Literature DB >> 27171688

Integrated Visualization of Human Brain Connectome Data.

Huang Li1, Shiaofen Fang2, Joaquin Goni3, Joey A Contreras3, Yanhua Liang4, Chengtao Cai5, John D West3, Shannon L Risacher3, Yang Wang3, Olaf Sporns6, Andrew J Saykin3, Li Shen1.   

Abstract

Visualization plays a vital role in the analysis of multi-modal neuroimaging data. A major challenge in neuroimaging visualization is how to integrate structural, functional and connectivity data to form a comprehensive visual context for data exploration, quality control, and hypothesis discovery. We develop a new integrated visualization solution for brain imaging data by combining scientific and information visualization techniques within the context of the same anatomic structure. New surface texture techniques are developed to map non-spatial attributes onto the brain surfaces from MRI scans. Two types of non-spatial information are represented: (1) time-series data from resting-state functional MRI measuring brain activation; (2) network properties derived from structural connectivity data for different groups of subjects, which may help guide the detection of differentiation features. Through visual exploration, this integrated solution can help identify brain regions with highly correlated functional activations as well as their activation patterns. Visual detection of differentiation features can also potentially discover image based phenotypic biomarkers for brain diseases.

Entities:  

Keywords:  Brain connectome; DTI; MRI; fMRI; visualization

Year:  2015        PMID: 27171688      PMCID: PMC4860269          DOI: 10.1007/978-3-319-23344-4_29

Source DB:  PubMed          Journal:  Brain Inform Health (2015)


  16 in total

1.  LineAO--improved three-dimensional line rendering.

Authors:  Sebastian Eichelbaum; Mario Hlawitschka; Gerik Scheuermann
Journal:  IEEE Trans Vis Comput Graph       Date:  2013-03       Impact factor: 4.579

2.  Negative edges and soft thresholding in complex network analysis of resting state functional connectivity data.

Authors:  Adam J Schwarz; John McGonigle
Journal:  Neuroimage       Date:  2010-12-29       Impact factor: 6.556

3.  Undirected graphs of frequency-dependent functional connectivity in whole brain networks.

Authors:  Raymond Salvador; John Suckling; Christian Schwarzbauer; Ed Bullmore
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-05-29       Impact factor: 6.237

4.  Hybrid visualization for white matter tracts using triangle strips and point sprites.

Authors:  Dorit Merhof; Markus Sonntag; Frank Enders; Christopher Nimsky; Peter Hastreiter; Günther Greiner
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

5.  Complex network measures of brain connectivity: uses and interpretations.

Authors:  Mikail Rubinov; Olaf Sporns
Journal:  Neuroimage       Date:  2009-10-09       Impact factor: 6.556

Review 6.  Visualizing the human connectome.

Authors:  Daniel S Margulies; Joachim Böttger; Aimi Watanabe; Krzysztof J Gorgolewski
Journal:  Neuroimage       Date:  2013-05-06       Impact factor: 6.556

7.  Optimization of seed density in DTI tractography for structural networks.

Authors:  Hu Cheng; Yang Wang; Jinhua Sheng; Olaf Sporns; William G Kronenberger; Vincent P Mathews; Tom A Hummer; Andrew J Saykin
Journal:  J Neurosci Methods       Date:  2011-09-29       Impact factor: 2.390

Review 8.  Human connectomics.

Authors:  Timothy E J Behrens; Olaf Sporns
Journal:  Curr Opin Neurobiol       Date:  2011-09-09       Impact factor: 6.627

9.  A resilient, low-frequency, small-world human brain functional network with highly connected association cortical hubs.

Authors:  Sophie Achard; Raymond Salvador; Brandon Whitcher; John Suckling; Ed Bullmore
Journal:  J Neurosci       Date:  2006-01-04       Impact factor: 6.167

10.  Mapping human whole-brain structural networks with diffusion MRI.

Authors:  Patric Hagmann; Maciej Kurant; Xavier Gigandet; Patrick Thiran; Van J Wedeen; Reto Meuli; Jean-Philippe Thiran
Journal:  PLoS One       Date:  2007-07-04       Impact factor: 3.240

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  1 in total

1.  Functional connectome of arousal and motor brainstem nuclei in living humans by 7 Tesla resting-state fMRI.

Authors:  Kavita Singh; Simone Cauzzo; María Guadalupe García-Gomar; Matthew Stauder; Nicola Vanello; Claudio Passino; Marta Bianciardi
Journal:  Neuroimage       Date:  2022-01-12       Impact factor: 6.556

  1 in total

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