Literature DB >> 27514058

Blockwise Human Brain Network Visual Comparison Using NodeTrix Representation.

Xinsong Yang1, Lei Shi1, Madelaine Daianu2, Hanghang Tong3, Qingsong Liu1, Paul Thompson2.   

Abstract

Visually comparing human brain networks from multiple population groups serves as an important task in the field of brain connectomics. The commonly used brain network representation, consisting of nodes and edges, may not be able to reveal the most compelling network differences when the reconstructed networks are dense and homogeneous. In this paper, we leveraged the block information on the Region Of Interest (ROI) based brain networks and studied the problem of blockwise brain network visual comparison. An integrated visual analytics framework was proposed. In the first stage, a two-level ROI block hierarchy was detected by optimizing the anatomical structure and the predictive comparison performance simultaneously. In the second stage, the NodeTrix representation was adopted and customized to visualize the brain network with block information. We conducted controlled user experiments and case studies to evaluate our proposed solution. Results indicated that our visual analytics method outperformed the commonly used node-link graph and adjacency matrix design in the blockwise network comparison tasks. We have shown compelling findings from two real-world brain network data sets, which are consistent with the prior connectomics studies.

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Mesh:

Year:  2016        PMID: 27514058      PMCID: PMC5293509          DOI: 10.1109/TVCG.2016.2598472

Source DB:  PubMed          Journal:  IEEE Trans Vis Comput Graph        ISSN: 1077-2626            Impact factor:   4.579


  25 in total

1.  Fused DTI/HARDI visualization.

Authors:  Vesna Prčkovska; Tim H J M Peeters; Markus van Almsick; Bart ter Haar Romeny; Anna Vilanova
Journal:  IEEE Trans Vis Comput Graph       Date:  2011-10       Impact factor: 4.579

2.  NeuroLines: A Subway Map Metaphor for Visualizing Nanoscale Neuronal Connectivity.

Authors:  Ali K Al-Awami; Johanna Beyer; Hendrik Strobelt; Narayanan Kasthuri; Jeff W Lichtman; Hanspeter Pfister; Markus Hadwiger
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-12       Impact factor: 4.579

3.  Exploration of the Brain's White Matter Structure through Visual Abstraction and Multi-Scale Local Fiber Tract Contraction.

Authors:  Maarten H Everts; Eric Begue; Henk Bekker; Jos B T M Roerdink; Tobias Isenberg
Journal:  IEEE Trans Vis Comput Graph       Date:  2015-07       Impact factor: 4.579

4.  NodeTrix: a hybrid visualization of social networks.

Authors:  Nathalie Henry; Jean-Daniel Fekete; Michael J McGuffin
Journal:  IEEE Trans Vis Comput Graph       Date:  2007 Nov-Dec       Impact factor: 4.579

Review 5.  Visualizing the human connectome.

Authors:  Daniel S Margulies; Joachim Böttger; Aimi Watanabe; Krzysztof J Gorgolewski
Journal:  Neuroimage       Date:  2013-05-06       Impact factor: 6.556

6.  Prefrontal cortex involvement in creative problem solving in middle adolescence and adulthood.

Authors:  Sietske W Kleibeuker; P Cédric M P Koolschijn; Dietsje D Jolles; Margot A Schel; Carsten K W De Dreu; Eveline A Crone
Journal:  Dev Cogn Neurosci       Date:  2013-03-16       Impact factor: 6.464

7.  Molecular, structural, and functional characterization of Alzheimer's disease: evidence for a relationship between default activity, amyloid, and memory.

Authors:  Randy L Buckner; Abraham Z Snyder; Benjamin J Shannon; Gina LaRossa; Rimmon Sachs; Anthony F Fotenos; Yvette I Sheline; William E Klunk; Chester A Mathis; John C Morris; Mark A Mintun
Journal:  J Neurosci       Date:  2005-08-24       Impact factor: 6.167

8.  Genetics of brain fiber architecture and intellectual performance.

Authors:  Ming-Chang Chiang; Marina Barysheva; David W Shattuck; Agatha D Lee; Sarah K Madsen; Christina Avedissian; Andrea D Klunder; Arthur W Toga; Katie L McMahon; Greig I de Zubicaray; Margaret J Wright; Anuj Srivastava; Nikolay Balov; Paul M Thompson
Journal:  J Neurosci       Date:  2009-02-18       Impact factor: 6.167

9.  Progressive structural brain abnormalities and their relationship to clinical outcome: a longitudinal magnetic resonance imaging study early in schizophrenia.

Authors:  Beng-Choon Ho; Nancy C Andreasen; Peg Nopoulos; Stephan Arndt; Vincent Magnotta; Michael Flaum
Journal:  Arch Gen Psychiatry       Date:  2003-06

Review 10.  Frontal lobe neurology and the creative mind.

Authors:  Leonardo C de Souza; Henrique C Guimarães; Antônio L Teixeira; Paulo Caramelli; Richard Levy; Bruno Dubois; Emmanuelle Volle
Journal:  Front Psychol       Date:  2014-07-23
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  3 in total

1.  Visualization of Neuronal Structures in Wide-Field Microscopy Brain Images.

Authors:  Saeed Boorboor; Mala Ananth; David Talmage; Arie Kaufman
Journal:  IEEE Trans Vis Comput Graph       Date:  2018-08-20       Impact factor: 4.579

2.  Brain explorer for connectomic analysis.

Authors:  Huang Li; Shiaofen Fang; Joey A Contreras; John D West; Shannon L Risacher; Yang Wang; Olaf Sporns; Andrew J Saykin; Joaquín Goñi; Li Shen
Journal:  Brain Inform       Date:  2017-08-23

Review 3.  A review and outlook on visual analytics for uncertainties in functional magnetic resonance imaging.

Authors:  Michael de Ridder; Karsten Klein; Jinman Kim
Journal:  Brain Inform       Date:  2018-07-03
  3 in total

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