journal:  Neuroimage       Date:  2013-05-24       Impact factor: 6.556

9.  BrainNet Viewer: a network visualization tool for human brain connectomics.

Authors:  Mingrui Xia; Jinhui Wang; Yong He
Journal:  PLoS One       Date:  2013-07-04       Impact factor: 3.240

10.  Blockwise Human Brain Network Visual Comparison Using NodeTrix Representation.

Authors:  Xinsong Yang; Lei Shi; Madelaine Daianu; Hanghang Tong; Qingsong Liu; Paul Thompson
Journal:  IEEE Trans Vis Comput Graph       Date:  2016-08-05       Impact factor: 4.579

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