Literature DB >> 29096578

Computational and mathematical methods in brain atlasing.

Wieslaw L Nowinski1.   

Abstract

Brain atlases have a wide range of use from education to research to clinical applications. Mathematical methods as well as computational methods and tools play a major role in the process of brain atlas building and developing atlas-based applications. Computational methods and tools cover three areas: dedicated editors for brain model creation, brain navigators supporting multiple platforms, and atlas-assisted specific applications. Mathematical methods in atlas building and developing atlas-aided applications deal with problems in image segmentation, geometric body modelling, physical modelling, atlas-to-scan registration, visualisation, interaction and virtual reality. Here I overview computational and mathematical methods in atlas building and developing atlas-assisted applications, and share my contribution to and experience in this field.

Keywords:  Brain atlasing; computational methods; computational tools; mathematical methods

Mesh:

Year:  2017        PMID: 29096578      PMCID: PMC5703143          DOI: 10.1177/1971400917740362

Source DB:  PubMed          Journal:  Neuroradiol J        ISSN: 1971-4009


  81 in total

1.  Robust midsagittal plane extraction from normal and pathological 3-D neuroradiology images.

Authors:  Y Liu; R T Collins; W E Rothfus
Journal:  IEEE Trans Med Imaging       Date:  2001-03       Impact factor: 10.048

2.  Dorsoventral extension of the talairach transformation and its automatic calculation for magnetic resonance neuroimages.

Authors:  Wieslaw L Nowinski; K N Bhanu Prakash
Journal:  J Comput Assist Tomogr       Date:  2005 Nov-Dec       Impact factor: 1.826

3.  Geometric modeling of the human normal cerebral arterial system.

Authors:  Ihar Volkau; Weili Zheng; Rafail Baimouratov; Aamer Aziz; Wieslaw L Nowinski
Journal:  IEEE Trans Med Imaging       Date:  2005-04       Impact factor: 10.048

4.  Fast Talairach Transformation for magnetic resonance neuroimages.

Authors:  Wieslaw L Nowinski; Guoyu Qian; K N Bhanu Prakash; Qingmao Hu; Aamer Aziz
Journal:  J Comput Assist Tomogr       Date:  2006 Jul-Aug       Impact factor: 1.826

Review 5.  The Brain Bench: virtual tools for stereotactic frame neurosurgery.

Authors:  L Serra; W L Nowinski; T Poston; N Hern; L C Meng; C G Guan; P K Pillay
Journal:  Med Image Anal       Date:  1997-09       Impact factor: 8.545

Review 6.  Visualizing the human connectome.

Authors:  Daniel S Margulies; Joachim Böttger; Aimi Watanabe; Krzysztof J Gorgolewski
Journal:  Neuroimage       Date:  2013-05-06       Impact factor: 6.556

7.  Three-dimensional interactive and stereotactic human brain atlas of white matter tracts.

Authors:  Wieslaw L Nowinski; Beng Choon Chua; Guo Liang Yang; Guo Yu Qian
Journal:  Neuroinformatics       Date:  2012-01

Review 8.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

9.  Fast and robust multi-atlas segmentation of brain magnetic resonance images.

Authors:  Jyrki Mp Lötjönen; Robin Wolz; Juha R Koikkalainen; Lennart Thurfjell; Gunhild Waldemar; Hilkka Soininen; Daniel Rueckert
Journal:  Neuroimage       Date:  2009-10-24       Impact factor: 6.556

10.  Population-based Stroke Atlas for outcome prediction: method and preliminary results for ischemic stroke from CT.

Authors:  Wieslaw L Nowinski; Varsha Gupta; Guoyu Qian; Wojciech Ambrosius; Radoslaw Kazmierski
Journal:  PLoS One       Date:  2014-08-14       Impact factor: 3.240

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  3 in total

1.  Professor Wieslaw Nowinski: 25 years of contribution to the development of digital brain atlases.

Authors:  Jaroslaw Krejza
Journal:  Neuroradiol J       Date:  2017-12

Review 2.  Human brain atlasing: past, present and future.

Authors:  Wieslaw L Nowinski
Journal:  Neuroradiol J       Date:  2017-11-03

3.  Human Brain Atlases in Stroke Management.

Authors:  Wieslaw L Nowinski
Journal:  Neuroinformatics       Date:  2020-10
  3 in total

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