Literature DB >> 23640729

Impact of correlation on predictive ability of biomarkers.

Olga V Demler1, Michael J Pencina, Ralph B D'Agostino.   

Abstract

In this paper, we investigate how the correlation structure of independent variables affects the discrimination of risk prediction model. Using multivariate normal data and binary outcome, we prove that zero correlation among predictors is often detrimental for discrimination in a risk prediction model and negatively correlated predictors with positive effect sizes are beneficial. A very high multiple R-squared from regressing the new predictor on the old ones can also be beneficial. As a practical guide to new variable selection, we recommend to select predictors that have negative correlation with the risk score based on the existing variables. This step is easy to implement even when the number of new predictors is large. We illustrate our results by using real-life Framingham data suggesting that the conclusions hold outside of normality. The findings presented in this paper might be useful for preliminary selection of potentially important predictors, especially is situations where the number of predictors is large.
Copyright © 2013 John Wiley & Sons, Ltd.

Entities:  

Keywords:  AUC; correlation; discrimination; linear discriminant analysis; logistic regression; risk prediction model

Mesh:

Substances:

Year:  2013        PMID: 23640729      PMCID: PMC4177016          DOI: 10.1002/sim.5824

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  10 in total

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2.  Equivalence of improvement in area under ROC curve and linear discriminant analysis coefficient under assumption of normality.

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4.  Prediction of coronary heart disease using risk factor categories.

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Journal:  Circulation       Date:  1998-05-12       Impact factor: 29.690

5.  The meaning and use of the area under a receiver operating characteristic (ROC) curve.

Authors:  J A Hanley; B J McNeil
Journal:  Radiology       Date:  1982-04       Impact factor: 11.105

6.  Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.

Authors:  T R Golub; D K Slonim; P Tamayo; C Huard; M Gaasenbeek; J P Mesirov; H Coller; M L Loh; J R Downing; M A Caligiuri; C D Bloomfield; E S Lander
Journal:  Science       Date:  1999-10-15       Impact factor: 47.728

7.  Projecting individualized probabilities of developing breast cancer for white females who are being examined annually.

Authors:  M H Gail; L A Brinton; D P Byar; D K Corle; S B Green; C Schairer; J J Mulvihill
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8.  General cardiovascular risk profile for use in primary care: the Framingham Heart Study.

Authors:  Ralph B D'Agostino; Ramachandran S Vasan; Michael J Pencina; Philip A Wolf; Mark Cobain; Joseph M Massaro; William B Kannel
Journal:  Circulation       Date:  2008-01-22       Impact factor: 29.690

9.  Cardiovascular disease risk profiles.

Authors:  K M Anderson; P M Odell; P W Wilson; W B Kannel
Journal:  Am Heart J       Date:  1991-01       Impact factor: 4.749

10.  Projecting individualized absolute invasive breast cancer risk in African American women.

Authors:  Mitchell H Gail; Joseph P Costantino; David Pee; Melissa Bondy; Lisa Newman; Mano Selvan; Garnet L Anderson; Kathleen E Malone; Polly A Marchbanks; Worta McCaskill-Stevens; Sandra A Norman; Michael S Simon; Robert Spirtas; Giske Ursin; Leslie Bernstein
Journal:  J Natl Cancer Inst       Date:  2007-11-27       Impact factor: 13.506

  10 in total
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Journal:  Neurology       Date:  2014-04-23       Impact factor: 9.910

2.  Microsimulation model to predict incremental value of biomarkers added to prognostic models.

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3.  Discovery of novel plasma biomarkers for future incident venous thromboembolism by untargeted synchronous precursor selection mass spectrometry proteomics.

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4.  Impact of correlation of predictors on discrimination of risk models in development and external populations.

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Journal:  BMC Med Res Methodol       Date:  2017-04-19       Impact factor: 4.615

Review 5.  Revisiting biomarker discovery by plasma proteomics.

Authors:  Philipp E Geyer; Lesca M Holdt; Daniel Teupser; Matthias Mann
Journal:  Mol Syst Biol       Date:  2017-09-26       Impact factor: 11.429

6.  Tyrosine hydroxylase and β2-adrenergic receptor expression in leukocytes of spontaneously hypertensive rats: putative peripheral markers of central sympathetic activity.

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  6 in total

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